FFCP PHASE1:Mm9::chr17:34999406..34999417,-: Difference between revisions
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{{FFCP|EntrezGene=14962|HGNC=|MCL_coexpression_id=516|UniProt=B8JJM5,B8JJM6,Q3UEG8|association_with_transcript=41bp_to_ENSMUST00000025229,NM_001142706,NM_008198,uc008cdy.2,uc012aqq.1_5end|description=CAGE_peak_4_at_Cfb_5end|id=chr17:34999406..34999417,-|ontology_enrichment_celltype=CL:0000239!2.70e-07!6;CL:0000677!2.70e-07!6;CL:0000212!2.70e-07!6;CL:0000584!2.70e-07!6;CL:0002563!3.18e-07!9;CL:0002251!3.18e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.31e-12,6;CL:0000677,1.31e-12,6;CL:0000584,1.31e-12,6;CL:0000075,9.08e-11,7;CL:0002563,2.61e-08,9;CL:0002251,2.61e-08,9;CL:0000066,9.67e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.62e-13!43;UBERON:0000344!6.93e-13!15;UBERON:0002107!1.33e-12!22;UBERON:0007499!1.33e-12!22;UBERON:0006925!1.33e-12!22;UBERON:0009497!1.33e-12!22;UBERON:0000015!1.33e-12!22;UBERON:0002423!1.33e-12!22;UBERON:0006235!1.33e-12!22;UBERON:0008835!1.33e-12!22;UBERON:0003894!1.33e-12!22;UBERON:0004161!1.33e-12!22;UBERON:0008836!1.33e-12!22;UBERON:0009854!8.54e-12!23;UBERON:0009856!8.54e-12!23;UBERON:0001242!7.92e-11!13;UBERON:0000060!7.92e-11!13;UBERON:0001262!7.92e-11!13;UBERON:0004786!7.92e-11!13;UBERON:0004119!1.12e-10!130;UBERON:0000925!1.12e-10!130;UBERON:0006595!1.12e-10!130;UBERON:0002365!2.21e-10!25;UBERON:0002330!2.21e-10!25;UBERON:0005409!4.71e-10!59;UBERON:0004923!5.27e-10!24;UBERON:0001007!8.82e-10!128;UBERON:0001555!8.82e-10!128;UBERON:0007026!8.82e-10!128;UBERON:0005172!6.28e-09!49;UBERON:0005173!6.28e-09!49;UBERON:0002417!6.28e-09!49;UBERON:0000916!6.28e-09!49;UBERON:0004921!1.17e-08!126;UBERON:0004185!1.17e-08!126;UBERON:0003929!1.95e-07!55;UBERON:0003350!3.18e-07!9;UBERON:0004808!3.18e-07!9;UBERON:0001277!3.18e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.92e-16,31;UBERON:0000344,4.83e-15,15;UBERON:0004923,5.09e-11,24;UBERON:0001242,1.13e-10,13;UBERON:0001262,1.13e-10,13;UBERON:0004786,1.13e-10,13;UBERON:0001007,2.79e-10,116;UBERON:0001555,2.79e-10,116;UBERON:0007026,2.79e-10,116;UBERON:0004119,5.04e-10,118;UBERON:0000925,5.04e-10,118;UBERON:0006595,5.04e-10,118;UBERON:0005409,1.31e-09,47;UBERON:0004921,2.35e-08,114;UBERON:0003350,2.61e-08,9;UBERON:0004808,2.61e-08,9;UBERON:0001277,2.61e-08,9;UBERON:0002107,9.45e-08,22;UBERON:0007499,9.45e-08,22;UBERON:0006925,9.45e-08,22;UBERON:0009497,9.45e-08,22;UBERON:0000015,9.45e-08,22;UBERON:0002423,9.45e-08,22;UBERON:0006235,9.45e-08,22;UBERON:0008835,9.45e-08,22;UBERON:0003894,9.45e-08,22;UBERON:0004161,9.45e-08,22;UBERON:0008836,9.45e-08,22;UBERON:0009854,2.32e-07,23;UBERON:0009856,2.32e-07,23;UBERON:0001962,4.79e-07,2;UBERON:0001961,4.79e-07,2;UBERON:0001744,4.79e-07,2;UBERON:0003929,8.06e-07,55;UBERON:0000485,9.66e-07,11|phase1_expression=0,4.53668029931169,2.72999543633722,1.51232105653415,1.50268718983904,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,2.06468352960453,2.8711598205751,1.7230479846363,0.646413698057667,3.6104449696711,1.26015064879965,0.886922042621219,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59910566979068,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0,0.461230994512117,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,1.14135375667535,0,1.97638745668813,2.01068167040216,0.994782360205754,0.779856348476481,1.79763881730844,1.08069024937347,1.39398891278057,0,0,0,0.203651327845314,0.193952487167626,0.420814919341911,2.21327879934901,2.21415221969403,0.627994911365499,1.48076596706161,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,1.01430060694251,0.72353147925725,1.2731292589071,0.863088412352432,0.324270453550071,1.92192989231657,4.31304619582064,2.60498663367952,3.74445207737473,1.26289438973556,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0,0|short_description=p4@Cfb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14962 | |||
|HGNC= | |||
|MCL_coexpression_id=516 | |||
|TSSclassifier=NA | |||
|UniProt=B8JJM5,B8JJM6,Q3UEG8 | |||
|association_with_transcript=41bp_to_ENSMUST00000025229,NM_001142706,NM_008198,uc008cdy.2,uc012aqq.1_5end | |||
|cluster_id=chr17:34999406..34999417,- | |||
