FFCP PHASE1:Mm9::chr4:129419477..129419512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20218 | |EntrezGene=20218 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2396 | |MCL_coexpression_id=2396 | ||
|TSSclassifier=NA | |||
|UniProt=Q60749 | |UniProt=Q60749 | ||
|association_with_transcript=13bp_to_uc008uyc.1,uc008uyd.1,uc008uye.1_5end | |association_with_transcript=13bp_to_uc008uyc.1,uc008uyd.1,uc008uye.1_5end | ||
|cluster_id=chr4:129419477..129419512,- | |||
|description=CAGE_peak_2_at_Khdrbs1_5end | |description=CAGE_peak_2_at_Khdrbs1_5end | ||
|id=chr4:129419477..129419512,- | |id=chr4:129419477..129419512,- | ||
|ontology_enrichment_celltype=CL:0000540!1.12e-07!33;CL:0000047!1.12e-07!33;CL:0000031!1.12e-07!33;CL:0000404!1.12e-07!33 | |ontology_enrichment_celltype=CL:0000540!1.12e-07!33;CL:0000047!1.12e-07!33;CL:0000031!1.12e-07!33;CL:0000404!1.12e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.83e-09!23;UBERON:0000974!4.83e-09!23;UBERON:0004807!4.83e-09!23;UBERON:0005058!4.83e-09!23;UBERON:0003351!4.83e-09!23;UBERON:0009113!4.83e-09!23;UBERON:0003295!4.83e-09!23;UBERON:0009722!4.83e-09!23;UBERON:0005562!4.83e-09!23;UBERON:0007690!4.83e-09!23;UBERON:0004177!5.29e-09!29;UBERON:0006562!3.29e-08!24;UBERON:0001557!3.29e-08!24;UBERON:0001042!3.29e-08!24;UBERON:0008814!3.29e-08!24;UBERON:0009145!3.29e-08!24;UBERON:0003408!5.82e-08!24 | |ontology_enrichment_uberon=UBERON:0002370!4.83e-09!23;UBERON:0000974!4.83e-09!23;UBERON:0004807!4.83e-09!23;UBERON:0005058!4.83e-09!23;UBERON:0003351!4.83e-09!23;UBERON:0009113!4.83e-09!23;UBERON:0003295!4.83e-09!23;UBERON:0009722!4.83e-09!23;UBERON:0005562!4.83e-09!23;UBERON:0007690!4.83e-09!23;UBERON:0004177!5.29e-09!29;UBERON:0006562!3.29e-08!24;UBERON:0001557!3.29e-08!24;UBERON:0001042!3.29e-08!24;UBERON:0008814!3.29e-08!24;UBERON:0009145!3.29e-08!24;UBERON:0003408!5.82e-08!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.17e-10,43;UBERON:0002370,4.83e-09,23;UBERON:0000974,4.83e-09,23;UBERON:0004807,4.83e-09,23;UBERON:0005058,4.83e-09,23;UBERON:0003351,4.83e-09,23;UBERON:0009113,4.83e-09,23;UBERON:0003295,4.83e-09,23;UBERON:0009722,4.83e-09,23;UBERON:0005562,4.83e-09,23;UBERON:0007690,4.83e-09,23;UBERON:0004177,5.29e-09,29;UBERON:0005057,5.29e-09,29;UBERON:0007811,1.02e-08,36;UBERON:0006562,3.29e-08,24;UBERON:0001557,3.29e-08,24;UBERON:0001042,3.29e-08,24;UBERON:0008814,3.29e-08,24;UBERON:0009145,3.29e-08,24;UBERON:0003408,5.82e-08,24 | |||
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|phase1_expression=36.3537882927882,19.8915982354436,15.0149748998547,14.8207463540347,24.543890767371,22.6637017081051,17.2873354040689,55.9103990502025,98.5521055061667,96.9027138973053,44.3454537704058,43.874687447435,40.5745729936958,51.2283558175325,25.9825614216217,18.4252493324742,18.1886088313318,34.543107106727,34.0043795342232,28.00971701867,19.474913444595,34.9504148227116,24.0303806007821,16.6392119705143,20.8762445771125,17.8011908875656,20.2458138194765,15.7293999860699,18.6222951067246,23.1867719379136,19.9557459589774,13.3356441426523,17.8368788399525,31.6963362030877,17.0422455653252,19.2832188615851,17.9669033510885,25.1118978442145,15.626706890476,13.6116173433188,18.2351761289614,22.5405010036287,24.2755176515577,17.7514513345564,20.0726323814639,17.2533947031981,12.5182615095686,15.6978112593922,14.7189742432096,11.665793944457,14.5585878490377,10.062679505548,35.4021298781824,62.3811442129756,50.7501636705121,19.8089765747679,12.0344044774278,13.4074743992135,56.2439761189682,53.9570798857474,53.8756692980252,14.2314703469035,12.450127145556,14.3983954765024,8.89979726310277,11.3676818391376,16.4780060785123,16.1371688235053,47.2824632126658,50.3572149977206,47.7437662267637,18.2816630018434,17.2277461942259,60.8779272098322,60.6701831545436,46.8801581171111,20.9220173898839,20.3022867555448,19.3544231902867,63.0416455350327,57.0882896079036,50.007683573449,19.2636269310953,22.5105044012672,20.933359945423,23.5702868378934,20.5015220350708,45.8542636730239,14.7666076999709,21.6134661905407,33.3344162006929,6.88339101585109,14.2793980078628,10.2543606411185,9.09686984426737,13.8888335000174,15.308441794361,16.1908806449155,13.768658243952,12.3668851078619,31.8306128695298,8.98285341900225,7.64415719119937,14.2213340630666,15.5873549528074,16.4683912558814,21.7375511356357,14.0446172054444,28.7421050848361,15.289540323677,36.6054039476547,23.1393763517227,24.9064737036543,21.7040602395776