Personal tools

FFCP PHASE1:Mm9::chr5:75548299..75548322,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18595
|EntrezGene=18595
|HGNC=
|HGNC=
|MCL_coexpression_id=160
|TSSclassifier=NA
|UniProt=P26618,Q8CGH8
|UniProt=P26618,Q8CGH8
|association_with_transcript=0bp_to_ENSMUST00000000476,NM_011058,uc008xua.1,uc008xub.1,uc008xuc.1_5end
|association_with_transcript=0bp_to_ENSMUST00000000476,NM_011058,uc008xua.1,uc008xub.1,uc008xuc.1_5end
|cluster_id=chr5:75548299..75548322,+
|description=CAGE_peak_3_at_Pdgfra_5end
|description=CAGE_peak_3_at_Pdgfra_5end
|id=chr5:75548299..75548322,+
|id=chr5:75548299..75548322,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!4.71e-10!333;UBERON:0005156!1.82e-09!26;UBERON:0000990!1.82e-09!26;UBERON:0003133!5.43e-09!24;UBERON:0000991!2.05e-07!18;UBERON:0005564!2.05e-07!18;UBERON:0000922!4.44e-07!328;UBERON:0000464!4.61e-07!57;UBERON:0004176!7.10e-07!17;UBERON:0009196!7.10e-07!17;UBERON:0009117!7.10e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005156,2.34e-09,26;UBERON:0000990,2.34e-09,26;UBERON:0003133,7.34e-09,24;UBERON:0000991,3.28e-07,18;UBERON:0005564,3.28e-07,18
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2263404312402,12.9762471960979,8.07605709511399,1.56478268869608,0,0,0,0.279972843250725,0,0,0,0,10.2903774414379,15.4728057566929,8.76642556871652,0.606949382578793,1.05798195854407,0,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,1.15265491596466,0.933206510776299,0.270011876663381,0.420649922702764,1.71390590642282,1.98781686856452,0.734944795289724,0.287536413054709,0,3.30347642998166,3.19218345212969,2.30409799884365,0.263772575460388,0.457438218012048,0.52091337055676,1.11673199600552,3.37657566019008,1.83357897332172,2.65165726926301,3.55929201997757,1.67759501242771,0.757261933331841,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0,1.40444420131752,0.170430322578058,1.03914401841148,0.35333957451034,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0,0,1.37020655662872,2.33044095282455,2.67195850316685,3.46970653532272,4.26251669636998,3.22861696158482,4.06951129492081,7.2904998424137,2.26199864393416,6.17987419335935,2.16899035379867,0,3.23533699894818,2.42925670306433,2.90925151881133,1.86391761218122,0.878342391034642,1.46612694769419,1.02182822083437,0,0,0,2.09706895166752,2.28750301409313,1.7591609295801,1.91206752211504,4.34716277461562,2.0778804455956,1.94689515681309,14.5630290305952,4.22983700074316,1.76905930903572,2.10441855886474,1.30120442962704,2.75882525320168,3.60124259610698,2.71268672104287,1.63287597963187,1.40925092313335,1.49922759295566,1.03481348295606,6.46703978798527,14.9393803332577,18.8267702855425,11.836569551089,13.9023624612799,9.75106066262066,16.6683530490434,10.1507476077432,0,0,0,2.07125772535502,3.28336483973535,3.6012412292203,1.65721314909647,2.95146347621106,4.31947916084659,4.41814495025775,2.95100741539581,2.33530684734339,1.31647879930784,5.08919138645195,5.18840381093477,3.80119967305864,4.83010253640311,5.90508242545636,1.89260953707715,1.9551876352064,0,1.58670339998127,2.77274725695804,4.87697010906921,3.09281907173024,1.61346819698674,2.2237804384487,1.52180500890047,1.89811624617805,2.47048432086016,1.50801125280162,1.39269530428806,4.874102177978,0,0.864552199498777,1.7922714592893,3.41402221715547,5.1411830674378,6.76246414038483,5.49858585182348,3.87904974335251,3.29638353484497,8.28398636327771,4.72352473534727,6.75094529717912,4.56569506510662,0.296452627087149,0.83422552858047,0.982794975566015,0,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,1.45921704097532,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.482443521363367,9.60716588866344,2.4633883530163,2.28150967018836,2.20668611507745,3.98973422090454,5.19269398069629,4.52282917683426,2.73187107000918,4.25614889086716,1.99318220683897,4.62418829106713,12.2897486036803,10.7064688756855,18.370430439852,0,0,0.983528546038072,2.20749397043786,1.9266070798535,3.8679856575427,14.7541450839008,7.06918596172244,0.631016438832513,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,5.81954349353901,10.1497394090335,4.72372182125371,10.0631775013247,5.30980553359851,2.91336763385978,0.906970670894253,3.01768127609437,1.47650946440386,2.76691633149535,3.10113951801865,1.81766864738753,2.49548164869305,1.8962205476149,3.16255825724996,2.06271086496374,0.680879211507576,2.70091641046965,2.19909762430683,3.42939256050548,3.19212420