Personal tools

FFCP PHASE1:Mm9::chr7:17428245..17428303,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=101540
|EntrezGene=101540
|HGNC=
|HGNC=
|MCL_coexpression_id=542
|MCL_coexpression_id=542
|TSSclassifier=NA
|UniProt=E9Q185,Q8BZ03
|UniProt=E9Q185,Q8BZ03
|association_with_transcript=0bp_to_ENSMUST00000168093,NM_001252458,uc009fig.1_5end
|association_with_transcript=0bp_to_ENSMUST00000168093,NM_001252458,uc009fig.1_5end
|cluster_id=chr7:17428245..17428303,+
|description=CAGE_peak_1_at_Prkd2_5end
|description=CAGE_peak_1_at_Prkd2_5end
|id=chr7:17428245..17428303,+
|id=chr7:17428245..17428303,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.60e-08!130;UBERON:0000925!2.60e-08!130;UBERON:0006595!2.60e-08!130;UBERON:0001007!3.86e-08!128;UBERON:0001555!3.86e-08!128;UBERON:0007026!3.86e-08!128;UBERON:0004921!1.33e-07!126;UBERON:0004185!1.33e-07!126
|ontology_enrichment_uberon=UBERON:0004119!2.60e-08!130;UBERON:0000925!2.60e-08!130;UBERON:0006595!2.60e-08!130;UBERON:0001007!3.86e-08!128;UBERON:0001555!3.86e-08!128;UBERON:0007026!3.86e-08!128;UBERON:0004921!1.33e-07!126;UBERON:0004185!1.33e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.38e-09,118;UBERON:0000925,5.38e-09,118;UBERON:0006595,5.38e-09,118;UBERON:0001007,7.95e-09,116;UBERON:0001555,7.95e-09,116;UBERON:0007026,7.95e-09,116;UBERON:0004921,2.90e-08,114;UBERON:0005409,2.28e-07,47
|phase1_expression=8.64803774365887,19.1936474201649,21.3849642513082,13.0059610861937,16.0286633582831,10.2406355866253,10.7461814673942,29.1818710977962,8.024957162645,11.4691617897777,5.13653904676515,4.14815226775749,35.2673503658284,32.345548895029,11.3257319017325,11.5410902412201,9.09430441566591,28.8647881302787,34.141493967829,19.0975343309114,10.970584429488,6.056748023254,3.39559725880616,17.9191513528615,14.6821939882989,10.9104073181854,9.47676391549965,12.0663890304098,16.9120843316173,13.1055667475164,11.5299865540758,8.25539875497521,7.99584223859941,31.6963362030877,7.51014211353314,4.3221007793208,5.10423390655923,42.2716947044277,24.2213956802378,37.6937095661135,43.5291301142951,56.0097297665925,34.4712350652119,13.8486499773135,12.8748702648783,9.72797786456912,32.8604364626176,9.15705656797875,12.9614847813338,13.6100929351998,15.2585199571645,17.2503077237966,21.4761735753903,20.3101399763176,16.1325023588383,6.17422646486273,8.88253663810146,5.67239301505187,1.82084814773638,2.11596391708813,3.1691570175309,13.5537812827653,17.7858959222228,11.2487464660175,14.8329954385046,8.5257613793532,16.4780060785123,16.1371688235053,3.94020526772215,3.78016627328734,2.3135745748652,2.57085885963423,2.20868540951614,2.81728838194394,3.64212789869298,3.67687514644008,4.40463523997555,2.42605942361857,3.99376986466233,2.50583946687368,2.65314166446988,0.52091337055676,1.67509799400829,2.8138130501584,2.75036845998258,1.17851434189467,1.56608848879013,2.98239113320481,2.34751199332871,5.66786700800891,23.1891590961342,6.88339101585109,1.3599426674155,9.17495425784289,8.4470934268197,6.72040330646003,9.40977614882737,8.01022516116871,6.23486411046885,4.94675404314476,9.43650912503759,8.98285341900225,7.64415719119937,0,3.68034769719064,2.78695852022608,3.53867111510348,9.02052649780574,45.8320054055494,16.3286352971307,5.03107447621794,7.91610243611567,7.14908041493781,9.94769427647309,9.52468527799209,7.91699525376955,4.94389935468748,18.3641183288288,19.4614321428972,8.08834249737046,9.93786833071771,9.69750506270444,24.2309289583559,7.90508151931177,7.12118803165747,27.0784478521107,5.87094110079009,0.599902730993408,5.46401976414178,6.29120685500255,5.49000723382352,2.01046963380583,3.12883776346098,2.30143911597297,3.74018480207208,3.73154905055843,11.1004906596845,13.9335807083304,16.1742565397552,15.7831391914855,7.67710613479952,7.35686734187113,8.64298223065676,7.53524089178575,9.79725587779121,8.71173297936978,8.99536555773397,12.4177617954728,9.26942369611222,9.26619792822314,9.50136070485324,9.20622076195814,10.2877482213471,16.0195996600197,18.5203922767149,4.37875387000685,4.91549231119264,4.88961023517959,3.9782889915383,4.97101854085205,8.20841209933837,6.12211008967451,7.81257627431194,9.05115466038058