FFCP PHASE1:Mm9::chr17:34056542..34056562,+: Difference between revisions
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{{FFCP|EntrezGene=21356|HGNC=|UniProt=|association_with_transcript=85bp_to_ENSMUST00000172888_5end|description=CAGE_peak_3_at_Tapbp_5end|id=chr17:34056542..34056562,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!1.80e-08!79;UBERON:0000926!3.95e-08!193;UBERON:0004120!3.95e-08!193;UBERON:0006603!3.95e-08!193;UBERON:0005156!4.42e-08!26;UBERON:0000990!4.42e-08!26;UBERON:0003133!8.57e-08!24;UBERON:0003886!1.33e-07!38;UBERON:0002553!1.77e-07!39;UBERON:0002323!3.88e-07!37;UBERON:0004458!3.88e-07!37;UBERON:0004176!7.09e-07!17;UBERON:0009196!7.09e-07!17;UBERON:0009117!7.09e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.75e-08,26;UBERON:0000990,3.75e-08,26;UBERON:0003886,6.92e-08,38;UBERON:0003133,7.72e-08,24;UBERON:0002553,9.29e-08,39;UBERON:0002323,2.15e-07,37;UBERON:0004458,2.15e-07,37;UBERON:0004176,2.95e-07,17;UBERON:0009196,2.95e-07,17;UBERON:0009117,2.95e-07,17|phase1_expression=4.48416771893423,3.83872948403297,1.36499771816861,2.11724947914781,2.00358291978539,0.671517087647559,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,1.99865857089398,2.83465374345756,3.49780939064073,1.10411757875383,0.411343300817216,0.42438965179803,3.656861476496,0.198581902401771,0.261199789138935,1.59992422793407,1.83527424853736,2.8711598205751,2.58457197695445,1.50829862880122,1.71021077510736,1.00812051903972,1.55211357458713,0,0,0,0,0.166234645358492,0,0.837063261473815,0,2.09409497589519,0.588231488031014,1.36609096991689,0.485510353031154,6.6725313527056,5.87986201073184,7.34187008646726,7.82391344348039,3.05235218932625,5.71184075109627,6.9994763666742,4.05960622713551,2.87505128729943,0.167782606057736,0.725362142011344,0,2.31533492432352,1.43266719969378,1.54701627683233,0.202316460859598,0,0,2.03306719241479,6.22506357277798,4.04954872776629,6.92206453796882,2.8419204597844,4.49400165777607,6.91592949578798,0.207379224616955,0.270011876663381,0,3.42781181284564,0.662605622854841,0.367472397644862,0.287536413054709,0,3.30347642998166,1.78762273319263,1.53606533256243,0.395658863190582,0.365950574409639,0,3.07101298901519,3.37657566019008,1.83357897332172,0.883885756421003,0.427115042397309,0.745597783301202,1.13589289999776,1.28471652181535,1.15945795480671,3.44169550792555,0.679971333707751,1.07940638327563,3.24888208723835,2.68816132258401,1.54488862144927,4.60161870960756,3.63700406444016,2.82671659608272,10.140726223921,6.41632387071589,0,0,5.62876706629157,3.29367825117628,5.56076889516262,2.74041311325744,0.258937883647172,2.52351636410202,0.693941307064543,0.608930956624282,0.922461989024234,1.80867168663147,3.52766121407114,3.51866455723091,3.95511948374998,2.74738778147832,4.42305275974937,1.45590164952668,0.220841518460394,0.969750506270444,0,2.34224637609238,2.51336048176146,1.02182822083437,0.718890747035522,0,0.254140454146129,1.64769703345305,0.915001205637253,0.125654352112864,0.869121600961382,1.02286182932132,1.0389402227978,1.29793010454206,2.34230536855727,3.85661608891288,5.05445516867349,5.26104639716185,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.680364991513279,1.15302348256365,0.749613796477831,2.06962696591213,0,0.567318240503458,0.879755620819744,1.09597866213787,1.66828349535359,0.348252166522167,0.411564272815887,0.796137067273973,0,1.02939162845886,0.284163499395593,1.86413195281952,1.40715635988658,1.2604344302271,1.89395788468168,1.96764231747404,1.54267112887378,0.697601834251224,0.804820204198858,1.63471479314037,1.97471819896177,1.14917224855367,1.62137619091711,1.46199987425332,3.07370161407471,2.01309628140558,0.630869845692382,0.720332286654991,2.31293148088659,1.05780226665418,0.213288250535234,0,0.77320476793256,0.403367049246685,0.444756087689741,0.951128130562796,0.474529061544512,1.97638745668813,1.50801125280162,1.1937388