FFCP PHASE1:Mm9::chr17:35301805..35301834,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:35301805..35301834,- to FFCP PHASE1:Mm9::chr17:35301805..35301834,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=53761 | |EntrezGene=53761 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=376 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TSC1 | |UniProt=Q7TSC1 | ||
|association_with_transcript=0bp_to_NM_001199044,NM_020027,uc008cgj.2,uc008cgk.2_5end | |||
|cluster_id=chr17:35301805..35301834,- | |||
|description=CAGE_peak_1_at_Prrc2a_5end | |||
|id=chr17:35301805..35301834,- | |||
|ontology_enrichment_celltype=CL:0002319!4.93e-12!43;CL:0000221!1.87e-11!44;CL:0000133!1.87e-11!44;CL:0000540!3.96e-09!33;CL:0000047!3.96e-09!33;CL:0000031!3.96e-09!33;CL:0000404!3.96e-09!33;CL:0000055!3.71e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.93e-12,43;CL:0000221,1.87e-11,44;CL:0000133,1.87e-11,44;CL:0000540,3.96e-09,33;CL:0000047,3.96e-09,33;CL:0000031,3.96e-09,33;CL:0000404,3.96e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.26e-12!73;UBERON:0005743!4.26e-12!73;UBERON:0000073!1.28e-11!75;UBERON:0001016!1.28e-11!75;UBERON:0004121!2.32e-09!102;UBERON:0000924!2.32e-09!102;UBERON:0006601!2.32e-09!102;UBERON:0000153!5.16e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-12,73;UBERON:0001016,1.28e-11,75;UBERON:0004121,6.45e-11,95;UBERON:0000924,6.45e-11,95;UBERON:0006601,6.45e-11,95;UBERON:0002346,2.16e-07,64;UBERON:0003075,2.16e-07,64;UBERON:0007284,2.16e-07,64;UBERON:0010371,3.77e-07,73;UBERON:0000073,6.35e-07,54 | |||
|phase1_expression=98.8118386636579,88.6397535403977,90.0898493991281,66.8445906988094,68.6227150026496,117.179731794499,106.52736411156,75.6662675367637,149.658411647222,150.035361372398,113.51751293351,115.749402702233,90.3939854036766,84.2732679319135,105.595794495565,83.2173348972185,93.0417297910435,99.0551199224866,105.029656141996,101.429126779729,180.802034861174,78.4398514486994,65.0387474955949,76.7963629408352,66.9875100716136,76.3728512272977,69.7834433777701,81.2326547225802,53.2065574477847,58.4709901043039,60.5324294088982,170.188220487181,284.159931864071,95.0890086092632,59.7922852885138,50.8678014796987,56.7590810409386,79.5210098400125,53.1308034276184,64.916944252751,66.4701581475046,80.5993672250966,86.9063531925765,77.6783366909312,85.4607530180508,102.419087706218,355.20567033401,211.048351376272,210.23967687689,176.931208157598,163.224167615173,162.440397732418,122.816867634263,165.382568378587,200.647998088051,114.994967908068,100.859770858442,114.479204485592,221.13189171954,198.900608206284,180.008118595755,190.091782490783,211.652161474451,157.032500665604,180.962544349756,191.119150920501,242.076889298871,281.632017800699,224.07325219862,208.719180660794,208.642361660571,148.824162874382,137.821969553807,210.316702252076,253.511270843235,161.782506443364,125.532104339303,166.63197620117,143.007682461563,222.096508537646,229.908448372855,194.300687217671,115.581761586572,109.738708956178,124.5305719381,169.411436647359,176.967999233285,172.978685725879,88.8268247798249,138.144811875204,86.3796176331,43.0211938490693,50.9978500280813,70.1614149129162,73.4247351715866,70.3402212742817,86.6542072212909,117.256061933704,72.4802952842004,93.2816476707298,101.266418819433,182.223597928331,298.122130456775,263.094680166733,43.514699243254,52.1921322878703,43.9806267162861,71.2507409446934,340.244379112384,132.707272323953,136.185981511417,98.3423494948216,108.158668213091,90.2828616910209,100.773522015299,102.795271707675,112.720905286874,130.7178186556,116.768592857383,140.898926304193,136.259216890063,105.217929930343,80.1484573237925,141.705905753589,122.316876779058,90.9427116542585,59.9075622529601,49.1920239414594,45.7452817463033,122.37895239374,170.190224248529,158.324483662209,131.585010385553,121.209126774577,142.334810523299,128.495080349664,138.807052927981,105.123890165529,113.219795778286,117.847439296425,162.130071931529,102.996142786196,198.248404915689,148.293540750344,155.735546557389,138.747159068492,143.176235127266,84.3372988609191,266.010903279127,235.437069808935,199.17667255359,147.957119388613,131.516348883708,156.713474934975,129.848528073412,128.377102097928,40.7