,8.02188987014367,6.0458825635106,6.17028823219124,6.65562451492866,7.73431294593358,7.38753588355929,10.9442892886905,8.33339928324394,11.4166059951346,9.79706856950714,3.78521907415429,4.42489833230923,33.7027158643474,21.4204958997471,5.75878276445132,7.89604684325491,8.37638498593607,12.5043785266472,12.008414367623,14.2669219584419,13.7613427847908,9.0584425098206,14.0747716928151,14.1259095149217,15.9870551437679,20.6728463990471,21.18152888772,16.7278669533668,8.15571974098251,8.22589290790047,7.88954149711563,6.72049381889537,9.69762435838129,9.88915060453492,11.2561036081178,11.0707610984702,9.10592621479974,7.89741849099523,7.11486305009157,5.5058884886311,7.86235980452812,6.74586337154561,7.91154473415161,6.99413763282009,8.91190481234969,9.78166867332756,6.16113861745134,4.3929826110093,14.3768206527355,7.07067800570156,11.8574315783533,12.1237861414614,9.68746033018326,7.71909634181387,33.0708210398222,4.16881105895066,9.61493361007953,7.97801903143384,13.6120344007331,18.0906758037161,20.4717531161972,18.3425628986331,17.339865851681,24.3611158613652,23.4398509926506,22.6131374307718,22.9671025881641,22.4206040801343,7.53956419696361,6.52686820582452,11.3105782794378,13.2449638226272,3.85321415970701,4.68846746368813,6.55739781506702,7.82659874333556,4.41711507182759,6.63745865304285,9.04778270477756,6.93009514062401,8.68914828921337,7.64306633129848,6.07216052512342,9.9366991689846,5.13874111330481,3.53453448063988,14.9037089468682,11.2181330310371,10.2618784392753,26.2302495526331,2.65490276679926,10.1967867185092,6.34879469625977,9.9960692270626,8.85905678642318,9.83792473420568,8.26970538138308,10.5424781548477,5.34746067577082,10.1131762539461,9.48767477174989,12.3762651897824,29.2778060948258,10.0834212657534,8.66703181344455,13.5032332069903,18.0887038315119,15.3397183137781,12.3411765451591,16.4411072521884,9.38686832254841,12.4980921809654,14.1138174755176,28.525321758876,18.2454802166373,15.4401087816079,13.8471919043638,14.4443991775654,15.1570035047522,4.26478194624172,21.0171183381359,9.90656966223468,12.222838806401,14.1276342753518,14.3528939107076,15.7856939512501,8.49892149969276,9.93655311497972,6.63359874261234,22.9120948323627,9.64824780422463,9.96265388921559,9.18045396985311,9.61806161666556,12.8833912610245,9.03591120778299,11.571483801547,13.0877970992015,16.5907165813495,18.0188400795208,2.25477175473676,5.38259565758324,3.80554528051325,8.75030347548214,5.8121920564979,9.12363077650202,8.80179289843155,8.72369378454466,4.40409246587986,2.89900944991207,2.59227005632079,18.0126338758062,9.52808511863772,11.4009162452958,9.09445760844565,15.2172691317359,11.9208812868759,8.65407236543776,11.8151621739662,10.7024436945036,10.440332511735,11.0908803650525,15.8856345605796,10.4870907387959,13.7914744574251,17.9117003056017,8.87943813496259,4.12683740403588,6.2117308054709,22.0236137196697,17.6421526924111,20.5129819179337,22.2943114242228,20.5644562654499,1.6942555278512,1.84130094602871,1.14579102687879,1.54667864109319,0,0.755393897389701,5.40018000185445,4.05289082901798,0.453142408984205,0.51776031175182,4.4628559461196,7.58147259461959,7.0000778359195,8.99494853152688,5.8691685535835,5.69914876195044,9.11211583986622,12.9802086060503,11.2321723357135,11.1186773176071,9.37873409593887,7.54505365544305,9.27050923951836,8.83547103187196,10.4532553499216,9.52587382566147,5.91010062318763,7.90927803901191,8.24171801606613,7.65434384698866,11.3146853287187,7.63145966485151,7.39152188836695,11.046327664057,8.94039113945641,10.3229821627845,8.23175877927476,7.62902163169744,7.87663860305998,10.1005608898393,8.42308628681636,6.99381824866501,8.18462086339379,8.05671574167023,7.9091710502268,8.74337022782811,10.292990771598,12.4625211348013,13.9640482410256,13.0148937280514,9.97031693167812
