FFCP PHASE1:Mm9::chr12:107248414..107248435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22367 | |EntrezGene=22367 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |MCL_coexpression_id=36 | ||
|TSSclassifier=NA | |||
|UniProt=Q80X41,Q3UWH3 | |UniProt=Q80X41,Q3UWH3 | ||
|association_with_transcript=-37bp_to_ENSMUST00000021539,ENSMUST00000072040,ENSMUST00000085026,NM_001029843,NM_001029844,NM_011705,uc007ozb.1,uc007ozc.1,uc007ozd.1,uc007oze.1_5end | |association_with_transcript=-37bp_to_ENSMUST00000021539,ENSMUST00000072040,ENSMUST00000085026,NM_001029843,NM_001029844,NM_011705,uc007ozb.1,uc007ozc.1,uc007ozd.1,uc007oze.1_5end | ||
|cluster_id=chr12:107248414..107248435,+ | |||
|description=CAGE_peak_2_at_Vrk1_5end | |description=CAGE_peak_2_at_Vrk1_5end | ||
|id=chr12:107248414..107248435,+ | |id=chr12:107248414..107248435,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.09e-07!32;CL:0002032!1.09e-07!32;CL:0000037!1.09e-07!32;CL:0000566!1.09e-07!32;CL:0000837!1.09e-07!32 | |ontology_enrichment_celltype=CL:0000988!1.09e-07!32;CL:0002032!1.09e-07!32;CL:0000037!1.09e-07!32;CL:0000566!1.09e-07!32;CL:0000837!1.09e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.35e-09,32;CL:0002032,8.35e-09,32;CL:0000037,8.35e-09,32;CL:0000837,8.35e-09,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.41e-07!29;UBERON:0002193!2.49e-07!48;UBERON:0002390!6.27e-07!45;UBERON:0003061!6.27e-07!45 | |ontology_enrichment_uberon=UBERON:0004177!2.41e-07!29;UBERON:0002193!2.49e-07!48;UBERON:0002390!6.27e-07!45;UBERON:0003061!6.27e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.86e-09,48;UBERON:0002405,1.86e-09,48;UBERON:0002390,5.59e-09,45;UBERON:0003061,5.59e-09,45;UBERON:0004177,8.94e-09,29;UBERON:0005057,8.94e-09,29 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.33575854382378,0.934450562382103,5.29405626110463,0.985521055061667,0.70219357896598,1.02730780935303,1.83475965689274,3.25281386869291,4.72070173062586,3.99731714178795,4.45445588257617,0.699561878128147,6.15151222448563,5.48457734422955,4.66828616977833,1.87095238332354,4.96454756004426,3.6567970479451,1.11994695955385,1.14704640533585,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,1.44425809875637,0.498703936075477,1.02084678131185,9.62622750694888,13.2827008569046,14.1351410872926,10.5881667845583,6.14740936462601,13.1087795318411,0.251793635951155,0,0.367093504323363,0,0,0,0.194429899074283,0,1.43752564364972,5.36904339384756,4.35217285206807,2.35265659399725,0.257259436035947,0,0,0.404632921719196,1.5869729378161,0,0.338844532069132,0,0,0.988866362566974,0,0,0,2.48855069540346,2.8351247049655,2.52389953621658,0.285650984403804,0,2.32732518508413,2.01275489138296,0,0,0.127687338085188,0.921639199537461,0.527545150920775,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.931997229126503,0.757261933331841,0.755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,1.1930122580464,0.779358013808606,0.70667914902068,0.985903938436763,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0.5709193985953,2.84831672011889,0.29688427812965,1.21439728736295,0.608930956624282,1.15307748628029,1.3565037649736,1.52865319276416,1.75933227861546,0.494389935468748,0.578397427679647,1.76922110389975,1.13236794963186,1.76673214768315,0.484875253135222,0,0,0,0.255457055208591,4.91242010474273,4.19931911695385,3.30382590389968,0.898743836428936,0.457500602818626,1.25654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.712875546952214,1.24406970610093,0.252722758433675,2.10441855886474,1.95180664444056,1.37941262660084,1.62055916824814,1.65775299619287,1.63287597963187,2.562274405697,1.40552586839593,1.29351685369508,1.29340795759705,0.756424320671277,0.879755620819744,0.876782929710299,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,7.02213187313235,4.88961023517959,4.54661599032948,1.24275463521301,2.11073453982987,1.44049649168812,0.473489471170421,0.196764231747404,1.54267112887378,1.62773761325285,0.804820204198858,1.28441876603886,0.493679549740441,0.820837320395476,0.405344047729279