283648641676,60.7341060790728,47.1711408996684,158.036964444588,133.210802069263,121.721953547646,169.509230679011,144.228181870847,137.760531808429,141.613172352998,141.648355938999,100.534959778133,134.77451707914,104.410507154305,129.061544797002,87.4275924803487,100.553952803301,85.0868694940757,163.815869931455,159.090530738374,64.7620814648244,110.540336865362,185.987354466724,156.991990177656,188.533095914223,162.556920846414,124.976460640817,94.1616849257168,76.3991789086664,82.5141763167294,78.6679203544844,79.5825888164603,89.6834800747953,97.0724961346559,73.486936957396,76.8685314761857,155.527678781527,136.526972568626,208.509310995199,141.130370196803,134.409073607165,124.070265385974,127.421622305378,113.807424092273,83.9943193951355,68.7322203044429,67.2947463487828,181.861165230543,143.488066432638,145.485786713,134.901980723354,126.618008870019,81.2256467182729,125.435515928553,67.4482543384147,65.0710549255753,205.588535334117,77.7774580627172,82.377945702244,83.603608600494,87.3665403851712,51.6214567858803,109.004382198297,133.401953886421,217.069348620778,152.600832111894,153.722112628969,176.719101601116,157.346846625655,144.398899414771,143.60561628074,130.22123751348,154.671125597762,88.158463317067,106.201263847526,98.9399560697539,67.8560777726725,59.2857195362393,126.875182438911,123.895599090825,107.729445881808,100.802050469295,138.197158952537,98.9686034641142,160.278175463458,163.984272604588,180.309383902353,181.61628644394,192.052457059024,213.156627683991,179.735951543653,152.557557829705,179.460651187722,150.699697401828,157.979314836803,154.917075190512,146.598263418218,180.807254777899,114.160818972368,138.142181972184,142.092071773433,105.807449743059,168.32207894204,112.213828999534,108.539883130653,110.150720031684,116.218145353419,104.292130118819,91.7141894602489,101.072832383223,141.282436387822,161.154679158023,177.480114149939,146.820868996641,181.419059016046,176.228391790846,142.170353800233,160.148563234279,126.957394062467,72.4465682354265,101.884119901392,253.100398265172,122.874428715584,179.672203360976,127.728408083356,146.24954167285,80.157230073209,122.936975232968,117.559165988923,165.109494370578,125.006305974555,88.1564378781954,135.600673899257,101.577508903696,84.1393228469584,90.2686867487594,80.1559848065658,72.5549669691486,195.97014802351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| |phase1_expression=98.8118386636579,88.6397535403977,90.0898493991281,66.8445906988094,68.6227150026496,117.179731794499,106.52736411156,75.6662675367637,149.658411647222,150.035361372398,113.51751293351,115.749402702233,90.3939854036766,84.2732679319135,105.595794495565,83.2173348972185,93.0417297910435,99.0551199224866,105.029656141996,101.429126779729,180.802034861174,78.4398514486994,65.0387474955949,76.7963629408352,66.9875100716136,76.3728512272977,69.7834433777701,81.2326547225802,53.2065574477847,58.4709901043039,60.5324294088982,170.188220487181,284.159931864071,95.0890086092632,59.7922852885138,50.8678014796987,56.7590810409386,79.5210098400125,53.1308034276184,64.916944252751,66.4701581475046,80.5993672250966,86.9063531925765,77.6783366909312,85.4607530180508,102.419087706218,355.20567033401,211.048351376272,210.23967687689,176.931208157598,163.224167615173,162.440397732418,122.816867634263,165.382568378587,200.647998088051,114.994967908068,100.859770858442,114.479204485592,221.13189171954,198.900608206284,180.008118595755,190.091782490783,211.652161474451,157.032500665604,180.962544349756,191.119150920501,242.076889298871,281.632017800699,224.07325219862,208.719180660794,208.642361660571,148.824162874382,137.821969553807,210.316702252076,253.511270843235,161.782506443364,125.532104339303,166.63197620117,143.007682461563,222.096508537646,229.908448372855,194.300687217671,115.581761586572,109.738708956178,124.5305719381,169.411436647359,176.967999233285,172.978685725879,88.8268247798249,138.144811875204,86.3796176331,43.0211938490693,50.9978500280813,70.1614149129162,73.4247351715866,70.3402212742817,86.6542072212909,117.256061933704,72.4802952842004,93.2816476707298,101.266418819433,182.223597928331,298.122130456775,263.094680166733,43.514699243254,52.1921322878703,43.9806267162