|phase1_expression=8.64803774365887,19.1936474201649,21.3849642513082,13.0059610861937,16.0286633582831,10.2406355866253,10.7461814673942,29.1818710977962,8.024957162645,11.4691617897777,5.13653904676515,4.14815226775749,35.2673503658284,32.345548895029,11.3257319017325,11.5410902412201,9.09430441566591,28.8647881302787,34.141493967829,19.0975343309114,10.970584429488,6.056748023254,3.39559725880616,17.9191513528615,14.6821939882989,10.9104073181854,9.47676391549965,12.0663890304098,16.9120843316173,13.1055667475164,11.5299865540758,8.25539875497521,7.99584223859941,31.6963362030877,7.51014211353314,4.3221007793208,5.10423390655923,42.2716947044277,24.2213956802378,37.6937095661135,43.5291301142951,56.0097297665925,34.4712350652119,13.8486499773135,12.8748702648783,9.72797786456912,32.8604364626176,9.15705656797875,12.9614847813338,13.6100929351998,15.2585199571645,17.2503077237966,21.4761735753903,20.3101399763176,16.1325023588383,6.17422646486273,8.88253663810146,5.67239301505187,1.82084814773638,2.11596391708813,3.1691570175309,13.5537812827653,17.7858959222228,11.2487464660175,14.8329954385046,8.5257613793532,16.4780060785123,16.1371688235053,3.94020526772215,3.78016627328734,2.3135745748652,2.57085885963423,2.20868540951614,2.81728838194394,3.64212789869298,3.67687514644008,4.40463523997555,2.42605942361857,3.99376986466233,2.50583946687368,2.65314166446988,0.52091337055676,1.67509799400829,2.8138130501584,2.75036845998258,1.17851434189467,1.56608848879013,2.98239113320481,2.34751199332871,5.66786700800891,23.1891590961342,6.88339101585109,1.3599426674155,9.17495425784289,8.4470934268197,6.72040330646003,9.40977614882737,8.01022516116871,6.23486411046885,4.94675404314476,9.43650912503759,8.98285341900225,7.64415719119937,0,3.68034769719064,2.78695852022608,3.53867111510348,9.02052649780574,45.8320054055494,16.3286352971307,5.03107447621794,7.91610243611567,7.14908041493781,9.94769427647309,9.52468527799209,7.91699525376955,4.94389935468748,18.3641183288288,19.4614321428972,8.08834249737046,9.93786833071771,9.69750506270444,24.2309289583559,7.90508151931177,7.12118803165747,27.0784478521107,5.87094110079009,0.599902730993408,5.46401976414178,6.29120685500255,5.49000723382352,2.01046963380583,3.12883776346098,2.30143911597297,3.74018480207208,3.73154905055843,11.1004906596845,13.9335807083304,16.1742565397552,15.7831391914855,7.67710613479952,7.35686734187113,8.64298223065676,7.53524089178575,9.79725587779121,8.71173297936978,8.99536555773397,12.4177617954728,9.26942369611222,9.26619792822314,9.50136070485324,9.20622076195814,10.2877482213471,16.0195996600197,18.5203922767149,4.37875387000685,4.91549231119264,4.88961023517959,3.9782889915383,4.97101854085205,8.20841209933837,6.12211008967451,7.81257627431194,9.05115466038058,8.02188987014367,6.0458825635106,6.17028823219124,6.65562451492866,7.73431294593358,7.38753588355929,10.9442892886905,8.33339928324394,11.4166059951346,9.79706856950714,3.78521907415429,4.42489833230923,33.7027158643474,21.4204958997471,5.75878276445132,7.89604684325491,8.37638498593607,12.5043785266472,12.008414367623,14.2669219584419,13.7613427847908,9.0584425098206,14.0747716928151,14.1259095149217,15.9870551437679,20.6728463990471,21.18152888772,16.7278669533668,8.15571974098251,8.22589290790047,7.88954149711563,6.72049381889537,9.69762435838129,9.88915060453492,11.2561036081178,11.0707610984702,9.10592621479974,7.89741849099523,7.11486305009157,5.5058884886311,7.86235980452812,6.74586337154561,7.91154473415161,6.99413763282009,8.91190481234969,9.78166867332756,6.16113861745134,4.3929826110093,14.3768206527355,7.07067800570156,11.8574315783533,12.1237861414614,9.68746033018326,7.71909634181387,33.0708210398222,4.16881105895066,9.61493361007953,7.97801903143384,13.6120344007331,18.0906758037161,20.4717531161972,18.3425628986331,17.339865851681,24.3611158613652,23.4398509926506,22.6131374307718,22.9671025881641,22.4206040801343,7.53956419696361,6.52686820582452,11.3105782794378,13.2449638226272,3.85321415970701,4.68846746368813,6.55739781506702,7.82659874333556,4.41711507182759,6.63745865304285,9.04778270477756,6.93009514062401,8.68914828921337,7.64306633129848,6.07216052512342,9.9366991689846,5.13874111330481,3.53453448063988,14.9037089468682,11.2181330310371,10.2618784392753,26.2302495526331,2.65490276679926,10.1967867185092,6.34879469625977,9.9960692270626,8.85905678642318,9.83792473420568,8.26970538138308,10.5424781548477,5.34746067577082,10.1131762539461,9.48767477174989,12.3762651897824,29