,0.146199987425332,0.439100230582101,0.402619256281115,0,1.3377599609307,0,0.528901133327089,1.2797295032114,2.78684006232526,1.03093969057675,1.4117846723634,0.444756087689741,0.760902504450237,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.779856348476481,0,0.432276099749388,0,0.569003702859245,1.94222471436539,1.1270773567308,1.83286195060783,1.74557238450863,0.420814919341911,0.758838445491087,0.885660887877613,0.627994911365499,0.370191491765402,0.296452627087149,1.66845105716094,1.76903095601883,1.79889689907883,1.21716072833102,2.65294875727659,1.78238096246994,0.287696137450811,0.162135226775035,1.09824565275233,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,2.08440552947533,0.651859905768103,1.52770577197669,2.58159273117352,1.17254380209271,2.14239276797412,1.56106918286239,1.89162172927429,1.10732344824387,1.59454768657487,0.81931657357869,0.518054945597687,0.289298117163023,0,0.54390568381871,0.983528546038072,0.275936746304732,0.481651769963376,0.234423373184406,1.14754461763673,0.504941854408746,1.89304931649754,1.56175497718655,0.215423397732799,0.716906393857656,0.891194696329576,1.13230612315533,0.404810701674894,0.292255857911312,1.58115111178609,0,1.13552068166615,1.42452482933804,2.28041743095006,0.824850614862677,0,0.971122544619926,1.209294227859,0.565815239267694,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,0.776152102696527,1.71469628025274,0.177340233642274,0.535106452806212,2.13913726782757,1.2178597964584,0.469343416127421,0.42366414172764,0.441056796109924,0.8244312647074,0.968786560175433,1.02531972377865,1.55184047204077,0.984845398470368,0.582961673259701,0.18542530201051,2.56306321196779,3.714963623338,1.66675074632741,4.33247451110789,2.87057878214153,3.43167259809784,3.73952545986482,4.89830083132803,4.56059913554598,0.954670618015114,1.42351197111511,1.01659733563424,1.40406943068342,1.04544148007234,0.655087691238533,0.269728692769641,0.909188012978695,0.523511883968059,0.129614973291793,0,6.20062232552609,1.64468200648377,1.15820943319968,0.194451188344048,1.6790777052105,0.844780627453891,1.64300134104056,1.5624526181274,3.98465508817701,8.93861247056222,4.32045009386798,1.89606672376907,1.82452693761148,3.59488350076895,3.50786222040047,4.65469408735452,3.3775830312815,3.36547258655913,2.51072196196781,3.73575864808146,4.19137436602499,4.43635214602098,3.02119430293232,2.7901434075695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| |phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.33575854382378,0.934450562382103,5.29405626110463,0.985521055061667,0.70219357896598,1.02730780935303,1.83475965689274,3.25281386869291,4.72070173062586,3.99731714178795,4.45445588257617,0.699561878128147,6.15151222448563,5.48457734422955,4.66828616977833,1.87095238332354,4.96454756004426,3.6567970479451,1.11994695955385,1.14704640533585,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,1.44425809875637,0.498703936075477,1.02084678131185,9.62622750694888,13.2827008569046,14.1351410872926,10.5881667845583,6.14740936462601,13.1087795318411,0.251793635951155,0,0.367093504323363,0,0,0,0.194429899074283,0,1.43752564364972,5.36904339384756,4.35217285206807,2.35265659399725,0.257259436035947,0,0,0.404632921719196,1.5869729378161,0,0.338844532069132,0,0,0.988866362566974,0,0,0,2.48855069540346,2.8351247049655,2.52389953621658,0.285650984403804,0,2.32732518508413,2.01275489138296,0,0,0.127687338085188,0.921639199537461,0.527545150920775,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.931997229126503,0.757261933331841,0.755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,1.1930122580464,0.779358013808606,0.70667914902068,0.985903938436763,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0.5709193985953,2.84831672011889,0.29688427812965,1.21439728736295,0.608930956624282,1.15307748628029,1.3565037649736,1.52865319276416,1.75933227861546,0.494389935468748,0.578397427679647,1.76922110389975,1.13236794963186,1.76673214768315,0.484875253135222,0,0,0,0.255457055208591,4.91242010474273,4.19931911695385