FFCP PHASE1:Mm9::chr4:128784034..128784047,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66260 | |EntrezGene=66260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=61 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUQ8 | |UniProt=D3YUQ8 | ||
|association_with_transcript=-65bp_to_ENSMUST00000148979_5end | |association_with_transcript=-65bp_to_ENSMUST00000148979_5end | ||
|cluster_id=chr4:128784034..128784047,+ | |||
|description=CAGE_peak_4_at_Tmem54_5end | |description=CAGE_peak_4_at_Tmem54_5end | ||
|id=chr4:128784034..128784047,+ | |id=chr4:128784034..128784047,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.69e-07!9;CL:0002251!1.69e-07!9 | |ontology_enrichment_celltype=CL:0002563!1.69e-07!9;CL:0002251!1.69e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.32e-11,9;CL:0002251,7.32e-11,9;CL:0000239,4.60e-08,6;CL:0000677,4.60e-08,6;CL:0000584,4.60e-08,6;CL:0000075,8.60e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.87e-27!59;UBERON:0000160!1.56e-25!43;UBERON:0000344!7.68e-13!15;UBERON:0001242!3.22e-11!13;UBERON:0000060!3.22e-11!13;UBERON:0001262!3.22e-11!13;UBERON:0004786!3.22e-11!13;UBERON:0004923!6.92e-08!24;UBERON:0003350!1.69e-07!9;UBERON:0004808!1.69e-07!9;UBERON:0001277!1.69e-07!9;UBERON:0002108!4.47e-07!16 | |ontology_enrichment_uberon=UBERON:0005409!1.87e-27!59;UBERON:0000160!1.56e-25!43;UBERON:0000344!7.68e-13!15;UBERON:0001242!3.22e-11!13;UBERON:0000060!3.22e-11!13;UBERON:0001262!3.22e-11!13;UBERON:0004786!3.22e-11!13;UBERON:0004923!6.92e-08!24;UBERON:0003350!1.69e-07!9;UBERON:0004808!1.69e-07!9;UBERON:0001277!1.69e-07!9;UBERON:0002108!4.47e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.96e-35,31;UBERON:0005409,3.32e-33,47;UBERON:0000344,3.18e-19,15;UBERON:0001242,1.11e-16,13;UBERON:0001262,1.11e-16,13;UBERON:0004786,1.11e-16,13;UBERON:0003350,7.32e-11,9;UBERON:0004808,7.32e-11,9;UBERON:0001277,7.32e-11,9;UBERON:0004923,1.75e-10,24;UBERON:0001007,8.60e-10,116;UBERON:0001555,8.60e-10,116;UBERON:0007026,8.60e-10,116;UBERON:0004119,1.86e-09,118;UBERON:0000925,1.86e-09,118;UBERON:0006595,1.86e-09,118;UBERON:0000485,1.49e-08,11;UBERON:0004921,1.55e-08,114;UBERON:0002108,1.90e-07,4 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,1.20985684522732,1.50268718983904,2.85394762250213,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,3.44113921600755,2.29692785646008,6.03066794622705,2.80112602491656,11.0213583284697,5.54466285471848,9.3126814475228,0,0,0,1.1554064790051,2.1610503896604,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0.323533699894818,0,0,3.72783522436244,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0,0,0,0,0,0,0,2.089512999133,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,6.08236303326152,0,0,0.515469845288373,4.84040459096022,10.4517680607089,23.9684288901825,3.32170343081158,16.7992933818491,19.8554814952213,24.0737331169792,16.182019230887,4.49409704327111,4.97117514711797,2.98711909881551,0.758671603812327,0.571242563048644,0,1.4255592949172,0.969762435838129,0.49095073923223,1.13825766823663,0.590440591918409,0.784993639206874,0.740382983530803,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,1.209294227859,6.97838795096823,5.31543407185391,2.76691633149535,3.87642439752332,1.45413491791002,5.34746067577082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0.645857706783622,0.844380948994182,0.716234064018819,1.96969079694074,4.37221254944776,0,0,0.82554747185289,0,0,0,0,0,0,0,2.86401185404534,0,0.406638934253697,1.62008011232702,1.46361807210128,3.9305261474312,1.61837215661785,0.991841468704031,1.83229159388821,2.33306951925227,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.919217542250071,0.666740183404846,0.618105171716683,1.60459604795908,0.252697211763798,0.760437899670719,1.50901073108861,0.936415074698824,0.640251524048693,0.861532034334199,0,0.463