322469,0.58489226135736,1.79763881730844,0.216138049874694,0.398282546508734,0.569003702859245,1.37098215131675,2.25415471346161,1.4255592949172,1.93952487167626,1.33258057791605,2.65593455921881,2.50937251565324,3.767969468193,4.31890073726302,2.07516838961004,1.50160595144485,1.96558995113203,1.34917267430912,2.23146133527353,3.13530307678142,2.29163266603278,2.5892652370573,0.972811360650212,2.74561413188081,1.43768206527355,4.46569137202204,0.624075346229121,3.53610429125956,2.69096120282868,9.16642690590398,0.184753190166605,0.37898282354097,1.14075483509418,0.339490171550376,0.704070744865506,0.335012514883631,1.42826184531608,1.17080188714679,0.788175720530955,1.99318220683897,1.59454768657487,0.983179888294428,1.03610989119537,1.59113964439663,1.50791283939272,1.63171705145613,0.983528546038072,1.10374698521893,3.37156238974363,2.10981035865966,2.62295912602681,0,0.631016438832513,0,0,1.19484398976276,0.891194696329576,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0.642642632843614,3.83238230062325,3.7393776770123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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21356 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=85bp_to_ENSMUST00000172888_5end | |||
|cluster_id=chr17:34056542..34056562,+ | |||
|description=CAGE_peak_3_at_Tapbp_5end | |||
|id=chr17:34056542..34056562,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.80e-08!79;UBERON:0000926!3.95e-08!193;UBERON:0004120!3.95e-08!193;UBERON:0006603!3.95e-08!193;UBERON:0005156!4.42e-08!26;UBERON:0000990!4.42e-08!26;UBERON:0003133!8.57e-08!24;UBERON:0003886!1.33e-07!38;UBERON:0002553!1.77e-07!39;UBERON:0002323!3.88e-07!37;UBERON:0004458!3.88e-07!37;UBERON:0004176!7.09e-07!17;UBERON:0009196!7.09e-07!17;UBERON:0009117!7.09e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.75e-08,26;UBERON:0000990,3.75e-08,26;UBERON:0003886,6.92e-08,38;UBERON:0003133,7.72e-08,24;UBERON:0002553,9.29e-08,39;UBERON:0002323,2.15e-07,37;UBERON:0004458,2.15e-07,37;UBERON:0004176,2.95e-07,17;UBERON:0009196,2.95e-07,17;UBERON:0009117,2.95e-07,17 | |||
|phase1_expression=4.48416771893423,3.83872948403297,1.36499771816861,2.11724947914781,2.00358291978539,0.671517087647559,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,1.99865857089398,2.83465374345756,3.49780939064073,1.10411757875383,0.411343300817216,0.42438965179803,3.656861476496,0.198581902401771,0.261199789138935,1.59992422793407,1.83527424853736,2.8711598205751,2.58457197695445,1.50829862880122,1.71021077510736,1.00812051903972,1.55211357458713,0,0,0,0,0.166234645358492,0,0.837063261473815,0,2.09409497589519,0.588231488031014,1.36609096991689,0.485510353031154,6.6725313527056,5.87986201073184,7.34187008646726,7.82391344348039,3.05235218932625,5.71184075109627,6.9994763666742,4.05960622713551,2.87505128729943,0.167782606057736,0.725362142011344,0,2.31533492432352,1.43266719969378,1.54701627683233,0.202316460859598,0,0,2.03306719241479,6.22506357277798,4.04954872776629,6.92206453796882,2.8419204597844,4.49400165777607,6.91592949578798,0.207379224616955,0.270011876663381,0,3.42781181284564,0.662605622854841,0.367472397644862,0.287536413054709,0,3.30347642998166,1.78762273319263,1.53606533256243,0.395658863190582,0.365950574409639,0,3.07101298901519,3.37657566019008,1.83357897332172,0.883885756421003,0.427115042397309,0.745597783301202,1.13589289999776,1.28471652181535,1.15945795480671,3.44169550792555,0.679971333707751,1.07940638327563,3.24888208723835,2.68816132258401,1.54488862144927,4.60161870960756,3.63700406444016,2.82671659608272,10.140726223921,6.41632387071589,0,0,5.62876706629157,3.29367825117628,5.56076889516262,2.74041311325744,0.258937883647172,2.52351636410202,0.693941307064543,0.608930956624282,0.922461989024234,1.80867168663147,3.52766121407114,3.51866455723091,3.95511948374998,2.74738778147832,4.42305275974937,1.45590164952668