556092,3.21063871683727,2.96188237083818,1.8267896946876,5.86679270159276,6.14313005505079,2.64634077665954,1.97863503529776,8.7190790415789,6.03129249281559,3.46179797609096,1.14898629821543,1.1659233465194,2.22510362412612,0.512612642393558,4.12773735926445,5.55583582109135,0,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,2.84702394223022,1.82987520414164,2.48412283890143,2.29997125615916,1.31017538247707,1.34864346384821,1.90102948168273,1.83229159388821,2.59229946583586,6.83473244395618,0.56369293868419,25.5673293735204,24.4878565876504,39.0846888571536,43.5268605119954,61.1621174276617,45.4172513559068,14.7130954873664,11.2199498535511,2.17425708743405,3.16833006883652,0,7.70355818102624,3.80030541509861,1.29920822977795,0.895133478337407,0,0.480781798079875,0.590758108698309,0.403865799792591,0.228620419965,0.504130925684203,0.292373642219257,0.384847366561318,0.116876902181569,2.26730383615211,0,0,0,5.40930863290133,8.25802891985201,8.79127796482872,3.00115730710692,0.501572104035363,2.82375921308533,1.38097570952153,1.71868654031819,1.54667864109319,1.37016503954128,1.5107877947794,2.02506750069542,1.35096360967266,0.906284817968409,2.07104124700728,1.66059756134683,5.1873233542134,6.4878770186571,5.83456120963906,1.46729213839588,2.20612210140017,5.11167473943715,3.91466608753899,2.88827288632634,5.55933865880354,4.05566879824384,4.14977951049368,5.24392441831341,5.37811280200902,3.73330548211486,3.81034953026459,3.70829843023538,5.59436739344745,1.64834360321323,3.97437084362873,4.4573002810104,4.96932257246145,4.29185141905178,4.21504608233753,3.67026583619789,3.46919892355874,2.0122077016005,3.15683653725411,3.39510284614654,1.12228454331548,3.44041552560105,2.46261205938909,6.95692773388472,3.40861050609125,5.20847849649082,4.99621155875892,5.84829021113521,4.29742108096597,3.82576664137687,3.52946270591225,3.01428186306548
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2263404312402,12.9762471960979,8.07605709511399,1.56478268869608,0,0,0,0.279972843250725,0,0,0,0,10.2903774414379,15.4728057566929,8.76642556871652,0.606949382578793,1.05798195854407,0,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,1.15265491596466,0.933206510776299,0.270011876663381,0.420649922702764,1.71390590642282,1.98781686856452,0.734944795289724,0.287536413054709,0,3.30347642998166,3.19218345212969,2.30409799884365,0.263772575460388,0.457438218012048,0.52091337055676,1.11673199600552,3.37657566019008,1.83357897332172,2.65165726926301,3.55929201997757,1.67759501242771,0.757261933331841,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0,1.40444420131752,0.170430322578058,1.03914401841148,0.35333957451034,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0,0,1.37020655662872,2.33044095282455,2.67195850316685,3.46970653532272,4.26251669636998,3.22861696158482,4.06951129492081,7.2904998424137,2.26199864393416,6.17987419335935,2.16899035379867,0,3.23533699894818,2.42925670306433,2.90925151881133,1.86391761218122,0.878342391034642,1.46612694769419,1.02182822083437,0,0,0,2.09706895166752,2.28750301409313,1.7591609295801,1.91206752211504,4.34716277461562,2.0778804455956,1.94689515681309,14.5630290305952,4.22983700074316,1.76905930903572,2.10441855886474,1.30120442962704,2.75882525320168,3.60124259610698,2.71268672104287,1.63287597963187,1.40925092313335,1.49922759295566,1.03481348295606,6.46703978798527,14.9393803332577,18.8267702855425,11.836569551089,13.9023624612799,9.75106066262066,16.6683530490434,10.1507476077432,0,0,0,2.07125772535502,3.28336483973535,3.6012412292203,1.65721314909647,2.95146347621106,4.31947916084659,4.41814495025775,2.95100741539581,2.33530684734339,1.31647879930784,5.08919138645195,5.18840381093477,3.80119967305864,4.83010253640311,5.90508242545636,1.89260953707715,1.9551876352064,0,1.58670339998127,2.77274725695804,4.87697010906921,3.09281907173024,1.61346819698674,2.2237804384487,1.52180500890047,1.89811624617805,2.47048432086016,1.50801125280162,1.39269530428806,4.874102177978,0,0.864552199498777,1.7922714592893,3.41402221715547,5.1411830674378,6.76246414038483,5.49858585182348,3.87904974335251,3.29638353484497,8.28398636327771,4.72352473534727,6.75094529717912,4.56569506510662,0.296452627087149,0.83422552858047,0.982794975566015,0,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,1.45921704097532,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.482443521363367,9.60716588866344,