FFCP PHASE1:Mm9::chr17:35839161..35839173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12305 | |EntrezGene=12305 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=427 | |MCL_coexpression_id=427 | ||
|TSSclassifier=NA | |||
|UniProt=F7BZR8 | |UniProt=F7BZR8 | ||
|association_with_transcript=88bp_to_ENSMUST00000135078_5end | |association_with_transcript=88bp_to_ENSMUST00000135078_5end | ||
|cluster_id=chr17:35839161..35839173,- | |||
|description=CAGE_peak_16_at_Ddr1_5end | |description=CAGE_peak_16_at_Ddr1_5end | ||
|id=chr17:35839161..35839173,- | |id=chr17:35839161..35839173,- | ||
|ontology_enrichment_celltype=CL:0002453!4.38e-09!8;CL:0000128!3.27e-07!6;CL:0000126!3.27e-07!6;CL:0000127!3.27e-07!6 | |ontology_enrichment_celltype=CL:0002453!4.38e-09!8;CL:0000128!3.27e-07!6;CL:0000126!3.27e-07!6;CL:0000127!3.27e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.34e-35,8;CL:0000333,7.12e-28,10;CL:0000095,7.12e-28,10;CL:0000243,7.12e-28,10;CL:0000123,7.12e-28,10;CL:0000125,7.12e-28,10;CL:0000030,7.12e-28,10;CL:0000339,7.12e-28,10;CL:0000128,9.95e-27,6;CL:0000126,9.95e-27,6;CL:0000127,9.95e-27,6;CL:0002605,3.32e-10,2;CL:0002604,3.32e-10,2;CL:0002603,4.99e-10,2;CL:0000878,6.10e-10,2;CL:0000129,6.10e-10,2;CL:0000708,5.74e-09,2;CL:0000219,4.96e-08,54;CL:0002494,8.85e-07,3;CL:0000737,8.85e-07,3;CL:0000746,8.85e-07,3;CL:0000513,8.85e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.06e-09!18;UBERON:0000948!7.06e-09!18;UBERON:0005498!7.06e-09!18;UBERON:0004140!7.06e-09!18;UBERON:0009881!7.06e-09!18;UBERON:0004141!7.06e-09!18;UBERON:0003084!7.06e-09!18;UBERON:0007005!7.06e-09!18;UBERON:0004139!7.06e-09!18;UBERON:0004291!7.06e-09!18;UBERON:0004872!1.30e-07!33;UBERON:0004535!6.97e-07!23;UBERON:0001009!6.97e-07!23 | |ontology_enrichment_uberon=UBERON:0007100!7.06e-09!18;UBERON:0000948!7.06e-09!18;UBERON:0005498!7.06e-09!18;UBERON:0004140!7.06e-09!18;UBERON:0009881!7.06e-09!18;UBERON:0004141!7.06e-09!18;UBERON:0003084!7.06e-09!18;UBERON:0007005!7.06e-09!18;UBERON:0004139!7.06e-09!18;UBERON:0004291!7.06e-09!18;UBERON:0004872!1.30e-07!33;UBERON:0004535!6.97e-07!23;UBERON:0001009!6.97e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.45e-14,18;UBERON:0000948,5.45e-14,18;UBERON:0005498,5.45e-14,18;UBERON:0004140,5.45e-14,18;UBERON:0009881,5.45e-14,18;UBERON:0004141,5.45e-14,18;UBERON:0003084,5.45e-14,18;UBERON:0007005,5.45e-14,18;UBERON:0004139,5.45e-14,18;UBERON:0004291,5.45e-14,18;UBERON:0004535,1.00e-10,23;UBERON:0001009,1.00e-10,23;UBERON:0003210,5.74e-09,2;UBERON:0004872,3.70e-07,33 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,5.45062890951116,5.4921545683618,8.55491555926847,1.95980990275508,7.18762821824858,0,0,0,0,3.72493471920384,2.57836046138721,0,0,0,1.0165335962074,1.77858959222228,0,0.988866362566974,0,2.39680088414724,7.68436610643109,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0,1.41335829804136,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,3.10688658803253,1.40715635988658,1.80062061461015,2.3674473558521,1.37734962223183,1.3884040159864,0.232533944750408,0.536546802799238,0.817357396570186,0.493679549740441,0.32833492815819,0.243206428637567,0,0,0.134206418760372,0,0,0,0,0,0,0,0.403367049246685,0,0.570676878337677,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0.655739781506702,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0.35613120733451,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0.885905678642318,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0.170870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0.66183396182839,0.777804753376191,0.516639293910924,0.168956125490778,0.821500670520278,0.39061315453185,0.629156066554265,0,0,0,0.608175645870493,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.355905054372522,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0.644613162144895,1.14772999241306,0.441182838239031,0.231867835620421 