FFCP PHASE1:Mm9::chr17:35051404..35051421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70129 | |EntrezGene=70129 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VA1,E9PWB0,Q3TL93,Q3ULA4 | |UniProt=Q91VA1,E9PWB0,Q3TL93,Q3ULA4 | ||
|association_with_transcript=0bp_to_ENSMUST00000007249,ENSMUST00000171047,ENSMUST00000173664,NM_023557,uc008ceh.2_5end | |association_with_transcript=0bp_to_ENSMUST00000007249,ENSMUST00000171047,ENSMUST00000173664,NM_023557,uc008ceh.2_5end | ||
|cluster_id=chr17:35051404..35051421,+ | |||
|description=CAGE_peak_1_at_Slc44a4_5end | |description=CAGE_peak_1_at_Slc44a4_5end | ||
|id=chr17:35051404..35051421,+ | |id=chr17:35051404..35051421,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.76e-07,9;CL:0002251,1.76e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.48e-21!43;UBERON:0005409!3.25e-20!59;UBERON:0004119!2.90e-15!130;UBERON:0000925!2.90e-15!130;UBERON:0006595!2.90e-15!130;UBERON:0001007!2.14e-14!128;UBERON:0001555!2.14e-14!128;UBERON:0007026!2.14e-14!128;UBERON:0004921!2.38e-13!126;UBERON:0004185!2.38e-13!126;UBERON:0000344!7.47e-11!15;UBERON:0001242!1.35e-09!13;UBERON:0000060!1.35e-09!13;UBERON:0001262!1.35e-09!13;UBERON:0004786!1.35e-09!13;UBERON:0004923!3.10e-07!24;UBERON:0001008!6.37e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.43e-22,31;UBERON:0005409,4.76e-20,47;UBERON:0000344,1.64e-12,15;UBERON:0004119,1.84e-11,118;UBERON:0000925,1.84e-11,118;UBERON:0006595,1.84e-11,118;UBERON:0001242,4.95e-11,13;UBERON:0001262,4.95e-11,13;UBERON:0004786,4.95e-11,13;UBERON:0001007,1.24e-10,116;UBERON:0001555,1.24e-10,116;UBERON:0007026,1.24e-10,116;UBERON:0004921,1.20e-09,114;UBERON:0001008,6.94e-09,19;UBERON:0004923,1.17e-08,24;UBERON:0006554,2.10e-08,18;UBERON:0003350,1.76e-07,9;UBERON:0004808,1.76e-07,9;UBERON:0001277,1.76e-07,9 | |||
|phase1_expression=0.960893082628764,148.663523654368,127.39978702907,127.639897171482,131.234681245943,38.9479910835584,47.1897534002962,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7740476415736,0,0,86.7158931540264,127.322150992279,147.57761477756,135.259266793949,115.708051952322,539.476487836645,296.387432597679,288.249663851896,0,0,0,20.2196133825892,21.4442692512455,21.2336130512864,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,9.27566363845369,0,0,0,0,0,15.1679973742292,0,0,0,5.63373679106722,0,0,0,36.1540038488728,32.1767029153375,34.3756622610053,29.0027054486412,0,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.251333182659351,67.4842261914841,0,0,0,0,0,193.847431666847,0.292780797011547,0.209446706813455,131.049469322007,0,0,0,0,0,0,0,0,0,0,1.42575109390443,6.46916247172484,64.444303400587,9.89076722666428,0,0,0,0.150704817835715,0.136072998302656,0,0.281105173679186,2.58703370739016,0,0.567318240503458,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0,182.391168207056,70.3438507325028,0.639864751605702,1.85789337488351,14.9486255133628,55.4629692714192,94.288290590225,132.967712652679,91.5841088780907,145.099779111854,119.635559388928,143.44761634167,126.726656627428,97.0724961346559,114.985442533337,99.769777900438,1.32767530667157,2.85621281524322,5.63538678365402,6.51684249105006,9.89157684554891,9.04752076585109,23.5239918102237,39.4119095105538,38.9356845046609,46.5207307985188,0.592905254174298,0.333690211432188,0.786235980452812,1.12431056192427,2.02860121388503,0.482354319504834,3.31013607315846,5.17853047411459,0.486405680325106,6.04035109013779,0,1.86070473834252,1.87222603868736,0.757736633841335,0.717589654087649,0.964887042726734,12.7479701214957,0,0.162964976442026,0,0,1.00503754