FFCP PHASE1:Mm9::chr14:75597728..75597749,+: Difference between revisions
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{{FFCP|EntrezGene=18826|HGNC=|MCL_coexpression_id=1669|UniProt=|association_with_transcript=21bp_to_ENSMUST00000130510_5end|description=CAGE_peak_12_at_Lcp1_5end|id=chr14:75597728..75597749,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,2.69e-14,3;CL:0002563,2.14e-12,9;CL:0002251,2.14e-12,9;CL:0000066,6.46e-08,25;CL:0002076,2.42e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.98e-19!59;UBERON:0000160!2.85e-15!43;UBERON:0000344!2.46e-11!15;UBERON:0004923!5.01e-10!24;UBERON:0004119!1.23e-09!130;UBERON:0000925!1.23e-09!130;UBERON:0006595!1.23e-09!130;UBERON:0001242!7.68e-09!13;UBERON:0000060!7.68e-09!13;UBERON:0001262!7.68e-09!13;UBERON:0004786!7.68e-09!13;UBERON:0001007!1.49e-08!128;UBERON:0001555!1.49e-08!128;UBERON:0007026!1.49e-08!128;UBERON:0004921!2.41e-07!126;UBERON:0004185!2.41e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.56e-28,31;UBERON:0005409,1.29e-20,47;UBERON:0000344,1.07e-17,15;UBERON:0004923,1.27e-13,24;UBERON:0003350,2.14e-12,9;UBERON:0004808,2.14e-12,9;UBERON:0001277,2.14e-12,9;UBERON:0001242,6.65e-12,13;UBERON:0001262,6.65e-12,13;UBERON:0004786,6.65e-12,13;UBERON:0000485,4.21e-10,11;UBERON:0001962,2.67e-09,2;UBERON:0001961,2.67e-09,2;UBERON:0001744,2.67e-09,2;UBERON:0001007,5.25e-09,116;UBERON:0001555,5.25e-09,116;UBERON:0007026,5.25e-09,116;UBERON:0004119,8.41e-09,118;UBERON:0000925,8.41e-09,118;UBERON:0006595,8.41e-09,118;UBERON:0004921,6.72e-07,114|phase1_expression=0,0.697950815278722,0,0,0,2.35030980676646,2.56973904655078,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0,0,0,1.43993180514066,2.06468352960453,2.29692785646008,0.86152399231815,1.72376986148711,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,5.48818077527422,2.99222361645286,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,6.42706916109372,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0.696710015581316,1.15980715189884,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,4.28217282282428,4.27269854960458,1.79060824837036,1.75467678407208,0.898819408654221,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.648032044930808,0.627264888043406,0.655087691238533,0.674321731924103,0.743881101528023,1.57053565190418,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.814824683075171,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p12@Lcp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18826 | |||
|HGNC= | |||
|MCL_coexpression_id=1669 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENSMUST00000130510_5end | |||
|cluster_id=chr14:75597728..75597749,+ | |||
|description=CAGE_peak_12_at_Lcp1_5end | |||
|id=chr14:75597728..75597749,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.69e-14,3;CL:0002563,2.14e-12,9;CL:0002251,2.14e-12,9;CL:0000066,6.46e-08,25;CL:0002076,2.42e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.98e-19!59;UBERON:0000160!2.85e-15!43;UBERON:0000344!2.46e-11!15;UBERON:0004923!5.01e-10!24;UBERON:0004119!1.23e-09!130;UBERON:0000925!1.23e-09!130;UBERON:0006595!1.23e-09!130;UBERON:0001242!7.68e-09!13;UBERON:0000060!7.68e-09!13;UBERON:0001262!7.68e-09!13;UBERON:0004786!7.68e-09!13;UBERON:0001007!1.49e-08!128;UBERON:0001555!1.49e-08!128;UBERON:0007026!1.49e-08!128;UBERON:0004921!2.41e-07!126;UBERON:0004185!2.41e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.56e-28,31;UBERON:0005409,1.29e-20,47;UBERON:0000344,1.07e-17,15;UBERON:0004923,1.27e-13,24;UBERON:0003350,2.14e-12,9;UBERON:0004808,2.14e-12,9;UBERON:0001277,2.14e-12,9;UBERON:0001242,6.65e-12,13;UBERON:0001262,6.65e-12,13;UBERON:0004786,6.65e-12,13;UBERON:0000485,4.21e-10,11;UBERON:0001962,2.67e-09,2;UBERON:0001961,2.67e-09,2;UBERON:0001744,2.67e-09,2;UBERON:0001007,5.25e-09,116;UBERON:0001555,5.25e-09,116;UBERON:0007026,5.25e-09,116;UBERON:0004119,8.41e-09,118;UBERON:0000925,8.41e-09,118;UBERON:0006595,8.41e-09,118;UBERON:0004921,6.72e-07,114 | |||
|phase1_expression=0,0.697950815278722,0,0,0,2.35030980676646,2.56973904655078,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0,0,0,1.43993180514066,2.06468352960453,2.29692785646008,0.86152399231815,1.72376986148711,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,5.48818077527422,2.99222361645286,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,6.42706916109372,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0.696710015581316,1.15980715189884,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,4.28217282282428,4.27269854960458,1.79060824837036,1.75467678407208,0.898819408654221,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.648032044930808,0.627264888043406,0.655087691238533,0.674321731924103,0.743881101528023,1.57053565190418,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.814824683075171,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p12@Lcp1 | |||
}} |
Latest revision as of 09:50, 26 September 2015
Short description: | p12@Lcp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Lcp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1669 |
Association with transcript: | 21bp_to_ENSMUST00000130510_5end |
EntrezGene: | Lcp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.69e-14 | 3 |
intestinal epithelial cell | 2.14e-12 | 9 |
epithelial cell of alimentary canal | 2.14e-12 | 9 |
epithelial cell | 6.46e-08 | 25 |
endo-epithelial cell | 2.42e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.56e-28 | 31 |
gastrointestinal system | 1.29e-20 | 47 |
mucosa | 1.07e-17 | 15 |
organ component layer | 1.27e-13 | 24 |
epithelium of mucosa | 2.14e-12 | 9 |
gastrointestinal system epithelium | 2.14e-12 | 9 |
intestinal epithelium | 2.14e-12 | 9 |
intestinal mucosa | 6.65e-12 | 13 |
wall of intestine | 6.65e-12 | 13 |
gastrointestinal system mucosa | 6.65e-12 | 13 |
simple columnar epithelium | 4.21e-10 | 11 |
gut-associated lymphoid tissue | 2.67e-09 | 2 |
mucosa-associated lymphoid tissue | 2.67e-09 | 2 |
lymphoid tissue | 2.67e-09 | 2 |
digestive system | 5.25e-09 | 116 |
digestive tract | 5.25e-09 | 116 |
primitive gut | 5.25e-09 | 116 |
endoderm-derived structure | 8.41e-09 | 118 |
endoderm | 8.41e-09 | 118 |
presumptive endoderm | 8.41e-09 | 118 |
subdivision of digestive tract | 6.72e-07 | 114 |