FFCP PHASE1:Mm9::chr17:35834925..35834946,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12305 | |EntrezGene=12305 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=B0V2H9 | |UniProt=B0V2H9 | ||
|association_with_transcript=-9bp_to_ENSMUST00000146472_5end | |association_with_transcript=-9bp_to_ENSMUST00000146472_5end | ||
|cluster_id=chr17:35834925..35834946,- | |||
|description=CAGE_peak_12_at_Ddr1_5end | |description=CAGE_peak_12_at_Ddr1_5end | ||
|id=chr17:35834925..35834946,- | |id=chr17:35834925..35834946,- | ||
|ontology_enrichment_celltype=CL:0000055!5.86e-11!50;CL:0002321!1.12e-10!70;CL:0000220!1.12e-10!70;CL:0000221!2.37e-09!44;CL:0000133!2.37e-09!44;CL:0002319!2.81e-09!43;CL:0000107!1.78e-07!9;CL:0000333!3.45e-07!10;CL:0000095!3.45e-07!10;CL:0000243!3.45e-07!10;CL:0000123!3.45e-07!10;CL:0000125!3.45e-07!10;CL:0000030!3.45e-07!10;CL:0000339!3.45e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.07e-17,70;CL:0002319,1.18e-14,43;CL:0000221,3.60e-14,44;CL:0000133,3.60e-14,44;CL:0000107,6.62e-13,9;CL:0000393,9.15e-10,39;CL:0000211,9.15e-10,39;CL:0000333,1.21e-08,10;CL:0000095,1.21e-08,10;CL:0000243,1.21e-08,10;CL:0000123,1.21e-08,10;CL:0000125,1.21e-08,10;CL:0000030,1.21e-08,10;CL:0000339,1.21e-08,10;CL:0000540,3.04e-08,33;CL:0000047,3.04e-08,33;CL:0000031,3.04e-08,33;CL:0000404,3.04e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.08e-17!75;UBERON:0001016!6.08e-17!75;UBERON:0004121!7.20e-17!102;UBERON:0000924!7.20e-17!102;UBERON:0006601!7.20e-17!102;UBERON:0001017!1.01e-15!73;UBERON:0005743!1.01e-15!73;UBERON:0000010!9.26e-09!11;UBERON:0000033!1.12e-08!63;UBERON:0000955!2.12e-08!50;UBERON:0006238!2.12e-08!50;UBERON:0001049!2.66e-08!52;UBERON:0005068!2.66e-08!52;UBERON:0006241!2.66e-08!52;UBERON:0007135!2.66e-08!52;UBERON:0002616!5.02e-08!49;UBERON:0002346!9.50e-08!71;UBERON:0003075!9.50e-08!71;UBERON:0007284!9.50e-08!71;UBERON:0002410!1.78e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.26e-21,75;UBERON:0001017,3.27e-19,73;UBERON:0004121,7.11e-19,95;UBERON:0000924,7.11e-19,95;UBERON:0006601,7.11e-19,95;UBERON:0000010,2.32e-15,11;UBERON:0002410,6.62e-13,9;UBERON:0000073,1.68e-08,54;UBERON:0010371,1.00e-07,73;UBERON:0001049,2.54e-07,52;UBERON:0005068,2.54e-07,52;UBERON:0006241,2.54e-07,52;UBERON:0007135,2.54e-07,52;UBERON:0002346,3.16e-07,64;UBERON:0003075,3.16e-07,64;UBERON:0007284,3.16e-07,64 | |||
|phase1_expression=0,1.04692622291808,2.27499619694768,0,0,1.17515490338323,2.56973904655078,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.59992422793407,2.06468352960453,4.59385571292016,2.15380998079537,1.50829862880122,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0.782391344348039,0.436050312760893,2.19686182734472,1.55543919259427,1.1198913730029,1.43752564364972,0,0,0,2.82985379639542,1.43266719969378,3.09403255366465,0,0,0,1.35537812827653,2.66788438833342,0,0,0,4.49400165777607,2.68952813725088,0.207379224616955,0,0,1.42825492201902,1.54607978666129,0,0,0,1.10115880999389,1.65993539510744,2.91852413186863,0,0,0,3.62937898701795,0.56276261003168,3.97275444219706,0.294628585473668,0.711858403995515,0,3.02904773332736,1.36028808192214,2.02905142091174,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,1.5154372870785,1.26679932737549,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,2.93225389538837,0,0,0,0,4.34392854273986,4.57500602818627,0,1.39059456153821,1.27857728665165,5.194701113989,4.54275536589721,0.101839363850316,0,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,2.52347938276953,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,1.10374698521893,8.50918126935297,3.6335622843583,0.327869890753351,0.252470927204373,2.2085575359138,1.95219372148319,1.29254038639679,2.62865677747807,2.67358408898873,3.39691836946599,2.42886421004937,2.63030272120181,1.58115111178609,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0,0,0.565815239267694,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,1.97863503529776,0,0.120625849856312,0.954978752025092,1.31312719796049,0,9.45669040253599,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,1.86401793926078,0,0.149516546043979,0.66183396182839,0.583353565032143,0.516