465089,2.14239276797412,3.31727201358258,1.7339865851681,2.87904096543407,1.75400245523236,4.26044618260919,5.52591941970866,6.94315481191256,0,0,2.45882136509518,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38730383437209,0.534196811001766,1.14020871547503,19.1365342648141,7.96470830039777,1.21390318077491,3.32555912661226,1.50884063804718,2.95301892880773,3.07435147943927,20.4158351602895,4.72593848320757,2.85197902707777,4.10847785316561,5.27093042874994,6.18813259489121,1.70219802876894,0,0.129358683782755,0.214337035031592,0.354680467284547,0,0.329098041204242,2.13125464380219,18.0697215209057,19.9122146611991,69.0253885912031,0.16488625294148,0,0.0603129249281559,0,0.984845398470368,93.5653485581821,0,0,0,0.185194527369712,0,0,0,0,0,0,65.8722726430428,0.474503990371703,2.23651413839534,9.93649135560572,8.99079672862215,15.7221045897248,15.9139928734088,18.3490671710246,45.5455339052212,288.522930547531,31.6883049674332,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0.352071715937262,0.911430693907651,0.104859344425711,0.241584120826006,0.864090018773596,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.504832249740738,0.228620419965,0,0.194915761479505,0.0962118416403295,0.116876902181569,7.9355634265324,2.21985953374065,14.5336447707351,11.7519231454855,4.25017106870819,13.8885031833875,70.1470720943625,16.9351019472462,92.7908392465422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0.209613162627982,0.919217542250071,6.22290837844523,6.79915688888351,4.49286893428541,6.57012750585873,5.0695859978048,5.84741658296836,6.74218853783153,5.6342134116285,6.4902079919843,3.81034953026459,5.67833197129792,5.59436739344745,7.41754621445952,5.88795680537589,4.80016953339582,4.43689515398344,4.76872379894642,3.34296758254356,5.74067220533517,5.24610568928394,5.12198324043763,8.15516105457313,5.29636043998861,1.68342681497322,5.57584585183618,5.51625101303155,4.91077251803627,6.04253680625267,4.82266527452853,0.499621155875892,7.95367468714389,7.30561583764214,0.382576664137687,0.661774257358546,0.231867835620421 | |phase1_expression=0.960893082628764,148.663523654368,127.39978702907,127.639897171482,131.234681245943,38.9479910835584,47.1897534002962,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7740476415736,0,0,86.7158931540264,127.322150992279,147.57761477756,135.259266793949,115.708051952322,539.476487836645,296.387432597679,288.249663851896,0,0,0,20.2196133825892,21.4442692512455,21.2336130512864,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,9.27566363845369,0,0,0,0,0,15.1679973742292,0,0,0,5.63373679106722,0,0,0,36.1540038488728,32.1767029153375,34.3756622610053,29.0027054486412,0,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.251333182659351,67.4842261914841,0,0,0,0,0,193.847431666847,0.292780797011547,0.209446706813455,131.049469322007,0,0,0,0,0,0,0,0,0,0,1.42575109390443,6.46916247172484,64.444303400587,9.89076722666428,0,0,0,0.150704817835715,0.136072998302656,0,0.281105173679186,2.58703370739016,0,0.567318240503458,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0,182.391168207056,70.3438507325028,0.639864751605702,1.85789337488351,14.9486255133628,55.4629692714192,94.288290590225,132.967712652679,91.5841088780907,145.099779111854,119.635559388928,143.44761634167,126.726656627428,97.0724961346559,114.985442533337,99.769777900438,1.32767530667157,2.85621281524322,5.63538678365402,6.51684249105006,9.89157684554891,9.04752076585109,23.5239918102237,39.4119095105538,38.9356845046609,46.5207307985188,0.592905254174298,0.333690211432188,0.786235980452812,1.12431056