FFCP PHASE1:Mm9::chr12:112659702..112659715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74190 | |EntrezGene=74190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011yuw.1_5end | |association_with_transcript=0bp_to_uc011yuw.1_5end | ||
|cluster_id=chr12:112659702..112659715,+ | |||
|description=CAGE_peak_4_at_1200009I06Rik_5end | |description=CAGE_peak_4_at_1200009I06Rik_5end | ||
|id=chr12:112659702..112659715,+ | |id=chr12:112659702..112659715,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.91e-10,3;CL:0000765,4.91e-10,3;CL:0000038,4.91e-10,3;CL:0000547,4.91e-10,3;CL:0000682,1.81e-09,3;CL:0000239,3.95e-09,6;CL:0000677,3.95e-09,6;CL:0000584,3.95e-09,6;CL:0000075,8.05e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.91e-10,3;DOID:0060083,4.91e-10,3;DOID:1240,4.91e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000160!8.16e-12!43;UBERON:0004923!1.15e-10!24;UBERON:0000344!1.52e-10!15;UBERON:0005409!2.35e-10!59;UBERON:0001242!1.32e-08!13;UBERON:0000060!1.32e-08!13;UBERON:0001262!1.32e-08!13;UBERON:0004786!1.32e-08!13 | |ontology_enrichment_uberon=UBERON:0000160!8.16e-12!43;UBERON:0004923!1.15e-10!24;UBERON:0000344!1.52e-10!15;UBERON:0005409!2.35e-10!59;UBERON:0001242!1.32e-08!13;UBERON:0000060!1.32e-08!13;UBERON:0001262!1.32e-08!13;UBERON:0004786!1.32e-08!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.39e-36,31;UBERON:0005409,2.60e-22,47;UBERON:0000344,1.28e-15,15;UBERON:0001242,1.80e-11,13;UBERON:0001262,1.80e-11,13;UBERON:0004786,1.80e-11,13;UBERON:0004923,3.66e-09,24;UBERON:0001007,2.40e-08,116;UBERON:0001555,2.40e-08,116;UBERON:0007026,2.40e-08,116;UBERON:0004119,3.98e-08,118;UBERON:0000925,3.98e-08,118;UBERON:0006595,3.98e-08,118;UBERON:0002108,1.56e-07,4;UBERON:0004921,1.00e-06,114 | |||
|phase1_expression=0,9.42233600626275,12.739978702907,28.7341000741489,32.5582224465126,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.60586496747019,8.03924749761028,3.01533397311352,2.58565479223067,2.85035129184561,8.06496415231778,0.886922042621219,5.08024538767705,7.99584223859941,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0,0,0,0,0,37.0069036941854,8.72686869989696,0,0,0,0,1.11189021922435,1.71203063501303,9.49058123089023,8.07024878147653,1.50801125280162,1.1937388322469,3.70431765526328,7.19055526923377,5.18731319699266,5.17767310461355,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0.0603129249281559,0,0,9.91034844541493,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,9.42233600626275,12.739978702907,28.7341000741489,32.5582224465126,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.60586496747019,8.03924749761028,3.01533397311352,2.58565479223067,2.85035129184561,8.06496415231778,0.886922042621219,5.08024538767705,7.99584223859941,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0,0,0,0,0,37.0069036941854,8.72686869989696,0,0,0,0,1.11189021922435,1.71203063501303,9.49058123089023,8.07024878147653,1.50801125280162,1.1937388322469,3.70431765526328,7.19055526923377,5.18731319699266,5.17767310461355,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0.0603129249281559,0,0,9.91034844541493,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p4@1200009I06Rik | |short_description=p4@1200009I06Rik | ||
}} | }} |
Latest revision as of 08:26, 26 September 2015
Short description: | p4@1200009I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_1200009I06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_uc011yuw.1_5end |
EntrezGene: | 1200009I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.91e-10 | 3 |
erythroblast | 4.91e-10 | 3 |
erythroid progenitor cell | 4.91e-10 | 3 |
proerythroblast | 4.91e-10 | 3 |
M cell of gut | 1.81e-09 | 3 |
brush border epithelial cell | 3.95e-09 | 6 |
gut absorptive cell | 3.95e-09 | 6 |
enterocyte | 3.95e-09 | 6 |
columnar/cuboidal epithelial cell | 8.05e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.39e-36 | 31 |
gastrointestinal system | 2.60e-22 | 47 |
mucosa | 1.28e-15 | 15 |
intestinal mucosa | 1.80e-11 | 13 |
wall of intestine | 1.80e-11 | 13 |
gastrointestinal system mucosa | 1.80e-11 | 13 |
organ component layer | 3.66e-09 | 24 |
digestive system | 2.40e-08 | 116 |
digestive tract | 2.40e-08 | 116 |
primitive gut | 2.40e-08 | 116 |
endoderm-derived structure | 3.98e-08 | 118 |
endoderm | 3.98e-08 | 118 |
presumptive endoderm | 3.98e-08 | 118 |
small intestine | 1.56e-07 | 4 |
subdivision of digestive tract | 1.00e-06 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.91e-10 | 3 |
immune system cancer | 4.91e-10 | 3 |
leukemia | 4.91e-10 | 3 |