,0.220841518460394,0.969750506270444,0,2.34224637609238,2.51336048176146,1.02182822083437,0.718890747035522,0,0.254140454146129,1.64769703345305,0.915001205637253,0.125654352112864,0.869121600961382,1.02286182932132,1.0389402227978,1.29793010454206,2.34230536855727,3.85661608891288,5.05445516867349,5.26104639716185,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.680364991513279,1.15302348256365,0.749613796477831,2.06962696591213,0,0.567318240503458,0.879755620819744,1.09597866213787,1.66828349535359,0.348252166522167,0.411564272815887,0.796137067273973,0,1.02939162845886,0.284163499395593,1.86413195281952,1.40715635988658,1.2604344302271,1.89395788468168,1.96764231747404,1.54267112887378,0.697601834251224,0.804820204198858,1.63471479314037,1.97471819896177,1.14917224855367,1.62137619091711,1.46199987425332,3.07370161407471,2.01309628140558,0.630869845692382,0.720332286654991,2.31293148088659,1.05780226665418,0.213288250535234,0,0.77320476793256,0.403367049246685,0.444756087689741,0.951128130562796,0.474529061544512,1.97638745668813,1.50801125280162,1.1937388322469,0.58489226135736,1.79763881730844,0.216138049874694,0.398282546508734,0.569003702859245,1.37098215131675,2.25415471346161,1.4255592949172,1.93952487167626,1.33258057791605,2.65593455921881,2.50937251565324,3.767969468193,4.31890073726302,2.07516838961004,1.50160595144485,1.96558995113203,1.34917267430912,2.23146133527353,3.13530307678142,2.29163266603278,2.5892652370573,0.972811360650212,2.74561413188081,1.43768206527355,4.46569137202204,0.624075346229121,3.53610429125956,2.69096120282868,9.16642690590398,0.184753190166605,0.37898282354097,1.14075483509418,0.339490171550376,0.704070744865506,0.335012514883631,1.42826184531608,1.17080188714679,0.788175720530955,1.99318220683897,1.59454768657487,0.983179888294428,1.03610989119537,1.59113964439663,1.50791283939272,1.63171705145613,0.983528546038072,1.10374698521893,3.37156238974363,2.10981035865966,2.62295912602681,0,0.631016438832513,0,0,1.19484398976276,0.891194696329576,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0.642642632843614,3.83238230062325,3.73937767701236,2.76907830901079,2.47455184458803,3.98235415019888,1.69946445308487,0.302323556964751,2.07465587731488,1.47650946440386,2.45948118355142,3.10113951801865,1.09060118843252,1.78248689192361,1.58018378967908,1.05418608574999,1.03135543248187,3.40439605753788,0.36012218806262,1.55230420539305,0.857348140126369,4.25616560741457,4.99432689285798,2.63278432963394,4.87143918583359,10.7948985709307,12.7099242518292,1.98475558249466,2.4732937941222,0.322928853391811,1.20625849856312,2.26807453605959,2.46211349617592,1.7488850197791,0.927126510052548,3.41741761595705,2.06386867963222,1.11116716421827,2.26042148405629,2.1871076435364,3.88922894451088,0,0.559805809294632,0.690999869022119,3.81868247206045,0.474503990371703,1.42323626988794,1.29606408986162,1.04544148007234,1.09181281873089,2.02296519577231,2.47960367176008,6.54389854960074,0.388844919875379,1.24267862617385,3.38215763210514,2.0932316446157,3.30916980914195,2.72231663681667,2.58319646955462,2.02747350588934,4.10750335260139,7.16124116641726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| |||
|short_description=p3@Tapbp | |||
}} |
Latest revision as of 07:05, 26 September 2015
Short description: | p3@Tapbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tapbp_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENSMUST00000172888_5end |
EntrezGene: | Tapbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 3.75e-08 | 26 |
reproductive system | 3.75e-08 | 26 |
body cavity precursor | 6.92e-08 | 38 |
reproductive organ | 7.72e-08 | 24 |
anatomical cavity | 9.29e-08 | 39 |
body cavity | 2.15e-07 | 37 |
body cavity or lining | 2.15e-07 | 37 |
external genitalia | 2.95e-07 | 17 |
indifferent external genitalia | 2.95e-07 | 17 |
indifferent gonad | 2.95e-07 | 17 |