FFCP PHASE1:Mm9::chr17:34056415..34056422,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:34056415..34056422,+
|short_description=p7@Tapbp
|description=CAGE_peak_7_at_Tapbp_5end
|association_with_transcript=0bp_to_ENSMUST00000114350,NM_00102531...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21356 | |EntrezGene=21356 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2205 | |||
|TSSclassifier=NA | |||
|UniProt=E9QKX9,Q3TCU5,Q8C6N4,Q9D679,Q3U9A3,Q9R233 | |UniProt=E9QKX9,Q3TCU5,Q8C6N4,Q9D679,Q3U9A3,Q9R233 | ||
|association_with_transcript=0bp_to_ENSMUST00000114350,NM_001025313,NM_009318,uc008cae.1,uc008caf.1_5end | |||
|cluster_id=chr17:34056415..34056422,+ | |||
|description=CAGE_peak_7_at_Tapbp_5end | |||
|id=chr17:34056415..34056422,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.36e-10!50;CL:0002319!8.37e-08!43;CL:0000333!9.17e-08!10;CL:0000095!9.17e-08!10;CL:0000243!9.17e-08!10;CL:0000123!9.17e-08!10;CL:0000125!9.17e-08!10;CL:0000030!9.17e-08!10;CL:0000339!9.17e-08!10;CL:0000221!1.16e-07!44;CL:0000133!1.16e-07!44;CL:0002321!1.86e-07!70;CL:0000220!1.86e-07!70;CL:0002453!3.81e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.16e-23,8;CL:0000333,1.17e-18,10;CL:0000095,1.17e-18,10;CL:0000243,1.17e-18,10;CL:0000123,1.17e-18,10;CL:0000125,1.17e-18,10;CL:0000030,1.17e-18,10;CL:0000339,1.17e-18,10;CL:0000128,6.97e-18,6;CL:0000126,6.97e-18,6;CL:0000127,6.97e-18,6;CL:0002321,7.51e-14,70;CL:0002319,1.74e-10,43;CL:0000221,3.51e-10,44;CL:0000133,3.51e-10,44;CL:0000219,4.20e-09,54;CL:0002612,1.02e-08,3;CL:0002194,1.33e-07,4;CL:0000766,1.33e-07,4;CL:0000234,1.33e-07,4;CL:0000576,1.33e-07,4;CL:0000235,1.33e-07,4;CL:0000864,1.33e-07,4;CL:0002009,1.33e-07,4;CL:0000040,1.33e-07,4;CL:0000559,1.33e-07,4;CL:0000878,2.23e-07,2;CL:0000129,2.23e-07,2;CL:0002605,3.37e-07,2;CL:0002604,3.37e-07,2;CL:0002603,4.13e-07,2;CL:0002611,7.55e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,6.11e-14,5;UBERON:0002315,6.11e-14,5;UBERON:0002240,1.42e-11,6;UBERON:0005174,1.42e-11,6;UBERON:0001137,1.42e-11,6;UBERON:0003076,6.22e-11,12;UBERON:0003057,6.22e-11,12;UBERON:0002257,1.02e-08,3;UBERON:0002256,7.55e-07,2 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0.90739263392049,1.00179145989269,0,0,0.387369970324729,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.607425802169478,2.09868563438444,0,0.137114433605739,0,0.425216450755349,0.0992909512008853,0,0,0,0.57423196411502,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,1.25896817975577,0.506884656097573,0.550640256485045,5.47673941043627,1.52617609466313,3.07560655828261,3.4997381833371,1.39986421625363,2.87505128729943,0,0,0,0.514518872071894,1.71920063963254,1.03134418455488,0,0.528990979272033,0.633831403506179,0.677689064138264,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,3.59520132622086,4.99483796918021,0.103689612308478,0.135005938331691,0.420649922702764,2.57085885963423,1.54607978666129,0,0.383381884072945,0,1.10115880999389,0.383062014255563,0.307213066512487,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.763991238884051,1.17851434189467,1.42371680799103,1.3047961207771,0.454357159999104,0.68014404096107,0.289864488701678,0,1.3599426674155,0,0,0,0.280888840263504,1.02258193546835,1.29893002301434,0,0.14084341977668,3.84979432242953,5.09610479413291,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.452167921657868,0,0.879666139307728,0,0.578397427679647,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0,0.203678727700633,0.373220911830279,0.505445516867349,0,0.260240885925407,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.405344047729279,0.438599962275997,0.439100230582101,0,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0,0.156998727841375,0,0,0.333690211432188,0,0.449724224769707,0.608580364165509,0.241177159752417,0,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0.964887042726734,1.10851914099963,0.189491411770485,0.488894929326078,0,0,0,0.238043640886014,0,0.630540576424764,0.221464689648775,0.318909537314974,0.491589944147214,1.38147985492716,0.433947175744535,0,2.17562273527484,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.757412781613119,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0,0.567760340833074,0.712262414669021,0.325773918707152,0.659880491890142,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.643011105094777,0,0.356737635204141,0.164549020602121,0,3.28540391289194,0,0,0.49465875882444,0.161464426695906,0.301564624640779,0.119372344003136,0,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.904118764344118,0.337912250981556,0.234714477291508,0.39061315453185,0.524296722128554,0,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0,0.0762068066549998,0.201652370273681,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0,0.579568782096571,1.31377732815827,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.34461281373368,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0,0.644613162144895,0,0.661774257358546,0 | |phase1_expression=0.320297694209588,0,0.454999239389536,0.90739263392049,1.00179145989269,0,0,0.387369970324729,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.607425802169478,2.09868563438444,0,0.137114433605739,0,0.425216450755349,0.0992909512008853,0,0,0,0.57423196411502,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,1.25896817975577,0.506884656097573,0.550640256485045,5.47673941043627,1.52617609466313,3.07560655828261,3.4997381833371,1.39986421625363,2.87505128729943,0,0,0,0.514518872071894,1.71920063963254,1.03134418455488,0,0.528990979272033,0.633831403506179,0.677689064138264,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,3.59520132622086,4.99483796918021,0.103689612308478,0.135005938331691,0.420649922702764,2.57085885963423,1.54607978666129,0,0.383381884072945,0,1.10115880999389,0.383062014255563,0.307213066512487,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.763991238884051,1.17851434189467,1.42371680799103,1.3047961207771,0.454357159999104,0.68014404096107,0.289864488701678,0,1.3599426674155,0,0,0,0.280888840263504,1.02258193546835,1.29893002301434,0,0.14084341977668,3.84979432242953,5.09610479413291,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.452167921657868,0,0.879666139307728,0,0.578397427679647,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0,0.203678727700633,0.373220911830279,0.505445516867349,0,0.260240885925407,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.405344047729279,0.438599962275997,0.439100230582101,0,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0,0.156998727841375,0,0,0.333690211432188,0,0.449724224769707,0.608580364165509,0.241177159752417,0,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0.964887042726734,1.10851914099963,0.189491411770485,0.488894929326078,0,0,0,0.238043640886014,0,0.630540576424764,0.221464689648775,0.318909537314974,0.491589944147214,1.38147985492716,0.433947175744535,0,2.17562273527484,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.757412781613119,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0,0.567760340833074,0.712262414669021,0.325773918707152,0.659880491890142,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.643011105094777,0,0.356737635204141,0.164549020602121,0,3.28540391289194,0,0,0.49465875882444,0.161464426695906,0.301564624640779,0.119372344003136,0,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.904118764344118,0.337912250981556,0.234714477291508,0.39061315453185,0.524296722128554,0,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0,0.0762068066549998,0.201652370273681,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0,0.579568782096571,1.31377732815827,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.34461281373368,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0,0.644613162144895,0,0.661774257358546,0 | ||
|short_description=p7@Tapbp | |||
}} | }} |
Latest revision as of 07:04, 26 September 2015
Short description: | p7@Tapbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tapbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:2205 |
Association with transcript: | 0bp_to_ENSMUST00000114350, NM_001025313, NM_009318, uc008cae.1, uc008caf.1_5end |
EntrezGene: | Tapbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.16e-23 | 8 |
migratory neural crest cell | 1.17e-18 | 10 |
neuron associated cell | 1.17e-18 | 10 |
glial cell (sensu Vertebrata) | 1.17e-18 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-18 | 10 |
glial cell | 1.17e-18 | 10 |
glioblast | 1.17e-18 | 10 |
glioblast (sensu Vertebrata) | 1.17e-18 | 10 |
oligodendrocyte | 6.97e-18 | 6 |
macroglial cell | 6.97e-18 | 6 |
astrocyte | 6.97e-18 | 6 |
embryonic cell | 7.51e-14 | 70 |
neural cell | 1.74e-10 | 43 |
ectodermal cell | 3.51e-10 | 44 |
neurectodermal cell | 3.51e-10 | 44 |
motile cell | 4.20e-09 | 54 |
neuron of the ventral spinal cord | 1.02e-08 | 3 |
monopoietic cell | 1.33e-07 | 4 |
myeloid leukocyte | 1.33e-07 | 4 |
phagocyte | 1.33e-07 | 4 |
monocyte | 1.33e-07 | 4 |
macrophage | 1.33e-07 | 4 |
tissue-resident macrophage | 1.33e-07 | 4 |
macrophage dendritic cell progenitor | 1.33e-07 | 4 |
monoblast | 1.33e-07 | 4 |
promonocyte | 1.33e-07 | 4 |
central nervous system macrophage | 2.23e-07 | 2 |
microglial cell | 2.23e-07 | 2 |
astrocyte of the cerebral cortex | 3.37e-07 | 2 |
astrocyte of the hippocampus | 3.37e-07 | 2 |
astrocyte of the cerebellum | 4.13e-07 | 2 |
neuron of the dorsal spinal cord | 7.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 6.11e-14 | 5 |
gray matter of spinal cord | 6.11e-14 | 5 |
spinal cord | 1.42e-11 | 6 |
dorsal region element | 1.42e-11 | 6 |
dorsum | 1.42e-11 | 6 |
posterior neural tube | 6.22e-11 | 12 |
chordal neural plate | 6.22e-11 | 12 |
ventral horn of spinal cord | 1.02e-08 | 3 |
dorsal horn of spinal cord | 7.55e-07 | 2 |