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,5.45062890951116,5.4921545683618,8.55491555926847,1.95980990275508,7.18762821824858,0,0,0,0,3.72493471920384,2.57836046138721,0,0,0,1.0165335962074,1.77858959222228,0,0.988866362566974,0,2.39680088414724,7.68436610643109,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0,1.41335829804136,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,3.10688658803253,1.40715635988658,1.80062061461015,2.3674473558521,1.37734962223183,1.3884040159864,0.232533944750408,0.536546802799238,0.817357396570186,0.493679549740441,0.32833492815819,0.243206428637567,0,0,0.134206418760372,0,0,0,0,0,0,0,0.403367049246685,0,0.570676878337677,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0.655739781506702,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0.35613120733451,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0.885905678642318,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0.170870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0.66183396182839,0.777804753376191,0.516639293910924,0.168956125490778,0.821500670520278,0.39061315453185,0.629156066554265,0,0,0,0.608175645870493,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.355905054372522,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0.644613162144895,1.14772999241306,0.441182838239031,0.231867835620421 | ||
|short_description=p16@Ddr1 | |short_description=p16@Ddr1 | ||
}} | }} |
Latest revision as of 10:31, 26 September 2015
Short description: | p16@Ddr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Ddr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:427 |
Association with transcript: | 88bp_to_ENSMUST00000135078_5end |
EntrezGene: | Ddr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.34e-35 | 8 |
migratory neural crest cell | 7.12e-28 | 10 |
neuron associated cell | 7.12e-28 | 10 |
glial cell (sensu Vertebrata) | 7.12e-28 | 10 |
neuron associated cell (sensu Vertebrata) | 7.12e-28 | 10 |
glial cell | 7.12e-28 | 10 |
glioblast | 7.12e-28 | 10 |
glioblast (sensu Vertebrata) | 7.12e-28 | 10 |
oligodendrocyte | 9.95e-27 | 6 |
macroglial cell | 9.95e-27 | 6 |
astrocyte | 9.95e-27 | 6 |
astrocyte of the cerebral cortex | 3.32e-10 | 2 |
astrocyte of the hippocampus | 3.32e-10 | 2 |
astrocyte of the cerebellum | 4.99e-10 | 2 |
central nervous system macrophage | 6.10e-10 | 2 |
microglial cell | 6.10e-10 | 2 |
leptomeningeal cell | 5.74e-09 | 2 |
motile cell | 4.96e-08 | 54 |
cardiocyte | 8.85e-07 | 3 |
striated muscle cell | 8.85e-07 | 3 |
cardiac muscle cell | 8.85e-07 | 3 |
cardiac muscle myoblast | 8.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.45e-14 | 18 |
heart | 5.45e-14 | 18 |
primitive heart tube | 5.45e-14 | 18 |
primary heart field | 5.45e-14 | 18 |
anterior lateral plate mesoderm | 5.45e-14 | 18 |
heart tube | 5.45e-14 | 18 |
heart primordium | 5.45e-14 | 18 |
cardiac mesoderm | 5.45e-14 | 18 |
cardiogenic plate | 5.45e-14 | 18 |
heart rudiment | 5.45e-14 | 18 |
cardiovascular system | 1.00e-10 | 23 |
circulatory system | 1.00e-10 | 23 |
blood-cerebrospinal fluid barrier | 5.74e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 3.70e-07 | 33 |