537303779422,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,1.59728225543404,0.476872379894642,1.45346416632329,1.12931256498397,0.592302255241736,0.914639864363863,0.526139422875686,0.543216455383447,1.12228454331548,0.355905054372522,0.394017929502254,0.818462086339379,1.08455788830176,1.15743966588685,1.24905288968973,0.701794825336225,1.07435527024149,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,1.74487703819681,2.27499619694768,1.20985684522732,1.50268718983904,2.85394762250213,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,3.44113921600755,2.29692785646008,6.03066794622705,2.80112602491656,11.0213583284697,5.54466285471848,9.3126814475228,0,0,0,1.1554064790051,2.1610503896604,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0.323533699894818,0,0,3.72783522436244,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0,0,0,0,0,0,0,2.089512999133,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,6.08236303326152,0,0,0.515469845288373,4.84040459096022,10.4517680607089,23.9684288901825,3.32170343081158,16.7992933818491,19.8554814952213,24.0737331169792,16.182019230887,4.49409704327111,4.97117514711797,2.98711909881551,0.758671603812327,0.571242563048644,0,1.4255592949172,0.969762435838129,0.49095073923223,1.13825766823663,0.590440591918409,0.784993639206874,0.740382983530803,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,1.209294227859,6.97838795096823,5.31543407185391,2.76691633149535,3.87642439752332,1.45413491791002,5.34746067577082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0.645857706783622,0.844380948994182,0.716234064018819,1.96969079694074,4.37221254944776,0,0,0.82554747185289,0,0,0,0,0,0,0,2.86401185404534,0,0.406638934253697,1.62008011232702,1.46361807210128,3.9305261474312,1.61837215661785,0.991841468704031,1.83229159388821,2.33306951925227,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.919217542250071,0.666740183404846,0.618105171716683,1.60459604795908,0.252697211763798,0.760437899670719,1.50901073108861,0.936415074698824,0.640251524048693,0.861532034334199,0,0.463537303779422,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,1.59728225543404,0.476872379894642,1.45346416632329,1.12931256498397,0.592302255241736,0.914639864363863,0.526139422875686,0.543216455383447,1.12228454331548,0.355905054372522,0.394017929502254,0.818462086339379,1.08455788830176,1.15743966588685,1.24905288968973,0.701794825336225,1.07435527024149,0,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Tmem54 | |short_description=p4@Tmem54 | ||
}} | }} |
Latest revision as of 09:08, 26 September 2015
Short description: | p4@Tmem54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmem54_5end |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | -65bp_to_ENSMUST00000148979_5end |
EntrezGene: | Tmem54 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.32e-11 | 9 |
epithelial cell of alimentary canal | 7.32e-11 | 9 |
brush border epithelial cell | 4.60e-08 | 6 |
gut absorptive cell | 4.60e-08 | 6 |
enterocyte | 4.60e-08 | 6 |
columnar/cuboidal epithelial cell | 8.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.96e-35 | 31 |
gastrointestinal system | 3.32e-33 | 47 |
mucosa | 3.18e-19 | 15 |
intestinal mucosa | 1.11e-16 | 13 |
wall of intestine | 1.11e-16 | 13 |
gastrointestinal system mucosa | 1.11e-16 | 13 |
epithelium of mucosa | 7.32e-11 | 9 |
gastrointestinal system epithelium | 7.32e-11 | 9 |
intestinal epithelium | 7.32e-11 | 9 |
organ component layer | 1.75e-10 | 24 |
digestive system | 8.60e-10 | 116 |
digestive tract | 8.60e-10 | 116 |
primitive gut | 8.60e-10 | 116 |
endoderm-derived structure | 1.86e-09 | 118 |
endoderm | 1.86e-09 | 118 |
presumptive endoderm | 1.86e-09 | 118 |
simple columnar epithelium | 1.49e-08 | 11 |
subdivision of digestive tract | 1.55e-08 | 114 |
small intestine | 1.90e-07 | 4 |