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FFCP PHASE1:Mm9::chr6:108778599..108778610,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:108778599..108778610,+
|DHSsupport=NA
|short_description=p4@Edem1
|DPIdataset=NA
|description=CAGE_peak_4_at_Edem1_5end
|association_with_transcript=-24bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end
|EntrezGene=192193
|EntrezGene=192193
|HGNC=
|HGNC=
|MCL_coexpression_id=1583
|TSSclassifier=NA
|UniProt=Q925U4,Q6ZQG3
|UniProt=Q925U4,Q6ZQG3
|association_with_transcript=-24bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end
|cluster_id=chr6:108778599..108778610,+
|description=CAGE_peak_4_at_Edem1_5end
|id=chr6:108778599..108778610,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.36e-11!130;UBERON:0000925!1.36e-11!130;UBERON:0006595!1.36e-11!130;UBERON:0000077!1.49e-11!97;UBERON:0001007!1.05e-10!128;UBERON:0001555!1.05e-10!128;UBERON:0007026!1.05e-10!128;UBERON:0004921!1.62e-10!126;UBERON:0004185!1.62e-10!126;UBERON:0001041!5.27e-10!92;UBERON:0003929!9.49e-09!55;UBERON:0000949!1.30e-08!72;UBERON:0003104!2.46e-08!131;UBERON:0009142!2.46e-08!131;UBERON:0005057!8.66e-08!51;UBERON:0000490!1.70e-07!66;UBERON:0003408!4.43e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000949,9.03e-23,72;UBERON:0003408,6.20e-19,24;UBERON:0002370,3.22e-17,23;UBERON:0000974,3.22e-17,23;UBERON:0004807,3.22e-17,23;UBERON:0005058,3.22e-17,23;UBERON:0003351,3.22e-17,23;UBERON:0009113,3.22e-17,23;UBERON:0003295,3.22e-17,23;UBERON:0009722,3.22e-17,23;UBERON:0005562,3.22e-17,23;UBERON:0007690,3.22e-17,23;UBERON:0001264,1.95e-16,12;UBERON:0006562,2.23e-16,24;UBERON:0001557,2.23e-16,24;UBERON:0001042,2.23e-16,24;UBERON:0008814,2.23e-16,24;UBERON:0009145,2.23e-16,24;UBERON:0000077,8.79e-16,35;UBERON:0003929,2.61e-14,55;UBERON:0000072,3.15e-14,27;UBERON:0004177,4.83e-13,29;UBERON:0005057,4.83e-13,29;UBERON:0002530,9.70e-13,65;UBERON:0000490,1.53e-12,66;UBERON:0007811,1.50e-11,36;UBERON:0002368,2.24e-11,60;UBERON:0000153,1.46e-10,43;UBERON:0005911,1.77e-10,69;UBERON:0002075,9.44e-10,19;UBERON:0001004,1.88e-09,42;UBERON:0002390,1.40e-08,45;UBERON:0003061,1.40e-08,45;UBERON:0001041,1.94e-08,80;UBERON:0000065,2.22e-08,41;UBERON:0002193,7.44e-08,48;UBERON:0002405,7.44e-08,48
|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0.985521055061667,0.234064526321993,0.171217968225505,0.319088635981346,1.54080656938085,0.34968160967599,0.333109761815663,0.202475267389826,0,0.157731082679119,1.09691546884591,0,0.17008658030214,0.397163804803541,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0,0.570070258369122,0,0,0,0,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0,2.09409497589519,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,1.34437519656986,0,0.573066879877513,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0,0,0.244981598429908,0.191690942036473,0.919218786610021,0,0.255374676170375,0,0,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0.075726193333184,0.529000920747499,0,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,0.896053774194671,0.140444420131752,0,0.259786004602869,0.70667914902068,0,0,0,0,0.649473123033642,0.253359865475099,0,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0.376999773989026,0.494389935468748,0.289198713839823,0.884610551949874,0.808834249737046,0.441683036920787,0,0,0,0,0.255457055208591,0.599075622529601,0,0.635351135365324,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.486723789203273,0.203678727700633,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.136072998302656,0,0.374806898238915,0,0.431135985865684,1.13463648100692,0,0,0,0,0.411564272815887,0,0,0.772043721344145,0.568326998791185,0.207125772535502,0,0.720248245844059,0.710234206755631,0.196764231747404,0,0,0.268273401399619,0,0,0.492502392237286,0,0.146199987425332,0.878200461164203,0.134206418760372,0,0.205809224758569,0.991256348951394,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,0,0.432276099749388,0.398282546508734,0.569003702859245,0.799739588268102,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.667380422864376,0.589676985339609,0,0.202860121388503,0.72353147925725,0.25462585178142,0.863088412352432,0,1.09824565275233,2.87536413054709,0,0.312037673114561,1.51547326768267,1.25578189465339,0.964887042726734,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0,0.491589944147214,0.345369963731791,0,0,0,0.983528546038072,0,0.160550589987792,0.234423373184406,0.163934945376675,0.252470927204373,0,0.390438744296638,0,0.477937595905104,0,0.283076530788832,0,0,0,0,0.709700426041343,0.534196811001766,0.325773918707152,0.164970122972535,5.30980553359851,0,1.209294227859,2.26326095707078,2.65771703592696,2.76691633149535,0.516856586336442,2.18120237686503,2.85197902707777,3.79244109522979,0,3.09406629744561,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,1.40803024838226,1.27099242518292,1.10264199027481,0.16488625294148,0.322928853391811,0.361877549568935,0.238744688006273,0,0,0.370850604021019,0.170870880797853,0.412773735926445,0,0,0.410082683163076,0.228778173206523,0.169978429993855,0.559805809294632,0.967399816630967,0.954670618015114,0.474503990371703,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0,0.129614973291793,1.24267862617385,0,0.299033092087958,0.330916980914195,0,0,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0.483168241652012,0,2.52808896502543,0.608175645870493,0.308132871494482,1.03936658382236,3.40150721768215,1.39076948346885,3.846254384639,3.69223817936443,4.13962444787405,3.58171991278499,3.42809029465258,3.70339946811059,4.71438024037614,4.09069157635491,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.729320151204882,0,0,0.222246727801615,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0,0.365855945745545,0.526139422875686,0.271608227691724,0,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0,0.644613162144895,0.57386499620653,0.220591419119515,0.463735671240843
