FFCP PHASE1:Mm9::chr4:116549842..116549865,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:116549842..116549865,+
|short_description=p3@Zswim5
|description=CAGE_peak_3_at_Zswim5_5end
|association_with_transcript=-115bp_to_ENSMUST00000044823_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74464 | |EntrezGene=74464 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q80TC6 | |UniProt=Q80TC6 | ||
|association_with_transcript=-115bp_to_ENSMUST00000044823_5end | |||
|cluster_id=chr4:116549842..116549865,+ | |||
|description=CAGE_peak_3_at_Zswim5_5end | |||
|id=chr4:116549842..116549865,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.11e-07!9;CL:0002251!2.11e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.45e-14,9;CL:0002251,1.45e-14,9;CL:0000075,4.64e-12,7;CL:0000239,8.59e-11,6;CL:0000677,8.59e-11,6;CL:0000584,8.59e-11,6;CL:0000066,4.38e-10,25;CL:0002076,8.04e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.95e-17!43;UBERON:0000344!3.97e-10!15;UBERON:0001242!7.63e-10!13;UBERON:0000060!7.63e-10!13;UBERON:0001262!7.63e-10!13;UBERON:0004786!7.63e-10!13;UBERON:0005409!1.61e-09!59;UBERON:0000485!2.17e-08!11;UBERON:0000033!2.55e-08!63;UBERON:0000481!1.02e-07!230;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0003350!2.11e-07!9;UBERON:0004808!2.11e-07!9;UBERON:0001277!2.11e-07!9;UBERON:0003056!6.59e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-29,31;UBERON:0001242,5.43e-20,13;UBERON:0001262,5.43e-20,13;UBERON:0004786,5.43e-20,13;UBERON:0005409,7.96e-17,47;UBERON:0000344,8.37e-17,15;UBERON:0000485,9.28e-17,11;UBERON:0003350,1.45e-14,9;UBERON:0004808,1.45e-14,9;UBERON:0001277,1.45e-14,9;UBERON:0004923,4.19e-09,24;UBERON:0002108,6.18e-07,4 | |||
|phase1_expression=1.28119077683835,4.53668029931169,6.82498859084304,11.7961042409664,11.520601788766,3.3575854382378,2.33612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0.639969691173627,0.91763712426868,4.01962374880514,3.4460959692726,2.80112602491656,2.85035129184561,5.04060259519861,1.10865255327652,0,0,0,1.73310971850765,1.66234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,2.53532561402472,0,0,0,0,0,0,0,1.14058573539325,2.16009501330705,0.841299845405528,0.285650984403804,0.220868540951614,1.10241719293459,0.766763768145891,3.67687514644008,0,0.510749352340751,0.921639199537461,0.791317726381163,0.640413505216868,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.569486723196412,0.931997229126503,0.227178579999552,0.151143120213571,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,0.561777680527007,0,0,0,2.11265129665021,0,0,0,0.432982082022428,0,0,1.1418387971906,0,0.29688427812965,0,0.913396434936424,0.691846491768175,0.301445281105245,1.29347577849275,0.502666365318702,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,3.0654846625031,0.11981512450592,0,0,0.748953197024114,0.457500602818626,0.125654352112864,1.39059456153821,0.767146371990992,1.45451631191692,0.324482526135515,0.407357455401265,0.497627882440372,0,0.420883711772948,1.43132487258974,0.919608417733892,1.44049703844279,0.60281927134286,0.816437989815934,0.896796041993948,0.937017245597288,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0,0.946978942340841,0.787056926989615,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0,0,0.486412857275134,0.292399974850665,0.439100230582101,0.805238512562231,0.630869845692382,1.13195073617213,4.62586296177317,1.85115396664481,0,0,0.644337306610467,1.00841762311671,1.33426826306922,1.90225626112559,1.89811624617805,2.14108641141214,1.50801125280162,0.795825888164603,1.36474860983384,2.69645822596266,2.80979464837102,2.19055400579804,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.581857461502877,0.98190147846446,0.505892296994058,1.18088118383682,1.09899109488962,0.987177311374404,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0,1.29327233116623,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,1.03610989119537,0,0,0,0,0.275936746304732,0.80275294993896,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0.584511715822624,1.18586333383957,1.28528526568723,0.283880170416537,0.712262414669021,0.325773918707152,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,0.377210159511796,0.295301892880773,1.84461088766356,0.775284879504663,0.727067458955011,1.78248689192361,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.18006109403131,0.776152102696527,0.643011105094777,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0,0,2.20528398054962,0,0,0.120625849856312,0,0,4.66369338607761,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.518459893167171,0.621339313086926,0,0.299033092087958,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.943734099831398,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.453460767230423,0,0.269141569828427,0,0.579568782096571,0,0.36630324853453,0.214368379079066,0,1.6942555278512,1.38097570952153,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,1.03787347584177,0.798049746802062,