FFCP PHASE1:Mm9::chr4:128782871..128782885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66260 | |EntrezGene=66260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1437 | |||
|TSSclassifier=NA | |||
|UniProt=A2A7R2 | |UniProt=A2A7R2 | ||
|association_with_transcript=26bp_to_ENSMUST00000030577_5end | |association_with_transcript=26bp_to_ENSMUST00000030577_5end | ||
|cluster_id=chr4:128782871..128782885,+ | |||
|description=CAGE_peak_2_at_Tmem54_5end | |description=CAGE_peak_2_at_Tmem54_5end | ||
|id=chr4:128782871..128782885,+ | |id=chr4:128782871..128782885,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.59e-07!9;CL:0002251!4.59e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.19e-11,9;CL:0002251,9.19e-11,9;CL:0000239,5.58e-07,6;CL:0000677,5.58e-07,6;CL:0000584,5.58e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.31e-21!59;UBERON:0000160!2.36e-19!43;UBERON:0000344!1.21e-11!15;UBERON:0001242!3.00e-10!13;UBERON:0000060!3.00e-10!13;UBERON:0001262!3.00e-10!13;UBERON:0004786!3.00e-10!13;UBERON:0004119!6.02e-09!130;UBERON:0000925!6.02e-09!130;UBERON:0006595!6.02e-09!130;UBERON:0001007!1.35e-08!128;UBERON:0001555!1.35e-08!128;UBERON:0007026!1.35e-08!128;UBERON:0004921!9.32e-08!126;UBERON:0004185!9.32e-08!126;UBERON:0004923!4.27e-07!24;UBERON:0003350!4.59e-07!9;UBERON:0004808!4.59e-07!9;UBERON:0001277!4.59e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.18e-33,47;UBERON:0000160,6.11e-30,31;UBERON:0000344,2.11e-18,15;UBERON:0001242,4.51e-16,13;UBERON:0001262,4.51e-16,13;UBERON:0004786,4.51e-16,13;UBERON:0001007,9.60e-12,116;UBERON:0001555,9.60e-12,116;UBERON:0007026,9.60e-12,116;UBERON:0004119,2.43e-11,118;UBERON:0000925,2.43e-11,118;UBERON:0006595,2.43e-11,118;UBERON:0003350,9.19e-11,9;UBERON:0004808,9.19e-11,9;UBERON:0001277,9.19e-11,9;UBERON:0004921,2.03e-10,114;UBERON:0004923,7.51e-10,24;UBERON:0000485,1.99e-08,11;UBERON:0000014,6.24e-08,5;UBERON:0001003,6.24e-08,5;UBERON:0002097,6.24e-08,5;UBERON:0002199,6.24e-08,5;UBERON:0007029,6.24e-08,5;UBERON:0007376,6.24e-08,5;UBERON:0002416,6.24e-08,5;UBERON:0007383,6.24e-08,5;UBERON:0002108,7.40e-07,4 | |||
|phase1_expression=0.160148847104794,3.83872948403297,4.09499315450582,1.51232105653415,1.50268718983904,4.8684988854448,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,5.59973479776923,6.19405058881359,4.01962374880514,6.46142994238612,5.817723282519,10.2612646506442,9.32511480111744,17.2949798311138,0,0,0,6.35473563452804,6.81562045969819,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.59857431606684,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.180062129805349,0.452114453507145,0,0,0,0,0.646703978798527,0.189106080167819,0.879755620819744,0.43839146485515,1.39023624612799,8.00979983000983,6.1734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,6.61126416658861,0.426576501070468,0.232236671860439,3.22168653305233,3.02525286935014,2.89091456998331,5.89699440948933,2.84717436926707,3.95277491337626,3.01602250560323,4.57599885694647,2.72949721966768,3.59527763461689,3.6743468478698,6.17337947088538,0.379335801906163,0.571242563048644,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0,0.502518772325447,0,0,0,0,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0,0.329940245945071,0,1.69946445308487,3.32555912661226,1.88605079755898,0.590603785761546,0.307435147943927,1.29214146584111,0.727067458955011,0.712994756769443,0,0,0,0,0.720244376125241,0.517434735131018,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,6.10079135883476,7.75029248140347,6.21223126760005,8.47543642422269,9.84845398470368,4.95517422270746,0,0,0,0,0,0,0,0,0,0,17.184071124272,0.474503990371703,1.21991680276109,2.26811215725783,5.22720740036172,7.42432716737004,10.6542833644008,6.69492991375221,14.9200886930897,7.2584385043404,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21635129174099,0.308132871494482,0,0,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0.116876902181569,22.2195775942907,0.221985953374065,0,0,1.9318959403219,0.187682475451182,2.19781949120718,17.1494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,1.70174701947806,0.209613162627982,1.10306105070008,0.222246727801615,1.23621034343337,1.28367683836726,1.01078884705519,0.760437899670719,0.188626341386076,0.749132059759059,0.768301828858431,1.03383844120104,0.952587382566147,0.695305955669133,0.192909220463705,0.824171801606613,0.883193520806384,0,0.887379030796687,0.953744759789284,0.726732083161643,0.376437521661322,0.423073039458382,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.788035859004508,0.409231043169689,0.77468420592983,3.66522560864169,3.49734809113124,1.87145286756327,4.08255002691767,0.57386499620653,1.76473135295612,0.231867835620421 | |phase1_expression=0.160148847104794,3.83872948403297,4.09499315450582,1.51232105653415,1.50268718983904,4.8684988854448,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,5.59973479776923,6.19405058881359,4.01962374880514,6.46142994238612,5.817723282519,10.2612646506442,9.32511480111744,17.2949798311138,0,0,0,6.35473563452804,6.81562045969819,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.59857431606684,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.180062129805349,0.452114453507145,0,0,0,0,0.646703978798527,0.189106080167819,0.879755620819744,0.43839146485515,1.39023624612799,8.00979983000983,6.1734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,6.61126416658861,0.426576501070468,0.232236671860439,3.22168653305233,3.02525286935014,2.89091456998331,5.89699440948933,2.84717436926707,3.95277491337626,3.01602250560323,4.57599885694647,2.72949721966768,3.59527763461689,3.6743468478698,6.17337947088538,0.379335801906163,0.571242563048644,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0,0.502518772325447,0,0,0,0,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0,0.329940245945071,0,1.69946445308487,3.32555912661226,1.88605079755898,0.590603785761546,0.307435147943927,1.29214146584111,0.727067458955011,0.712994756769443,0,0,0,0,0.720244376125241,0.517434735131018,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,6.10079135883476,7.75029248140347,6.21223126760005,8.47543642422269,9.84845398470368,4.95517422270746,0,0,0,0,0,0,0,0,0,0,17.184071124272,0.474503990371703,1.21991680276109,2.26811215725783,5.22720740036172,7.42432716737004,10.6542833644008,6.69492991375221,14.9200886930897,7.2584385043404,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21635129174099,0.308132871494482,0,0,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0.116876902181569,22.2195775942907,0.221985953374065,0,0,1.9318959403219,0.187682475451182,2.19781949120718,17.1494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,1.70174701947806,0.209613162627982,1.10306105070008,0.222246727801615,1.23621034343337,1.28367683836726,1.01078884705519,0.760437899670719,0.188626341386076,0.749132059759059,0.768301828858431,1.03383844120104,0.952587382566147,0.695305955669133,0.192909220463705,0.824171801606613,0.883193520806384,0,0.887379030796687,0.953744759789284,0.726732083161643,0.376437521661322,0.423073039458382,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.788035859004508,0.409231043169689,0.77468420592983,3.66522560864169,3.49734809113124,1.87145286756327,4.08255002691767,0.57386499620653,1.76473135295612,0.231867835620421 | ||
|short_description=p2@Tmem54 | |short_description=p2@Tmem54 | ||
}} | }} |
Latest revision as of 09:08, 26 September 2015
Short description: | p2@Tmem54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem54_5end |
Coexpression cluster: | MCL_coexpression_mm9:1437 |
Association with transcript: | 26bp_to_ENSMUST00000030577_5end |
EntrezGene: | Tmem54 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.19e-11 | 9 |
epithelial cell of alimentary canal | 9.19e-11 | 9 |
brush border epithelial cell | 5.58e-07 | 6 |
gut absorptive cell | 5.58e-07 | 6 |
enterocyte | 5.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.18e-33 | 47 |
intestine | 6.11e-30 | 31 |
mucosa | 2.11e-18 | 15 |
intestinal mucosa | 4.51e-16 | 13 |
wall of intestine | 4.51e-16 | 13 |
gastrointestinal system mucosa | 4.51e-16 | 13 |
digestive system | 9.60e-12 | 116 |
digestive tract | 9.60e-12 | 116 |
primitive gut | 9.60e-12 | 116 |
endoderm-derived structure | 2.43e-11 | 118 |
endoderm | 2.43e-11 | 118 |
presumptive endoderm | 2.43e-11 | 118 |
epithelium of mucosa | 9.19e-11 | 9 |
gastrointestinal system epithelium | 9.19e-11 | 9 |
intestinal epithelium | 9.19e-11 | 9 |
subdivision of digestive tract | 2.03e-10 | 114 |
organ component layer | 7.51e-10 | 24 |
simple columnar epithelium | 1.99e-08 | 11 |
zone of skin | 6.24e-08 | 5 |
skin epidermis | 6.24e-08 | 5 |
skin of body | 6.24e-08 | 5 |
integument | 6.24e-08 | 5 |
surface | 6.24e-08 | 5 |
outer epithelium | 6.24e-08 | 5 |
integumental system | 6.24e-08 | 5 |
enveloping layer of ectoderm | 6.24e-08 | 5 |
small intestine | 7.40e-07 | 4 |