|description=CAGE_peak_4_at_Cfb_5end | |||
|id=chr17:34999406..34999417,- | |||
|ontology_enrichment_celltype=CL:0000239!2.70e-07!6;CL:0000677!2.70e-07!6;CL:0000212!2.70e-07!6;CL:0000584!2.70e-07!6;CL:0002563!3.18e-07!9;CL:0002251!3.18e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.31e-12,6;CL:0000677,1.31e-12,6;CL:0000584,1.31e-12,6;CL:0000075,9.08e-11,7;CL:0002563,2.61e-08,9;CL:0002251,2.61e-08,9;CL:0000066,9.67e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.62e-13!43;UBERON:0000344!6.93e-13!15;UBERON:0002107!1.33e-12!22;UBERON:0007499!1.33e-12!22;UBERON:0006925!1.33e-12!22;UBERON:0009497!1.33e-12!22;UBERON:0000015!1.33e-12!22;UBERON:0002423!1.33e-12!22;UBERON:0006235!1.33e-12!22;UBERON:0008835!1.33e-12!22;UBERON:0003894!1.33e-12!22;UBERON:0004161!1.33e-12!22;UBERON:0008836!1.33e-12!22;UBERON:0009854!8.54e-12!23;UBERON:0009856!8.54e-12!23;UBERON:0001242!7.92e-11!13;UBERON:0000060!7.92e-11!13;UBERON:0001262!7.92e-11!13;UBERON:0004786!7.92e-11!13;UBERON:0004119!1.12e-10!130;UBERON:0000925!1.12e-10!130;UBERON:0006595!1.12e-10!130;UBERON:0002365!2.21e-10!25;UBERON:0002330!2.21e-10!25;UBERON:0005409!4.71e-10!59;UBERON:0004923!5.27e-10!24;UBERON:0001007!8.82e-10!128;UBERON:0001555!8.82e-10!128;UBERON:0007026!8.82e-10!128;UBERON:0005172!6.28e-09!49;UBERON:0005173!6.28e-09!49;UBERON:0002417!6.28e-09!49;UBERON:0000916!6.28e-09!49;UBERON:0004921!1.17e-08!126;UBERON:0004185!1.17e-08!126;UBERON:0003929!1.95e-07!55;UBERON:0003350!3.18e-07!9;UBERON:0004808!3.18e-07!9;UBERON:0001277!3.18e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.92e-16,31;UBERON:0000344,4.83e-15,15;UBERON:0004923,5.09e-11,24;UBERON:0001242,1.13e-10,13;UBERON:0001262,1.13e-10,13;UBERON:0004786,1.13e-10,13;UBERON:0001007,2.79e-10,116;UBERON:0001555,2.79e-10,116;UBERON:0007026,2.79e-10,116;UBERON:0004119,5.04e-10,118;UBERON:0000925,5.04e-10,118;UBERON:0006595,5.04e-10,118;UBERON:0005409,1.31e-09,47;UBERON:0004921,2.35e-08,114;UBERON:0003350,2.61e-08,9;UBERON:0004808,2.61e-08,9;UBERON:0001277,2.61e-08,9;UBERON:0002107,9.45e-08,22;UBERON:0007499,9.45e-08,22;UBERON:0006925,9.45e-08,22;UBERON:0009497,9.45e-08,22;UBERON:0000015,9.45e-08,22;UBERON:0002423,9.45e-08,22;UBERON:0006235,9.45e-08,22;UBERON:0008835,9.45e-08,22;UBERON:0003894,9.45e-08,22;UBERON:0004161,9.45e-08,22;UBERON:0008836,9.45e-08,22;UBERON:0009854,2.32e-07,23;UBERON:0009856,2.32e-07,23;UBERON:0001962,4.79e-07,2;UBERON:0001961,4.79e-07,2;UBERON:0001744,4.79e-07,2;UBERON:0003929,8.06e-07,55;UBERON:0000485,9.66e-07,11 | |||
|phase1_expression=0,4.53668029931169,2.72999543633722,1.51232105653415,1.50268718983904,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,2.06468352960453,2.8711598205751,1.7230479846363,0.646413698057667,3.6104449696711,1.26015064879965,0.886922042621219,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59910566979068,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0,0.461230994512117,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,1.14135375667535,0,1.97638745668813,2.01068167040216,0.994782360205754,0.779856348476481,1.79763881730844,1.08069024937347,1.39398891278057,0,0,0,0.203651327845314,0.193952487167626,0.420814919341911,2.21327879934901,2.21415221969403,0.627994911365499,1.48076596706161,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,1.01430060694251,0.72353147925725,1.2731292589071,0.863088412352432,0.324270453550071,1.92192989231657,4.31304619582064,2.60498663367952,3.74445207737473,1.26289438973556,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Cfb | |||
}} |
Latest revision as of 08:54, 26 September 2015
Short description: | p4@Cfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cfb_5end |
Coexpression cluster: | MCL_coexpression_mm9:516 |
Association with transcript: | 41bp_to_ENSMUST00000025229, NM_001142706, NM_008198, uc008cdy.2, uc012aqq.1_5end |
EntrezGene: | Cfb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.31e-12 | 6 |
gut absorptive cell | 1.31e-12 | 6 |
enterocyte | 1.31e-12 | 6 |
columnar/cuboidal epithelial cell | 9.08e-11 | 7 |
intestinal epithelial cell | 2.61e-08 | 9 |
epithelial cell of alimentary canal | 2.61e-08 | 9 |
epithelial cell | 9.67e-07 | 25 |