FFCP PHASE1:Mm9::chr4:122878659..122878674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230718 | |EntrezGene=230718 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=A3KFX0 | |UniProt=A3KFX0 | ||
|association_with_transcript=-72bp_to_ENSMUST00000068262_5end | |association_with_transcript=-72bp_to_ENSMUST00000068262_5end | ||
|cluster_id=chr4:122878659..122878674,+ | |||
|description=CAGE_peak_3_at_Nt5c1a_5end | |description=CAGE_peak_3_at_Nt5c1a_5end | ||
|id=chr4:122878659..122878674,+ | |id=chr4:122878659..122878674,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.91e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.69e-08!18;UBERON:0000948!2.69e-08!18;UBERON:0005498!2.69e-08!18;UBERON:0004140!2.69e-08!18;UBERON:0009881!2.69e-08!18;UBERON:0004141!2.69e-08!18;UBERON:0003084!2.69e-08!18;UBERON:0007005!2.69e-08!18;UBERON:0004139!2.69e-08!18;UBERON:0004291!2.69e-08!18;UBERON:0003103!4.44e-07!43 | |ontology_enrichment_uberon=UBERON:0007100!2.69e-08!18;UBERON:0000948!2.69e-08!18;UBERON:0005498!2.69e-08!18;UBERON:0004140!2.69e-08!18;UBERON:0009881!2.69e-08!18;UBERON:0004141!2.69e-08!18;UBERON:0003084!2.69e-08!18;UBERON:0007005!2.69e-08!18;UBERON:0004139!2.69e-08!18;UBERON:0004291!2.69e-08!18;UBERON:0003103!4.44e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.91e-11,3;UBERON:0002275,4.91e-11,3;UBERON:0010314,1.68e-09,92;UBERON:0000073,2.57e-07,54;UBERON:0007100,4.65e-07,18;UBERON:0000948,4.65e-07,18;UBERON:0005498,4.65e-07,18;UBERON:0004140,4.65e-07,18;UBERON:0009881,4.65e-07,18;UBERON:0004141,4.65e-07,18;UBERON:0003084,4.65e-07,18;UBERON:0007005,4.65e-07,18;UBERON:0004139,4.65e-07,18;UBERON:0004291,4.65e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.441737081903227,0,0,0,3.30347642998166,1.0214987046815,1.22885226604995,0,0,0,1.11673199600552,0,0.916789486660861,0.883885756421003,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.63286352971307,0,0,0.461230994512117,0.301445281105245,0.23517741427141,0.879666139307728,0,0,0,0.323533699894818,0,0.969750506270444,0,3.80615036115011,2.30391377494801,0,0.11981512450592,0,0,1.49790639404823,0.457500602818626,0.125654352112864,0.695297280769106,1.53429274398198,2.28566849015516,0.973447578406546,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,1.60964040839772,0.583826711835847,0.822799249567402,1.47750717671186,2.91847714365081,4.09359964790931,3.29325172936576,2.68412837520744,1.26173969138476,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.234423373184406,0,3.7870639080656,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0.576060012515731,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,2.26730383615211,1.33191572024439,0.62799699626633,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,1.35004500046361,0.900642406448441,0,2.07104124700728,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.407412341537585,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0.661774257358546,1.15933917810211 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.441737081903227,0,0,0,3.30347642998166,1.0214987046815,1.22885226604995,0,0,0,1.11673199600552,0,0.916789486660861,0.883885756421003,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.63286352971307,0,0,0.461230994512117,0.301445281105245,0.23517741427141,0.879666139307728,0,0,0,0.323533699894818,0,0.969750506270444,0,3.80615036115011,2.30391377494801,0,0.11981512450592,0,0,1.49790639404823,0.457500602818626,0.125654352112864,0.695297280769106,1.53429274398198,2.28566849015516,0.973447578406546,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,1.60964040839772,0.583826711835847,0.822799249567402,1.47750717671186,2.91847714365081,4.09359964790931,3.29325172936576,2.68412837520744,1.26173969138476,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.234423373184406,0,3.7870639080656,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0.576060012515731,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,2.26730383615211,1.33191572024439,0.62799699626633,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,1.35004500046361,0.900642406448441,0,2.07104124700728,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.407412341537585,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0.661774257358546,1.15933917810211 | ||
|short_description=p3@Nt5c1a | |short_description=p3@Nt5c1a | ||
}} | }} |
Latest revision as of 07:23, 26 September 2015
Short description: | p3@Nt5c1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nt5c1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | -72bp_to_ENSMUST00000068262_5end |
EntrezGene: | Nt5c1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.91e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.91e-11 | 3 |
reticular formation | 4.91e-11 | 3 |
structure with developmental contribution from neural crest | 1.68e-09 | 92 |
regional part of nervous system | 2.57e-07 | 54 |
primary circulatory organ | 4.65e-07 | 18 |
heart | 4.65e-07 | 18 |
primitive heart tube | 4.65e-07 | 18 |
primary heart field | 4.65e-07 | 18 |
anterior lateral plate mesoderm | 4.65e-07 | 18 |
heart tube | 4.65e-07 | 18 |
heart primordium | 4.65e-07 | 18 |
cardiac mesoderm | 4.65e-07 | 18 |
cardiogenic plate | 4.65e-07 | 18 |
heart rudiment | 4.65e-07 | 18 |