FFCP PHASE1:Mm9::chr17:35342428..35342455,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr17:35342428..35342455,- to FFCP PHASE1:Mm9::chr17:35342428..35342455,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16992 | |EntrezGene=16992 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=P09225,Q542S2 | |UniProt=P09225,Q542S2 | ||
|association_with_transcript=-132bp_to_ENSMUST00000025266,NM_010735,uc008cgu.2_5end | |||
|cluster_id=chr17:35342428..35342455,- | |||
|description=CAGE_peak_2_at_Lta_5end | |||
|id=chr17:35342428..35342455,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.60e-21,6;CL:0000556,5.60e-21,6;CL:0000050,5.84e-14,9;CL:0002031,5.72e-12,25;CL:0000839,1.27e-09,13;CL:0000988,3.88e-09,32;CL:0002032,3.88e-09,32;CL:0000037,3.88e-09,32;CL:0000837,3.88e-09,32;CL:0000763,8.74e-08,16;CL:0002027,3.22e-07,3;CL:0002006,3.22e-07,3;CL:0002024,3.22e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.63e-17!48;UBERON:0004177!2.00e-15!29;UBERON:0002390!4.92e-14!45;UBERON:0003061!4.92e-14!45;UBERON:0003408!5.23e-12!24;UBERON:0002405!1.71e-11!70;UBERON:0002370!6.13e-11!23;UBERON:0000974!6.13e-11!23;UBERON:0004807!6.13e-11!23;UBERON:0005058!6.13e-11!23;UBERON:0003351!6.13e-11!23;UBERON:0009113!6.13e-11!23;UBERON:0003295!6.13e-11!23;UBERON:0009722!6.13e-11!23;UBERON:0005562!6.13e-11!23;UBERON:0007690!6.13e-11!23;UBERON:0001004!8.68e-11!42;UBERON:0006562!2.77e-10!24;UBERON:0001557!2.77e-10!24;UBERON:0001042!2.77e-10!24;UBERON:0008814!2.77e-10!24;UBERON:0009145!2.77e-10!24;UBERON:0000065!6.54e-10!41;UBERON:0001007!1.05e-08!128;UBERON:0001555!1.05e-08!128;UBERON:0007026!1.05e-08!128;UBERON:0000072!1.27e-08!27;UBERON:0005057!1.39e-08!51;UBERON:0004119!2.21e-08!130;UBERON:0000925!2.21e-08!130;UBERON:0006595!2.21e-08!130;UBERON:0004921!1.41e-07!126;UBERON:0004185!1.41e-07!126;UBERON:0001041!1.58e-07!92;UBERON:0000077!2.99e-07!97;UBERON:0003081!4.73e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.54e-16,48;UBERON:0002405,8.54e-16,48;UBERON:0002465,2.28e-15,3;UBERON:0001962,2.38e-10,2;UBERON:0001961,2.38e-10,2;UBERON:0001744,2.38e-10,2;UBERON:0002390,7.69e-10,45;UBERON:0003061,7.69e-10,45;UBERON:0002106,3.46e-08,6;UBERON:0004457,3.46e-08,6;UBERON:0000042,3.46e-08,6;UBERON:0004854,3.46e-08,6;UBERON:0009034,3.46e-08,6;UBERON:0002095,3.46e-08,6;UBERON:0004782,3.46e-08,6;UBERON:0003281,3.46e-08,6;UBERON:0009664,3.46e-08,6;UBERON:0002296,3.46e-08,6;UBERON:0005602,3.46e-08,6;UBERON:0001179,3.46e-08,6;UBERON:0006293,3.46e-08,6;UBERON:0002371,8.74e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0.234064526321993,5.47897498321616,2.55270908785077,0,0,1.33243904726265,2.42970320867791,0,11.1989068702174,7.81552271552711,8.06340338416257,0,0,0,2.07990149631429,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,29.5189187357776,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,0,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0,0,0,0,1.79763881730844,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29699730473343,0,0.370389054739423,0.941842285023455,4.23752105935178,3.43167259809784,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,3.10669656543463,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.302899349844443,0.228620419965,0.403304740547362,0.584747284438515,0.481059208201647,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0.234064526321993,5.47897498321616,2.55270908785077,0,0,1.33243904726265,2.42970320867791,0,11.1989068702174,7.81552271552711,8.06340338416257,0,0,0,2.07990149631429,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,29.5189187357776,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,0,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0,0,0,0,1.79763881730844,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29699730473343,0,0.370389054739423,0.941842285023455,4.23752105935178,3.43167259809784,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,3.10669656543463,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.302899349844443,0.228620419965,0.403304740547362,0.584747284438515,0.481059208201647,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Lta | |||
}} | }} |
Latest revision as of 09:56, 26 September 2015
Short description: | p2@Lta |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lta_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -132bp_to_ENSMUST00000025266, NM_010735, uc008cgu.2_5end |
EntrezGene: | Lta |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.60e-21 | 6 |
megakaryocyte | 5.60e-21 | 6 |
megakaryocyte-erythroid progenitor cell | 5.84e-14 | 9 |
hematopoietic lineage restricted progenitor cell | 5.72e-12 | 25 |
myeloid lineage restricted progenitor cell | 1.27e-09 | 13 |
hematopoietic cell | 3.88e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.88e-09 | 32 |
hematopoietic stem cell | 3.88e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.88e-09 | 32 |
myeloid cell | 8.74e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.22e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.22e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.54e-16 | 48 |
immune system | 8.54e-16 | 48 |
lymphoid system | 2.28e-15 | 3 |
gut-associated lymphoid tissue | 2.38e-10 | 2 |
mucosa-associated lymphoid tissue | 2.38e-10 | 2 |
lymphoid tissue | 2.38e-10 | 2 |
hematopoietic system | 7.69e-10 | 45 |
blood island | 7.69e-10 | 45 |
spleen | 3.46e-08 | 6 |
cavity lining | 3.46e-08 | 6 |
serous membrane | 3.46e-08 | 6 |
gastrointestinal system mesentery | 3.46e-08 | 6 |
stomach region | 3.46e-08 | 6 |
mesentery | 3.46e-08 | 6 |
gastrointestinal system serosa | 3.46e-08 | 6 |
mesentery of stomach | 3.46e-08 | 6 |
gut mesentery | 3.46e-08 | 6 |
dorsal mesentery | 3.46e-08 | 6 |
dorsal mesogastrium | 3.46e-08 | 6 |
peritoneal cavity | 3.46e-08 | 6 |
spleen primordium | 3.46e-08 | 6 |
bone marrow | 8.74e-08 | 16 |