|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0.985521055061667,0.234064526321993,0.171217968225505,0.319088635981346,1.54080656938085,0.34968160967599,0.333109761815663,0.202475267389826,0,0.157731082679119,1.09691546884591,0,0.17008658030214,0.397163804803541,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0,0.570070258369122,0,0,0,0,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0,2.09409497589519,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,1.34437519656986,0,0.573066879877513,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0,0,0.244981598429908,0.191690942036473,0.919218786610021,0,0.255374676170375,0,0,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0.075726193333184,0.529000920747499,0,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,0.896053774194671,0.140444420131752,0,0.259786004602869,0.70667914902068,0,0,0,0,0.649473123033642,0.253359865475099,0,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0.376999773989026,0.494389935468748,0.289198713839823,0.884610551949874,0.808834249737046,0.441683036920787,0,0,0,0,0.255457055208591,0.599075622529601,0,0.635351135365324,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.486723789203273,0.203678727700633,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.136072998302656,0,0.374806898238915,0,0.431135985865684,1.13463648100692,0,0,0,0,0.411564272815887,0,0,0.772043721344145,0.568326998791185,0.207125772535502,0,0.720248245844059,0.710234206755631,0.196764231747404,0,0,0.268273401399619,0,0,0.492502392237286,0,0.146199987425332,0.878200461164203,0.134206418760372,0,0.205809224758569,0.991256348951394,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,0,0.432276099749388,0.398282546508734,0.569003702859245,0.799739588268102,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.667380422864376,0.589676985339609,0,0.202860121388503,0.72353147925725,0.25462585178142,0.863088412352432,0,1.09824565275233,2.87536413054709,0,0.312037673114561,1.51547326768267,1.25578189465339,0.964887042726734,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0,0.491589944147214,0.345369963731791,0,0,0,0.983528546038072,0,0.160550589987792,0.234423373184406,0.163934945376675,0.252470927204373,0,0.390438744296638,0,0.477937595905104,0,0.283076530788832,0,0,0,0,0.709700426041343,0.534196811001766,0.325773918707152,0.164970122972535,5.30980553359851,0,1.209294227859,2.26326095707078,2.65771703592696,2.76691633149535,0.516856586336442,2.18120237686503,2.85197902707777,3.79244109522979,0,3.09406629744561,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,1.40803024838226,1.27099242518292,1.10264199027481,0.16488625294148,0.322928853391811,0.361877549568935,0.238744688006273,0,0,0.370850604021019,0.170870880797853,0.412773735926445,0,0,0.410082683163076,0.228778173206523,0.169978429993855,0.559805809294632,0.967399816630967,0.954670618015114,0.474503990371703,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0,0.129614973291793,1.24267862617385,0,0.299033092087958,0.330916980914195,0,0,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0.483168241652012,0,2.52808896502543,0.608175645870493,0.308132871494482,1.03936658382236,3.40150721768215,1.39076948346885,3.846254384639,3.69223817936443,4.13962444787405,3.58171991278499,3.42809029465258,3.70339946811059,4.71438024037614,4.09069157635491,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.729320151204882,0,0,0.222246727801615,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0,0.365855945745545,0.526139422875686,0.271608227691724,0,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0,0.644613162144895,0.57386499620653,0.220591419119515,0.463735671240843
|short_description=p4@Edem1
}}
}}

Latest revision as of 10:53, 26 September 2015

Short description:p4@Edem1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Edem1_5end
Coexpression cluster:MCL_coexpression_mm9:1583
Association with transcript: -24bp_to_ENSMUST00000089162, ENSMUST00000169217, NM_138677, uc009ddq.1, uc009ddr.1_5end
EntrezGene:Edem1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Edem1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C44.14
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endocrine system9.03e-2372
gland of gut6.20e-1924
thymus3.22e-1723
neck3.22e-1723
respiratory system epithelium3.22e-1723
hemolymphoid system gland3.22e-1723
pharyngeal epithelium3.22e-1723
thymic region3.22e-1723
pharyngeal gland3.22e-1723
entire pharyngeal arch endoderm3.22e-1723
thymus primordium3.22e-1723
early pharyngeal endoderm3.22e-1723
pancreas1.95e-1612
pharynx2.23e-1624
upper respiratory tract2.23e-1624
chordate pharynx2.23e-1624
pharyngeal arch system2.23e-1624
pharyngeal region of foregut2.23e-1624
mixed endoderm/mesoderm-derived structure8.79e-1635
gut epithelium2.61e-1455
segment of respiratory tract3.15e-1427
hemopoietic organ4.83e-1329
immune organ4.83e-1329
gland9.70e-1365
unilaminar epithelium1.53e-1266
craniocervical region1.50e-1136
endocrine gland2.24e-1160
anterior region of body1.46e-1043
endo-epithelium1.77e-1069
viscus9.44e-1019
respiratory system1.88e-0942
hematopoietic system1.40e-0845
blood island1.40e-0845
foregut1.94e-0880
respiratory tract2.22e-0841
hemolymphoid system7.44e-0848
immune system7.44e-0848
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