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0,0,0.758091635291392,0,0.377252682772152,0.280924522409647,0.256100609619477,0.114870937911227,0,1.39061191133827,1.35036454324594,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.423073039458382,0.73171189149109,0,0,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=1.28119077683835,4.53668029931169,6.82498859084304,11.7961042409664,11.520601788766,3.3575854382378,2.33612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0.639969691173627,0.91763712426868,4.01962374880514,3.4460959692726,2.80112602491656,2.85035129184561,5.04060259519861,1.10865255327652,0,0,0,1.73310971850765,1.66234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,2.53532561402472,0,0,0,0,0,0,0,1.14058573539325,2.16009501330705,0.841299845405528,0.285650984403804,0.220868540951614,1.10241719293459,0.766763768145891,3.67687514644008,0,0.510749352340751,0.921639199537461,0.791317726381163,0.640413505216868,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.569486723196412,0.931997229126503,0.227178579999552,0.151143120213571,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,0.561777680527007,0,0,0,2.11265129665021,0,0,0,0.432982082022428,0,0,1.1418387971906,0,0.29688427812965,0,0.913396434936424,0.691846491768175,0.301445281105245,1.29347577849275,0.502666365318702,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,3.0654846625031,0.11981512450592,0,0,0.748953197024114,0.457500602818626,0.125654352112864,1.39059456153821,0.767146371990992,1.45451631191692,0.324482526135515,0.407357455401265,0.497627882440372,0,0.420883711772948,1.43132487258974,0.919608417733892,1.44049703844279,0.60281927134286,0.816437989815934,0.896796041993948,0.937017245597288,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0,0.946978942340841,0.787056926989615,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0,0,0.486412857275134,0.292399974850665,0.439100230582101,0.805238512562231,0.630869845692382,1.13195073617213,4.62586296177317,1.85115396664481,0,0,0.644337306610467,1.00841762311671,1.33426826306922,1.90225626112559,1.89811624617805,2.14108641141214,1.50801125280162,0.795825888164603,1.36474860983384,2.69645822596266,2.80979464837102,2.19055400579804,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.581857461502877,0.98190147846446,0.505892296994058,1.18088118383682,1.09899109488962,0.987177311374404,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0,1.29327233116623,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,1.03610989119537,0,0,0,0,0.275936746304732,0.80275294993896,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0.584511715822624,1.18586333383957,1.28528526568723,0.283880170416537,0.712262414669021,0.325773918707152,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,0.377210159511796,0.295301892880773,1.84461088766356,0.775284879504663,0.727067458955011,1.78248689192361,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.18006109403131,0.776152102696527,0.643011105094777,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0,0,2.20528398054962,0,0,0.120625849856312,0,0,4.66369338607761,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.518459893167171,0.621339313086926,0,0.299033092087958,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.943734099831398,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.453460767230423,0,0.269141569828427,0,0.579568782096571,0,0.36630324853453,0.214368379079066,0,1.6942555278512,1.38097570952153,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,1.03787347584177,0.798049746802062,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0,0,0.758091635291392,0,0.377252682772152,0.280924522409647,0.256100609619477,0.114870937911227,0,1.39061191133827,1.35036454324594,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.423073039458382,0.73171189149109,0,0,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p3@Zswim5 | |||
}} | }} |
Latest revision as of 05:24, 26 September 2015
Short description: | p3@Zswim5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zswim5_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -115bp_to_ENSMUST00000044823_5end |
EntrezGene: | Zswim5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.45e-14 | 9 |
epithelial cell of alimentary canal | 1.45e-14 | 9 |
columnar/cuboidal epithelial cell | 4.64e-12 | 7 |
brush border epithelial cell | 8.59e-11 | 6 |
gut absorptive cell | 8.59e-11 | 6 |
enterocyte | 8.59e-11 | 6 |
epithelial cell | 4.38e-10 | 25 |
endo-epithelial cell | 8.04e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-29 | 31 |
intestinal mucosa | 5.43e-20 | 13 |
wall of intestine | 5.43e-20 | 13 |
gastrointestinal system mucosa | 5.43e-20 | 13 |
gastrointestinal system | 7.96e-17 | 47 |
mucosa | 8.37e-17 | 15 |
simple columnar epithelium | 9.28e-17 | 11 |
epithelium of mucosa | 1.45e-14 | 9 |
gastrointestinal system epithelium | 1.45e-14 | 9 |
intestinal epithelium | 1.45e-14 | 9 |
organ component layer | 4.19e-09 | 24 |
small intestine | 6.18e-07 | 4 |