.2778060948258,10.0834212657534,8.66703181344455,13.5032332069903,18.0887038315119,15.3397183137781,12.3411765451591,16.4411072521884,9.38686832254841,12.4980921809654,14.1138174755176,28.525321758876,18.2454802166373,15.4401087816079,13.8471919043638,14.4443991775654,15.1570035047522,4.26478194624172,21.0171183381359,9.90656966223468,12.222838806401,14.1276342753518,14.3528939107076,15.7856939512501,8.49892149969276,9.93655311497972,6.63359874261234,22.9120948323627,9.64824780422463,9.96265388921559,9.18045396985311,9.61806161666556,12.8833912610245,9.03591120778299,11.571483801547,13.0877970992015,16.5907165813495,18.0188400795208,2.25477175473676,5.38259565758324,3.80554528051325,8.75030347548214,5.8121920564979,9.12363077650202,8.80179289843155,8.72369378454466,4.40409246587986,2.89900944991207,2.59227005632079,18.0126338758062,9.52808511863772,11.4009162452958,9.09445760844565,15.2172691317359,11.9208812868759,8.65407236543776,11.8151621739662,10.7024436945036,10.440332511735,11.0908803650525,15.8856345605796,10.4870907387959,13.7914744574251,17.9117003056017,8.87943813496259,4.12683740403588,6.2117308054709,22.0236137196697,17.6421526924111,20.5129819179337,22.2943114242228,20.5644562654499,1.6942555278512,1.84130094602871,1.14579102687879,1.54667864109319,0,0.755393897389701,5.40018000185445,4.05289082901798,0.453142408984205,0.51776031175182,4.4628559461196,7.58147259461959,7.0000778359195,8.99494853152688,5.8691685535835,5.69914876195044,9.11211583986622,12.9802086060503,11.2321723357135,11.1186773176071,9.37873409593887,7.54505365544305,9.27050923951836,8.83547103187196,10.4532553499216,9.52587382566147,5.91010062318763,7.90927803901191,8.24171801606613,7.65434384698866,11.3146853287187,7.63145966485151,7.39152188836695,11.046327664057,8.94039113945641,10.3229821627845,8.23175877927476,7.62902163169744,7.87663860305998,10.1005608898393,8.42308628681636,6.99381824866501,8.18462086339379,8.05671574167023,7.9091710502268,8.74337022782811,10.292990771598,12.4625211348013,13.9640482410256,13.0148937280514,9.97031693167812
|short_description=p1@Prkd2
|short_description=p1@Prkd2
}}
}}

Latest revision as of 07:14, 26 September 2015

Short description:p1@Prkd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prkd2_5end
Coexpression cluster:MCL_coexpression_mm9:542
Association with transcript: 0bp_to_ENSMUST00000168093, NM_001252458, uc009fig.1_5end
EntrezGene:Prkd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prkd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E832.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.68
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I212.07
Ileum epithelium, pool1.CNhs13199.10252-104B916.91
Ileum epithelium, pool2.CNhs13232.10253-104C113.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G842.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H124.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H337.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G943.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H256.01
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.13
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E816.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F95.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.02
accessory axillary lymph node, adult.CNhs10475.1063-29H945.83
adrenal gland, adult.CNhs10508.49-24D716.33
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C19.52
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H118.36
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H727.08
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.46
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.93
epididymis, adult.CNhs10490.58-23B216.17
eyeball, adult.CNhs10484.31-12G415.78
eyeball, embryo E12.CNhs11016.345-16C67.68
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G89.00
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E710.29
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B518.52
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F58.21
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C89.05
heart, embryo E16.CNhs11021.457-17C68.02