861,71.2507409446934,340.244379112384,132.707272323953,136.185981511417,98.3423494948216,108.158668213091,90.2828616910209,100.773522015299,102.795271707675,112.720905286874,130.7178186556,116.768592857383,140.898926304193,136.259216890063,105.217929930343,80.1484573237925,141.705905753589,122.316876779058,90.9427116542585,59.9075622529601,49.1920239414594,45.7452817463033,122.37895239374,170.190224248529,158.324483662209,131.585010385553,121.209126774577,142.334810523299,128.495080349664,138.807052927981,105.123890165529,113.219795778286,117.847439296425,162.130071931529,102.996142786196,198.248404915689,148.293540750344,155.735546557389,138.747159068492,143.176235127266,84.3372988609191,266.010903279127,235.437069808935,199.17667255359,147.957119388613,131.516348883708,156.713474934975,129.848528073412,128.377102097928,40.7283648641676,60.7341060790728,47.1711408996684,158.036964444588,133.210802069263,121.721953547646,169.509230679011,144.228181870847,137.760531808429,141.613172352998,141.648355938999,100.534959778133,134.77451707914,104.410507154305,129.061544797002,87.4275924803487,100.553952803301,85.0868694940757,163.815869931455,159.090530738374,64.7620814648244,110.540336865362,185.987354466724,156.991990177656,188.533095914223,162.556920846414,124.976460640817,94.1616849257168,76.3991789086664,82.5141763167294,78.6679203544844,79.5825888164603,89.6834800747953,97.0724961346559,73.486936957396,76.8685314761857,155.527678781527,136.526972568626,208.509310995199,141.130370196803,134.409073607165,124.070265385974,127.421622305378,113.807424092273,83.9943193951355,68.7322203044429,67.2947463487828,181.861165230543,143.488066432638,145.485786713,134.901980723354,126.618008870019,81.2256467182729,125.435515928553,67.4482543384147,65.0710549255753,205.588535334117,77.7774580627172,82.377945702244,83.603608600494,87.3665403851712,51.6214567858803,109.004382198297,133.401953886421,217.069348620778,152.600832111894,153.722112628969,176.719101601116,157.346846625655,144.398899414771,143.60561628074,130.22123751348,154.671125597762,88.158463317067,106.201263847526,98.9399560697539,67.8560777726725,59.2857195362393,126.875182438911,123.895599090825,107.729445881808,100.802050469295,138.197158952537,98.9686034641142,160.278175463458,163.984272604588,180.309383902353,181.61628644394,192.052457059024,213.156627683991,179.735951543653,152.557557829705,179.460651187722,150.699697401828,157.979314836803,154.917075190512,146.598263418218,180.807254777899,114.160818972368,138.142181972184,142.092071773433,105.807449743059,168.32207894204,112.213828999534,108.539883130653,110.150720031684,116.218145353419,104.292130118819,91.7141894602489,101.072832383223,141.282436387822,161.154679158023,177.480114149939,146.820868996641,181.419059016046,176.228391790846,142.170353800233,160.148563234279,126.957394062467,72.4465682354265,101.884119901392,253.100398265172,122.874428715584,179.672203360976,127.728408083356,146.24954167285,80.157230073209,122.936975232968,117.559165988923,165.109494370578,125.006305974555,88.1564378781954,135.600673899257,101.577508903696,84.1393228469584,90.2686867487594,80.1559848065658,72.5549669691486,195.97014802351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| ||
|short_description=p1@Prrc2a | |||
}} | }} |
Latest revision as of 09:40, 26 September 2015
Short description: | p1@Prrc2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prrc2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 0bp_to_NM_001199044, NM_020027, uc008cgj.2, uc008cgk.2_5end |
EntrezGene: | Prrc2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.93e-12 | 43 |
ectodermal cell | 1.87e-11 | 44 |
neurectodermal cell | 1.87e-11 | 44 |
neuron | 3.96e-09 | 33 |
neuronal stem cell | 3.96e-09 | 33 |
neuroblast | 3.96e-09 | 33 |
electrically signaling cell | 3.96e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.26e-12 | 73 |
nervous system | 1.28e-11 | 75 |
ectoderm-derived structure | 6.45e-11 | 95 |
ectoderm | 6.45e-11 | 95 |
presumptive ectoderm | 6.45e-11 | 95 |
neurectoderm | 2.16e-07 | 64 |
neural plate | 2.16e-07 | 64 |
presumptive neural plate | 2.16e-07 | 64 |
ecto-epithelium | 3.77e-07 | 73 |
regional part of nervous system | 6.35e-07 | 54 |