FFCP PHASE1:Mm9::chr5:89105160..89105211,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:89105160..89105211,-
|short_description=p1@Grsf1
|description=CAGE_peak_1_at_Grsf1_5end
|association_with_transcript=0bp_to_ENSMUST00000078945,NM_178700,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=231413 | |EntrezGene=231413 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2081 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C5Q4 | |UniProt=Q8C5Q4 | ||
|association_with_transcript=0bp_to_ENSMUST00000078945,NM_178700,uc008yac.1_5end | |||
|cluster_id=chr5:89105160..89105211,- | |||
|description=CAGE_peak_1_at_Grsf1_5end | |||
|id=chr5:89105160..89105211,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.03e-12!47;UBERON:0005177!5.61e-11!85;UBERON:0000466!1.03e-09!79;UBERON:0001048!1.04e-09!147;UBERON:0009569!1.46e-09!66;UBERON:0000468!2.17e-09!333;UBERON:0005172!3.58e-09!49;UBERON:0005173!3.58e-09!49;UBERON:0002417!3.58e-09!49;UBERON:0000916!3.58e-09!49;UBERON:0002100!6.52e-09!98;UBERON:0003103!1.50e-08!43;UBERON:0000926!2.26e-08!193;UBERON:0004120!2.26e-08!193;UBERON:0006603!2.26e-08!193;UBERON:0002365!1.53e-07!25;UBERON:0002330!1.53e-07!25;UBERON:0007100!2.77e-07!18;UBERON:0000948!2.77e-07!18;UBERON:0005498!2.77e-07!18;UBERON:0004140!2.77e-07!18;UBERON:0009881!2.77e-07!18;UBERON:0004141!2.77e-07!18;UBERON:0003084!2.77e-07!18;UBERON:0007005!2.77e-07!18;UBERON:0004139!2.77e-07!18;UBERON:0004291!2.77e-07!18;UBERON:0002107!5.99e-07!22;UBERON:0007499!5.99e-07!22;UBERON:0006925!5.99e-07!22;UBERON:0009497!5.99e-07!22;UBERON:0000015!5.99e-07!22;UBERON:0002423!5.99e-07!22;UBERON:0006235!5.99e-07!22;UBERON:0008835!5.99e-07!22;UBERON:0003894!5.99e-07!22;UBERON:0004161!5.99e-07!22;UBERON:0008836!5.99e-07!22;UBERON:0003104!9.97e-07!131;UBERON:0009142!9.97e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.39e-13,79;UBERON:0003914,3.03e-12,47;UBERON:0002100,2.17e-10,90;UBERON:0009569,1.46e-09,66;UBERON:0005172,3.58e-09,49;UBERON:0005173,3.58e-09,49;UBERON:0002417,3.58e-09,49;UBERON:0000916,3.58e-09,49;UBERON:0003103,1.50e-08,43;UBERON:0003104,2.52e-08,61;UBERON:0009142,2.52e-08,61;UBERON:0002365,1.53e-07,25;UBERON:0002330,1.53e-07,25;UBERON:0007100,2.77e-07,18;UBERON:0000948,2.77e-07,18;UBERON:0005498,2.77e-07,18;UBERON:0004140,2.77e-07,18;UBERON:0009881,2.77e-07,18;UBERON:0004141,2.77e-07,18;UBERON:0003084,2.77e-07,18;UBERON:0007005,2.77e-07,18;UBERON:0004139,2.77e-07,18;UBERON:0004291,2.77e-07,18;UBERON:0001048,5.44e-07,134;UBERON:0002107,5.99e-07,22;UBERON:0007499,5.99e-07,22;UBERON:0006925,5.99e-07,22;UBERON:0009497,5.99e-07,22;UBERON:0000015,5.99e-07,22;UBERON:0002423,5.99e-07,22;UBERON:0006235,5.99e-07,22;UBERON:0008835,5.99e-07,22;UBERON:0003894,5.99e-07,22;UBERON:0004161,5.99e-07,22;UBERON:0008836,5.99e-07,22 | |||
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| ||
|short_description=p1@Grsf1 | |||
}} | }} |
Latest revision as of 07:33, 26 September 2015
Short description: | p1@Grsf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grsf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2081 |
Association with transcript: | 0bp_to_ENSMUST00000078945, NM_178700, uc008yac.1_5end |
EntrezGene: | Grsf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.39e-13 | 79 |
epithelial tube | 3.03e-12 | 47 |
trunk | 2.17e-10 | 90 |
subdivision of trunk | 1.46e-09 | 66 |
abdomen element | 3.58e-09 | 49 |
abdominal segment element | 3.58e-09 | 49 |
abdominal segment of trunk | 3.58e-09 | 49 |
abdomen | 3.58e-09 | 49 |
compound organ | 1.50e-08 | 43 |
mesenchyme | 2.52e-08 | 61 |
entire embryonic mesenchyme | 2.52e-08 | 61 |
exocrine gland | 1.53e-07 | 25 |
exocrine system | 1.53e-07 | 25 |
primary circulatory organ | 2.77e-07 | 18 |
heart | 2.77e-07 | 18 |
primitive heart tube | 2.77e-07 | 18 |
primary heart field | 2.77e-07 | 18 |
anterior lateral plate mesoderm | 2.77e-07 | 18 |
heart tube | 2.77e-07 | 18 |
heart primordium | 2.77e-07 | 18 |
cardiac mesoderm | 2.77e-07 | 18 |
cardiogenic plate | 2.77e-07 | 18 |
heart rudiment | 2.77e-07 | 18 |
primordium | 5.44e-07 | 134 |
liver | 5.99e-07 | 22 |
epithelial sac | 5.99e-07 | 22 |
digestive gland | 5.99e-07 | 22 |
epithelium of foregut-midgut junction | 5.99e-07 | 22 |
anatomical boundary | 5.99e-07 | 22 |
hepatobiliary system | 5.99e-07 | 22 |
foregut-midgut junction | 5.99e-07 | 22 |
hepatic diverticulum | 5.99e-07 | 22 |
liver primordium | 5.99e-07 | 22 |
septum transversum | 5.99e-07 | 22 |
liver bud | 5.99e-07 | 22 |