2.4633883530163,2.28150967018836,2.20668611507745,3.98973422090454,5.19269398069629,4.52282917683426,2.73187107000918,4.25614889086716,1.99318220683897,4.62418829106713,12.2897486036803,10.7064688756855,18.370430439852,0,0,0.983528546038072,2.20749397043786,1.9266070798535,3.8679856575427,14.7541450839008,7.06918596172244,0.631016438832513,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,5.81954349353901,10.1497394090335,4.72372182125371,10.0631775013247,5.30980553359851,2.91336763385978,0.906970670894253,3.01768127609437,1.47650946440386,2.76691633149535,3.10113951801865,1.81766864738753,2.49548164869305,1.8962205476149,3.16255825724996,2.06271086496374,0.680879211507576,2.70091641046965,2.19909762430683,3.42939256050548,3.19212420556092,3.21063871683727,2.96188237083818,1.8267896946876,5.86679270159276,6.14313005505079,2.64634077665954,1.97863503529776,8.7190790415789,6.03129249281559,3.46179797609096,1.14898629821543,1.1659233465194,2.22510362412612,0.512612642393558,4.12773735926445,5.55583582109135,0,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,2.84702394223022,1.82987520414164,2.48412283890143,2.29997125615916,1.31017538247707,1.34864346384821,1.90102948168273,1.83229159388821,2.59229946583586,6.83473244395618,0.56369293868419,25.5673293735204,24.4878565876504,39.0846888571536,43.5268605119954,61.1621174276617,45.4172513559068,14.7130954873664,11.2199498535511,2.17425708743405,3.16833006883652,0,7.70355818102624,3.80030541509861,1.29920822977795,0.895133478337407,0,0.480781798079875,0.590758108698309,0.403865799792591,0.228620419965,0.504130925684203,0.292373642219257,0.384847366561318,0.116876902181569,2.26730383615211,0,0,0,5.40930863290133,8.25802891985201,8.79127796482872,3.00115730710692,0.501572104035363,2.82375921308533,1.38097570952153,1.71868654031819,1.54667864109319,1.37016503954128,1.5107877947794,2.02506750069542,1.35096360967266,0.906284817968409,2.07104124700728,1.66059756134683,5.1873233542134,6.4878770186571,5.83456120963906,1.46729213839588,2.20612210140017,5.11167473943715,3.91466608753899,2.88827288632634,5.55933865880354,4.05566879824384,4.14977951049368,5.24392441831341,5.37811280200902,3.73330548211486,3.81034953026459,3.70829843023538,5.59436739344745,1.64834360321323,3.97437084362873,4.4573002810104,4.96932257246145,4.29185141905178,4.21504608233753,3.67026583619789,3.46919892355874,2.0122077016005,3.15683653725411,3.39510284614654,1.12228454331548,3.44041552560105,2.46261205938909,6.95692773388472,3.40861050609125,5.20847849649082,4.99621155875892,5.84829021113521,4.29742108096597,3.82576664137687,3.52946270591225,3.01428186306548
|short_description=p3@Pdgfra
|short_description=p3@Pdgfra
}}
}}

Latest revision as of 05:26, 26 September 2015

Short description:p3@Pdgfra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pdgfra_5end
Coexpression cluster:MCL_coexpression_mm9:160
Association with transcript: 0bp_to_ENSMUST00000000476, NM_011058, uc008xua.1, uc008xub.1, uc008xuc.1_5end
EntrezGene:Pdgfra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pdgfra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C17.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H214.94
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A811.84
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B516.67
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D58.28
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B19.61
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H218.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H710.15
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G610.06
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G48.72
skin, neonate N03.CNhs11215.662-22H36.03
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F25.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F525.57
testis, embryo E15.CNhs11034.443-27C524.49
testis, embryo E16.CNhs11033.470-26G539.08
testis, embryo E17.CNhs11029.486-18I543.53
testis, embryo E18.CNhs11027.503-18G561.16
testis, neonate N00.CNhs11189.1300-22B745.42
testis, neonate N07.CNhs11222.726-26I414.71
testis, neonate N10.CNhs11204.763-44D911.22
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
reproductive structure2.34e-0926
reproductive system2.34e-0926
reproductive organ7.34e-0924
gonad3.28e-0718
gonad primordium3.28e-0718
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:75548299..75548322,%2B&oldid=4235627"