192427,2.02860121388503,0.482354319504834,3.31013607315846,5.17853047411459,0.486405680325106,6.04035109013779,0,1.86070473834252,1.87222603868736,0.757736633841335,0.717589654087649,0.964887042726734,12.7479701214957,0,0.162964976442026,0,0,1.00503754465089,2.14239276797412,3.31727201358258,1.7339865851681,2.87904096543407,1.75400245523236,4.26044618260919,5.52591941970866,6.94315481191256,0,0,2.45882136509518,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38730383437209,0.534196811001766,1.14020871547503,19.1365342648141,7.96470830039777,1.21390318077491,3.32555912661226,1.50884063804718,2.95301892880773,3.07435147943927,20.4158351602895,4.72593848320757,2.85197902707777,4.10847785316561,5.27093042874994,6.18813259489121,1.70219802876894,0,0.129358683782755,0.214337035031592,0.354680467284547,0,0.329098041204242,2.13125464380219,18.0697215209057,19.9122146611991,69.0253885912031,0.16488625294148,0,0.0603129249281559,0,0.984845398470368,93.5653485581821,0,0,0,0.185194527369712,0,0,0,0,0,0,65.8722726430428,0.474503990371703,2.23651413839534,9.93649135560572,8.99079672862215,15.7221045897248,15.9139928734088,18.3490671710246,45.5455339052212,288.522930547531,31.6883049674332,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0.352071715937262,0.911430693907651,0.104859344425711,0.241584120826006,0.864090018773596,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.504832249740738,0.228620419965,0,0.194915761479505,0.0962118416403295,0.116876902181569,7.9355634265324,2.21985953374065,14.5336447707351,11.7519231454855,4.25017106870819,13.8885031833875,70.1470720943625,16.9351019472462,92.7908392465422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0.209613162627982,0.919217542250071,6.22290837844523,6.79915688888351,4.49286893428541,6.57012750585873,5.0695859978048,5.84741658296836,6.74218853783153,5.6342134116285,6.4902079919843,3.81034953026459,5.67833197129792,5.59436739344745,7.41754621445952,5.88795680537589,4.80016953339582,4.43689515398344,4.76872379894642,3.34296758254356,5.74067220533517,5.24610568928394,5.12198324043763,8.15516105457313,5.29636043998861,1.68342681497322,5.57584585183618,5.51625101303155,4.91077251803627,6.04253680625267,4.82266527452853,0.499621155875892,7.95367468714389,7.30561583764214,0.382576664137687,0.661774257358546,0.231867835620421 | ||
|short_description=p1@Slc44a4 | |short_description=p1@Slc44a4 | ||
}} | }} |
Latest revision as of 08:59, 26 September 2015
Short description: | p1@Slc44a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc44a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 0bp_to_ENSMUST00000007249, ENSMUST00000171047, ENSMUST00000173664, NM_023557, uc008ceh.2_5end |
EntrezGene: | Slc44a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.76e-07 | 9 |
epithelial cell of alimentary canal | 1.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.43e-22 | 31 |
gastrointestinal system | 4.76e-20 | 47 |
mucosa | 1.64e-12 | 15 |
endoderm-derived structure | 1.84e-11 | 118 |
endoderm | 1.84e-11 | 118 |
presumptive endoderm | 1.84e-11 | 118 |
intestinal mucosa | 4.95e-11 | 13 |
wall of intestine | 4.95e-11 | 13 |
gastrointestinal system mucosa | 4.95e-11 | 13 |
digestive system | 1.24e-10 | 116 |
digestive tract | 1.24e-10 | 116 |
primitive gut | 1.24e-10 | 116 |
subdivision of digestive tract | 1.20e-09 | 114 |
renal system | 6.94e-09 | 19 |
organ component layer | 1.17e-08 | 24 |
urinary system structure | 2.10e-08 | 18 |
epithelium of mucosa | 1.76e-07 | 9 |
gastrointestinal system epithelium | 1.76e-07 | 9 |
intestinal epithelium | 1.76e-07 | 9 |