FFCP PHASE1:Mm9::chr10:80754245..80754271,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:80754245..80754271,- to FFCP PHASE1:Mm9::chr10:80754245..80754271,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27375 | |EntrezGene=27375 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_uc007ghb.1_5end | |||
|cluster_id=chr10:80754245..80754271,- | |||
|description=CAGE_peak_4_at_Tjp3_5end | |||
|id=chr10:80754245..80754271,- | |||
|ontology_enrichment_celltype=CL:0002563!2.49e-12!9;CL:0002251!2.49e-12!9;CL:0002076!5.03e-11!15;CL:0000066!1.89e-10!25;CL:0000239!9.49e-09!6;CL:0000677!9.49e-09!6;CL:0000212!9.49e-09!6;CL:0000584!9.49e-09!6;CL:0000223!1.24e-08!20;CL:0000075!2.66e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.76e-24,9;CL:0002251,2.76e-24,9;CL:0002076,7.06e-17,15;CL:0000239,1.01e-16,6;CL:0000677,1.01e-16,6;CL:0000584,1.01e-16,6;CL:0000066,1.54e-16,25;CL:0000075,3.12e-14,7;CL:0000223,3.68e-12,20;CL:0000682,1.25e-09,3;CL:0002250,3.92e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.75e-21!43;UBERON:0005409!3.48e-20!59;UBERON:0000344!1.46e-19!15;UBERON:0001242!1.87e-17!13;UBERON:0000060!1.87e-17!13;UBERON:0001262!1.87e-17!13;UBERON:0004786!1.87e-17!13;UBERON:0003350!2.49e-12!9;UBERON:0004808!2.49e-12!9;UBERON:0001277!2.49e-12!9;UBERON:0004119!1.24e-11!130;UBERON:0000925!1.24e-11!130;UBERON:0006595!1.24e-11!130;UBERON:0004923!1.40e-11!24;UBERON:0001007!2.36e-11!128;UBERON:0001555!2.36e-11!128;UBERON:0007026!2.36e-11!128;UBERON:0004921!3.90e-10!126;UBERON:0004185!3.90e-10!126;UBERON:0000485!1.36e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.78e-50,31;UBERON:0000344,1.25e-39,15;UBERON:0001242,3.74e-35,13;UBERON:0001262,3.74e-35,13;UBERON:0004786,3.74e-35,13;UBERON:0005409,5.39e-34,47;UBERON:0003350,2.76e-24,9;UBERON:0004808,2.76e-24,9;UBERON:0001277,2.76e-24,9;UBERON:0004923,1.79e-23,24;UBERON:0000485,1.47e-19,11;UBERON:0001007,8.17e-14,116;UBERON:0001555,8.17e-14,116;UBERON:0007026,8.17e-14,116;UBERON:0004119,1.77e-13,118;UBERON:0000925,1.77e-13,118;UBERON:0006595,1.77e-13,118;UBERON:0002108,5.83e-12,4;UBERON:0004921,8.75e-12,114;UBERON:0000331,1.03e-09,3;UBERON:0002116,1.03e-09,3;UBERON:0001204,1.03e-09,3;UBERON:0001168,1.03e-09,3 | |||
|phase1_expression=0,4.18770489167233,5.0049916332849,3.32710632437513,3.00537437967808,10.5763941304491,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,2.55987876469451,2.2940928106717,4.59385571292016,8.61523992318149,8.18790684206378,7.9809836171677,8.31699428207772,7.53883736228036,0,0,0,6.64358725427932,4.3221007793208,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.51657333504435,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.36459815938042,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.90895623329899,0,0,0,0.605050573870028,0.889512175379481,0.951128130562796,2.84717436926707,1.97638745668813,1.50801125280162,1.79060824837036,2.33956904542944,1.79763881730844,3.24207074812041,3.58454291857861,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.269728692769641,0.247960367176008,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,1.46521299413812,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,4.18770489167233,5.0049916332849,3.32710632437513,3.00537437967808,10.5763941304491,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,2.55987876469451,2.2940928106717,4.59385571292016,8.61523992318149,8.18790684206378,7.9809836171677,8.31699428207772,7.53883736228036,0,0,0,6.64358725427932,4.3221007793208,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.51657333504435,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.36459815938042,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.90895623329899,0,0,0,0.605050573870028,0.889512175379481,0.951128130562796,2.84717436926707,1.97638745668813,1.50801125280162,1.79060824837036,2.33956904542944,1.79763881730844,3.24207074812041,3.58454291857861,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.269728692769641,0.247960367176008,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,1.46521299413812,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p4@Tjp3 | |||
}} | }} |
Latest revision as of 10:57, 26 September 2015
Short description: | p4@Tjp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tjp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 54bp_to_uc007ghb.1_5end |
EntrezGene: | Tjp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.76e-24 | 9 |
epithelial cell of alimentary canal | 2.76e-24 | 9 |
endo-epithelial cell | 7.06e-17 | 15 |
brush border epithelial cell | 1.01e-16 | 6 |
gut absorptive cell | 1.01e-16 | 6 |
enterocyte | 1.01e-16 | 6 |
epithelial cell | 1.54e-16 | 25 |
columnar/cuboidal epithelial cell | 3.12e-14 | 7 |
endodermal cell | 3.68e-12 | 20 |
M cell of gut | 1.25e-09 | 3 |
intestinal crypt stem cell | 3.92e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.78e-50 | 31 |
mucosa | 1.25e-39 | 15 |
intestinal mucosa | 3.74e-35 | 13 |
wall of intestine | 3.74e-35 | 13 |
gastrointestinal system mucosa | 3.74e-35 | 13 |
gastrointestinal system | 5.39e-34 | 47 |
epithelium of mucosa | 2.76e-24 | 9 |
gastrointestinal system epithelium | 2.76e-24 | 9 |
intestinal epithelium | 2.76e-24 | 9 |
organ component layer | 1.79e-23 | 24 |
simple columnar epithelium | 1.47e-19 | 11 |
digestive system | 8.17e-14 | 116 |
digestive tract | 8.17e-14 | 116 |
primitive gut | 8.17e-14 | 116 |
endoderm-derived structure | 1.77e-13 | 118 |
endoderm | 1.77e-13 | 118 |
presumptive endoderm | 1.77e-13 | 118 |
small intestine | 5.83e-12 | 4 |
subdivision of digestive tract | 8.75e-12 | 114 |
ileal mucosa | 1.03e-09 | 3 |
ileum | 1.03e-09 | 3 |
mucosa of small intestine | 1.03e-09 | 3 |
wall of small intestine | 1.03e-09 | 3 |