FFCP PHASE1:Mm9::chr6:108778556..108778559,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192193 | |EntrezGene=192193 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q925U4,Q6ZQG3 | |UniProt=Q925U4,Q6ZQG3 | ||
|association_with_transcript=-75bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end | |association_with_transcript=-75bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end | ||
|cluster_id=chr6:108778556..108778559,+ | |||
|description=CAGE_peak_9_at_Edem1_5end | |description=CAGE_peak_9_at_Edem1_5end | ||
|id=chr6:108778556..108778559,+ | |id=chr6:108778556..108778559,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!5.60e-13!41;UBERON:0001004!2.03e-12!42;UBERON:0002370!2.73e-12!23;UBERON:0000974!2.73e-12!23;UBERON:0004807!2.73e-12!23;UBERON:0005058!2.73e-12!23;UBERON:0003351!2.73e-12!23;UBERON:0009113!2.73e-12!23;UBERON:0003295!2.73e-12!23;UBERON:0009722!2.73e-12!23;UBERON:0005562!2.73e-12!23;UBERON:0007690!2.73e-12!23;UBERON:0000072!8.13e-12!27;UBERON:0006562!1.77e-11!24;UBERON:0003408!1.77e-11!24;UBERON:0001557!1.77e-11!24;UBERON:0001042!1.77e-11!24;UBERON:0008814!1.77e-11!24;UBERON:0009145!1.77e-11!24;UBERON:0000063!1.07e-10!35;UBERON:0004177!2.42e-09!29;UBERON:0000077!2.78e-09!97;UBERON:0005911!2.90e-09!69;UBERON:0001041!3.94e-09!92;UBERON:0004119!2.36e-08!130;UBERON:0000925!2.36e-08!130;UBERON:0006595!2.36e-08!130;UBERON:0001007!4.40e-08!128;UBERON:0001555!4.40e-08!128;UBERON:0007026!4.40e-08!128;UBERON:0004921!6.39e-08!126;UBERON:0004185!6.39e-08!126;UBERON:0003929!2.49e-07!55;UBERON:0000949!2.80e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.19e-12,23;UBERON:0000974,4.19e-12,23;UBERON:0004807,4.19e-12,23;UBERON:0005058,4.19e-12,23;UBERON:0003351,4.19e-12,23;UBERON:0009113,4.19e-12,23;UBERON:0003295,4.19e-12,23;UBERON:0009722,4.19e-12,23;UBERON:0005562,4.19e-12,23;UBERON:0007690,4.19e-12,23;UBERON:0006562,1.31e-11,24;UBERON:0003408,1.31e-11,24;UBERON:0001557,1.31e-11,24;UBERON:0001042,1.31e-11,24;UBERON:0008814,1.31e-11,24;UBERON:0009145,1.31e-11,24;UBERON:0000072,2.41e-10,27;UBERON:0004177,1.21e-09,29;UBERON:0005057,1.21e-09,29;UBERON:0000077,5.08e-08,35;UBERON:0007811,8.41e-08,36;UBERON:0000065,7.26e-07,41 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0.159544317990673,0.171200729931206,0.34968160967599,0,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0.457500602818626,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0,0,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0.592905254174298,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.358794827043824,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0.54390568381871,0,0,0,0.468846746368813,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,1.32745138339963,0,0.604647113929502,0.754420319023592,0.590603785761546,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0.406638934253697,0,0,0,0,0,0.26175594198403,0,0,0,0.299033092087958,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.389762468933385,0.537080087002444,0.198681354781265,1.56254084375959,1.18151621739662,1.00966449948148,0.914481679859998,1.00826185136841,0.779663045918019,1.44317762460494,0.467507608726276,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0.159544317990673,0.171200729931206,0.34968160967599,0,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0.457500602818626,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0,0,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0.592905254174298,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.358794827043824,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0.54390568381871,0,0,0,0.468846746368813,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,1.32745138339963,0,0.604647113929502,0.754420319023592,0.590603785761546,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0.406638934253697,0,0,0,0,0,0.26175594198403,0,0,0,0.299033092087958,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.389762468933385,0.537080087002444,0.198681354781265,1.56254084375959,1.18151621739662,1.00966449948148,0.914481679859998,1.00826185136841,0.779663045918019,1.44317762460494,0.467507608726276,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p9@Edem1 | |short_description=p9@Edem1 | ||
}} | }} |
Latest revision as of 10:52, 26 September 2015
Short description: | p9@Edem1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Edem1_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_ENSMUST00000089162, ENSMUST00000169217, NM_138677, uc009ddq.1, uc009ddr.1_5end |
EntrezGene: | Edem1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.19e-12 | 23 |
neck | 4.19e-12 | 23 |
respiratory system epithelium | 4.19e-12 | 23 |
hemolymphoid system gland | 4.19e-12 | 23 |
pharyngeal epithelium | 4.19e-12 | 23 |
thymic region | 4.19e-12 | 23 |
pharyngeal gland | 4.19e-12 | 23 |
entire pharyngeal arch endoderm | 4.19e-12 | 23 |
thymus primordium | 4.19e-12 | 23 |
early pharyngeal endoderm | 4.19e-12 | 23 |
pharynx | 1.31e-11 | 24 |
gland of gut | 1.31e-11 | 24 |
upper respiratory tract | 1.31e-11 | 24 |
chordate pharynx | 1.31e-11 | 24 |
pharyngeal arch system | 1.31e-11 | 24 |
pharyngeal region of foregut | 1.31e-11 | 24 |
segment of respiratory tract | 2.41e-10 | 27 |
hemopoietic organ | 1.21e-09 | 29 |
immune organ | 1.21e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 5.08e-08 | 35 |
craniocervical region | 8.41e-08 | 36 |
respiratory tract | 7.26e-07 | 41 |