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E36.66
heart, neonate N03.CNhs11221.1349-25I27.73
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I68.33
heart, neonate N25.CNhs11196.1351-25D311.42
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I333.70
intestine, adult.CNhs10496.178-9A321.42
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D88.38
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D312.01
intestine, embryo E18.CNhs10526.1289-20F714.27
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E99.06
intestine, neonate N06.CNhs11102.688-20B814.07
intestine, neonate N07.CNhs11095.720-20F214.13
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E321.18
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F88.23
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G79.89
kidney, neonate N10.CNhs11206.758-6D511.26
kidney, neonate N20.CNhs11113.832-19I111.07
kidney, neonate N25.CNhs11122.1353-25F39.11
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A38.91
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B133.07
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F89.61
lung, embryo E15.CNhs11020.432-17C57.98
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A618.09
lung, embryo E18.CNhs10583.1287-20I620.47
lung, neonate N00.CNhs11224.640-42C618.34
lung, neonate N06.CNhs11212.683-20E517.34
lung, neonate N07.CNhs11111.715-19A324.36
lung, neonate N10.CNhs11219.750-23E623.44
lung, neonate N20.CNhs11109.822-18A422.61
lung, neonate N25.CNhs11119.1359-25C722.97
lung, neonate N30.CNhs11133.1394-42H222.42
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I410.26
oviduct, adult pregnant day01.CNhs10500.988-6G626.23
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E510.00
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B918.09
pituitary gland, embryo E16.CNhs11036.449-43F615.34
pituitary gland, embryo E17.CNhs11039.1265-44F512.34
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F814.11
skin, adult.CNhs10492.30-1C328.53
skin, neonate N00.CNhs11124.650-25G418.25
skin, neonate N03.CNhs11215.662-22H315.44
skin, neonate N06.CNhs11097.693-20I513.85
skin, neonate N10.CNhs11108.762-6C414.44
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G221.02
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D114.13
spleen, neonate N20.CNhs11112.824-19H114.35
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.63
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D49.18
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C612.88
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A911.57
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I116.59
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B78.80
testis, neonate N07.CNhs11222.726-26I48.72
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B518.01
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I211.40
thymus, embryo E16.CNhs11002.456-26C59.09
thymus, embryo E17.CNhs10581.478-18C115.22
thymus, embryo E18.CNhs10595.1273-19G411.92
thymus, neonate N02.CNhs11181.1541-43F88.65
thymus, neonate N03.CNhs11137.2104-43C711.82
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D310.44
thymus, neonate N10.CNhs11194.748-24E411.09
thymus, neonate N20.CNhs11186.820-7A215.89
thymus, neonate N25.CNhs11125.1362-25G710.49
thymus, neonate N30.CNhs11132.1393-42G213.79
tongue, adult.CNhs10499.32-1B417.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.21
urinary bladder, adult.CNhs10481.879-12E422.02
uterus, adult pregnant day19.CNhs10497.590-15F517.64
uterus, adult.CNhs10509.92-27E520.51
vagina, adult.CNhs10502.89-27D522.29
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I84.46
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.06
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C212.46
whole body, neonate N01.CNhs10576.659-23C613.96
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure5.38e-09118
endoderm5.38e-09118
presumptive endoderm5.38e-09118
digestive system7.95e-09116
digestive tract7.95e-09116
primitive gut7.95e-09116
subdivision of digestive tract2.90e-08114
gastrointestinal system2.28e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:17428245..17428303,%2B&oldid=4240261"