,25.7519268627194,17.8446559688139,20.7643772896874,15.9059292611903,16.8076004870476,21.6767578929528,18.5506875506731,21.3345111379498,24.2309289583559,20.4946557908083,20.7352239745321,26.5675337416935,34.0274953596814,37.7938720525847,26.1764667770513,21.8694333531041,23.33253074375,40.3350470282295,13.5582969749976,10.9957646652042,27.8435979709811,15.8996437806402,25.9690377818307,18.9098595327341,10.3616330957807,13.4682787767343,50.486731869529,44.6010082600937,38.8934200379554,28.4832105709501,36.1273810493551,34.3344770363397,27.64200874512,24.0594134787285,72.430845625435,52.5714902866538,46.6270479034464,35.7289043856947,28.0827721717854,24.3776516565517,17.9030458674911,33.6367910923253,30.1951670544691,30.3670530395364,27.8480229407681,39.5610225542809,35.1789089971644,27.5494954035353,34.3279866598555,29.9081632256054,25.1455394006427,30.4619467623034,32.7293549707535,24.8710179242071,24.1902979372816,20.1925980817287,18.7268950050927,17.1053985287639,19.5399602609035,14.4942932261202,10.0939175310781,25.1087254205454,19.1642894130603,16.6603856998033,46.496838616681,34.6032641072053,28.995178797471,24.4037064794244,22.9049385160216,16.1691782195675,23.7264530772256,21.0814662046734,21.8661631656234,20.8904295643208,16.182019230887,22.4704852163555,19.4524244887225,19.1175622324193,61.2627320078454,42.3861981782094,36.0664754153857,32.7878637830956,29.6747305366467,33.1041069882304,25.1049052383301,16.3847264257358,15.5428740562961,13.9438795231635,13.6368208460088,26.528371808859,26.5354643402824,20.2375901146368,13.3887680116412,17.364755502174,20.1154422907322,14.6725030099913,23.5096078823801,14.0026320725922,15.814502718009,21.2120340171047,15.2898459826135,14.1444171650383,11.4814344654024,16.4030797263545,19.7685913478267,46.2359044719983,40.4153141576224,36.1557032701151,27.2240688014662,26.1309761609233,26.1848004974615,31.02625000939,28.2166907950082,26.3542980682042,25.9911272911704,16.0586048421423,16.2323882953942,17.3578870297814,12.0633027151418,14.1415477792864,11.3105782794378,14.9005843004556,24.0825884981688,21.4497386463732,32.4591191845817,13.3809591418318,43.5401342794434,37.0916807081807,50.8399218649405,50.4224163679885,39.6581639866662,53.7845408498782,50.6013377093618,42.6693552550515,47.0392455756363,33.4174169078679,20.4393722699907,22.7923972694087,25.2474786998043,23.4257574621,10.619611067197,28.4053344301328,24.7905316711096,19.0491130553457,12.6979813938732,15.3717573971964,21.4495483329624,18.9037539328303,16.3988794056972,10.1131762539461,6.32511651449993,7.21948802737308,31.3204437293485,43.3947236615458,38.6782464510436,36.6516329904023,39.9015525695116,38.8844022372514,32.0870590174136,26.4884505729701,21.8244688499251,15.2519091021951,13.4522322813527,11.3771514529621,24.5425928577776,20.3857686257167,17.7864792564673,16.2499490747611,26.5247561333164,20.7676338251771,26.655857404465,27.2430665711454,25.7420393043899,22.0391094695488,30.0727300986255,27.9109371311958,39.0950388985867,48.283251051662,44.5003915650245,13.3653886522116,46.5013910564269,3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| ||
|short_description=p2@Khdrbs1 | |short_description=p2@Khdrbs1 | ||
}} | }} |
Latest revision as of 09:43, 26 September 2015
Short description: | p2@Khdrbs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Khdrbs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2396 |
Association with transcript: | 13bp_to_uc008uyc.1, uc008uyd.1, uc008uye.1_5end |
EntrezGene: | Khdrbs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.12e-07 | 33 |
neuronal stem cell | 1.12e-07 | 33 |
neuroblast | 1.12e-07 | 33 |
electrically signaling cell | 1.12e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 5.17e-10 | 43 |
thymus | 4.83e-09 | 23 |
neck | 4.83e-09 | 23 |
respiratory system epithelium | 4.83e-09 | 23 |
hemolymphoid system gland | 4.83e-09 | 23 |
pharyngeal epithelium | 4.83e-09 | 23 |
thymic region | 4.83e-09 | 23 |
pharyngeal gland | 4.83e-09 | 23 |
entire pharyngeal arch endoderm | 4.83e-09 | 23 |
thymus primordium | 4.83e-09 | 23 |
early pharyngeal endoderm | 4.83e-09 | 23 |
hemopoietic organ | 5.29e-09 | 29 |
immune organ | 5.29e-09 | 29 |
craniocervical region | 1.02e-08 | 36 |
pharynx | 3.29e-08 | 24 |
upper respiratory tract | 3.29e-08 | 24 |
chordate pharynx | 3.29e-08 | 24 |
pharyngeal arch system | 3.29e-08 | 24 |
pharyngeal region of foregut | 3.29e-08 | 24 |
gland of gut | 5.82e-08 | 24 |