639293910924,0.506868376472335,0.234714477291508,0.39061315453185,0.734015410979976,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0.221985953374065,0.358855426437903,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.343706364687375,1.37016503954128,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,1.03552062350364,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.04692622291808,2.27499619694768,0,0,1.17515490338323,2.56973904655078,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.59992422793407,2.06468352960453,4.59385571292016,2.15380998079537,1.50829862880122,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0.782391344348039,0.436050312760893,2.19686182734472,1.55543919259427,1.1198913730029,1.43752564364972,0,0,0,2.82985379639542,1.43266719969378,3.09403255366465,0,0,0,1.35537812827653,2.66788438833342,0,0,0,4.49400165777607,2.68952813725088,0.207379224616955,0,0,1.42825492201902,1.54607978666129,0,0,0,1.10115880999389,1.65993539510744,2.91852413186863,0,0,0,3.62937898701795,0.56276261003168,3.97275444219706,0.294628585473668,0.711858403995515,0,3.02904773332736,1.36028808192214,2.02905142091174,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,1.5154372870785,1.26679932737549,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,2.93225389538837,0,0,0,0,4.34392854273986,4.57500602818627,0,1.39059456153821,1.27857728665165,5.194701113989,4.54275536589721,0.101839363850316,0,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,2.52347938276953,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,1.10374698521893,8.50918126935297,3.6335622843583,0.327869890753351,0.252470927204373,2.2085575359138,1.95219372148319,1.29254038639679,2.62865677747807,2.67358408898873,3.39691836946599,2.42886421004937,2.63030272120181,1.58115111178609,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0,0,0.565815239267694,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,1.97863503529776,0,0.120625849856312,0.954978752025092,1.31312719796049,0,9.45669040253599,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,1.86401793926078,0,0.149516546043979,0.66183396182839,0.583353565032143,0.516639293910924,0.506868376472335,0.234714477291508,0.39061315453185,0.734015410979976,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0.221985953374065,0.358855426437903,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.343706364687375,1.37016503954128,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,1.03552062350364,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p12@Ddr1 | |short_description=p12@Ddr1 | ||
}} | }} |
Latest revision as of 10:30, 26 September 2015
Short description: | p12@Ddr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Ddr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -9bp_to_ENSMUST00000146472_5end |
EntrezGene: | Ddr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.07e-17 | 70 |
neural cell | 1.18e-14 | 43 |
ectodermal cell | 3.60e-14 | 44 |
neurectodermal cell | 3.60e-14 | 44 |
autonomic neuron | 6.62e-13 | 9 |
electrically responsive cell | 9.15e-10 | 39 |
electrically active cell | 9.15e-10 | 39 |
migratory neural crest cell | 1.21e-08 | 10 |
neuron associated cell | 1.21e-08 | 10 |
glial cell (sensu Vertebrata) | 1.21e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.21e-08 | 10 |
glial cell | 1.21e-08 | 10 |
glioblast | 1.21e-08 | 10 |
glioblast (sensu Vertebrata) | 1.21e-08 | 10 |
neuron | 3.04e-08 | 33 |
neuronal stem cell | 3.04e-08 | 33 |
neuroblast | 3.04e-08 | 33 |
electrically signaling cell | 3.04e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.26e-21 | 75 |
central nervous system | 3.27e-19 | 73 |
ectoderm-derived structure | 7.11e-19 | 95 |
ectoderm | 7.11e-19 | 95 |
presumptive ectoderm | 7.11e-19 | 95 |
peripheral nervous system | 2.32e-15 | 11 |
autonomic nervous system | 6.62e-13 | 9 |
regional part of nervous system | 1.68e-08 | 54 |
ecto-epithelium | 1.00e-07 | 73 |
neural tube | 2.54e-07 | 52 |
neural rod | 2.54e-07 | 52 |
future spinal cord | 2.54e-07 | 52 |
neural keel | 2.54e-07 | 52 |
neurectoderm | 3.16e-07 | 64 |
neural plate | 3.16e-07 | 64 |
presumptive neural plate | 3.16e-07 | 64 |