,3.30382590389968,0.898743836428936,0.457500602818626,1.25654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.712875546952214,1.24406970610093,0.252722758433675,2.10441855886474,1.95180664444056,1.37941262660084,1.62055916824814,1.65775299619287,1.63287597963187,2.562274405697,1.40552586839593,1.29351685369508,1.29340795759705,0.756424320671277,0.879755620819744,0.876782929710299,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,7.02213187313235,4.88961023517959,4.54661599032948,1.24275463521301,2.11073453982987,1.44049649168812,0.473489471170421,0.196764231747404,1.54267112887378,1.62773761325285,0.804820204198858,1.28441876603886,0.493679549740441,0.820837320395476,0.405344047729279,0.146199987425332,0.439100230582101,0.402619256281115,0,1.3377599609307,0,0.528901133327089,1.2797295032114,2.78684006232526,1.03093969057675,1.4117846723634,0.444756087689741,0.760902504450237,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.779856348476481,0,0.432276099749388,0,0.569003702859245,1.94222471436539,1.1270773567308,1.83286195060783,1.74557238450863,0.420814919341911,0.758838445491087,0.885660887877613,0.627994911365499,0.370191491765402,0.296452627087149,1.66845105716094,1.76903095601883,1.79889689907883,1.21716072833102,2.65294875727659,1.78238096246994,0.287696137450811,0.162135226775035,1.09824565275233,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,2.08440552947533,0.651859905768103,1.52770577197669,2.58159273117352,1.17254380209271,2.14239276797412,1.56106918286239,1.89162172927429,1.10732344824387,1.59454768657487,0.81931657357869,0.518054945597687,0.289298117163023,0,0.54390568381871,0.983528546038072,0.275936746304732,0.481651769963376,0.234423373184406,1.14754461763673,0.504941854408746,1.89304931649754,1.56175497718655,0.215423397732799,0.716906393857656,0.891194696329576,1.13230612315533,0.404810701674894,0.292255857911312,1.58115111178609,0,1.13552068166615,1.42452482933804,2.28041743095006,0.824850614862677,0,0.971122544619926,1.209294227859,0.565815239267694,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,0.776152102696527,1.71469628025274,0.177340233642274,0.535106452806212,2.13913726782757,1.2178597964584,0.469343416127421,0.42366414172764,0.441056796109924,0.8244312647074,0.968786560175433,1.02531972377865,1.55184047204077,0.984845398470368,0.582961673259701,0.18542530201051,2.56306321196779,3.714963623338,1.66675074632741,4.33247451110789,2.87057878214153,3.43167259809784,3.73952545986482,4.89830083132803,4.56059913554598,0.954670618015114,1.42351197111511,1.01659733563424,1.40406943068342,1.04544148007234,0.655087691238533,0.269728692769641,0.909188012978695,0.523511883968059,0.129614973291793,0,6.20062232552609,1.64468200648377,1.15820943319968,0.194451188344048,1.6790777052105,0.844780627453891,1.64300134104056,1.5624526181274,3.98465508817701,8.93861247056222,4.32045009386798,1.89606672376907,1.82452693761148,3.59488350076895,3.50786222040047,4.65469408735452,3.3775830312815,3.36547258655913,2.51072196196781,3.73575864808146,4.19137436602499,4.43635214602098,3.02119430293232,2.7901434075695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| ||
|short_description=p2@Vrk1 | |short_description=p2@Vrk1 | ||
}} | }} |
Latest revision as of 06:29, 26 September 2015
Short description: | p2@Vrk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vrk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -37bp_to_ENSMUST00000021539, ENSMUST00000072040, ENSMUST00000085026, NM_001029843, NM_001029844, NM_011705, uc007ozb.1, uc007ozc.1, uc007ozd.1, uc007oze.1_5end |
EntrezGene: | Vrk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.35e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.35e-09 | 32 |
hematopoietic stem cell | 8.35e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.35e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.86e-09 | 48 |
immune system | 1.86e-09 | 48 |
hematopoietic system | 5.59e-09 | 45 |
blood island | 5.59e-09 | 45 |
hemopoietic organ | 8.94e-09 | 29 |
immune organ | 8.94e-09 | 29 |