FFCP PHASE1:Mm9::chr9:20935695..20935732,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:20935695..20935732,-
|short_description=p1@Tyk2
|description=CAGE_peak_1_at_Tyk2_5end
|association_with_transcript=0bp_to_NM_001205312,NM_018793,uc009oke.1...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54721 | |EntrezGene=54721 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=513 | |||
|TSSclassifier=NA | |||
|UniProt=E9QJS1,Q3TXE3,Q52KQ2,Q3U447 | |UniProt=E9QJS1,Q3TXE3,Q52KQ2,Q3U447 | ||
|association_with_transcript=0bp_to_NM_001205312,NM_018793,uc009oke.1,uc009okf.1,uc012gpb.1_5end | |||
|cluster_id=chr9:20935695..20935732,- | |||
|description=CAGE_peak_1_at_Tyk2_5end | |||
|id=chr9:20935695..20935732,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.13e-14!59;UBERON:0004119!4.42e-12!130;UBERON:0000925!4.42e-12!130;UBERON:0006595!4.42e-12!130;UBERON:0001007!4.61e-12!128;UBERON:0001555!4.61e-12!128;UBERON:0007026!4.61e-12!128;UBERON:0007023!7.51e-12!51;UBERON:0004921!1.52e-11!126;UBERON:0004185!1.52e-11!126;UBERON:0000160!3.56e-11!43;UBERON:0004923!1.09e-08!24;UBERON:0000344!2.85e-07!15;UBERON:0001242!6.71e-07!13;UBERON:0000060!6.71e-07!13;UBERON:0001262!6.71e-07!13;UBERON:0004786!6.71e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.49e-14,47;UBERON:0007023,7.39e-12,51;UBERON:0000160,1.02e-11,31;UBERON:0004119,3.36e-11,118;UBERON:0000925,3.36e-11,118;UBERON:0006595,3.36e-11,118;UBERON:0001007,3.39e-11,116;UBERON:0001555,3.39e-11,116;UBERON:0007026,3.39e-11,116;UBERON:0004921,1.07e-10,114;UBERON:0004923,1.08e-08,24;UBERON:0000344,2.82e-07,15;UBERON:0001242,6.65e-07,13;UBERON:0001262,6.65e-07,13;UBERON:0004786,6.65e-07,13 | |||
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|phase1_expression=0.480446541314382,14.3079917132138,15.9249733786338,19.3577095236371,19.5349334679075,7.05092942029937,7.70921713965235,4.9066862907799,0.563154888606667,0.70219357896598,0.171217968225505,0.558405112967355,5.30722262786738,4.98296293788285,4.33042690360362,5.87178275430495,4.19737126876888,5.0473946457318,9.32378148519024,7.21462408056651,5.44277056966847,2.97872853602656,1.56719873483361,5.91971964335605,5.04700418347774,6.31655160526522,8.18447792702242,5.60225204983311,12.5415456841207,9.32511480111744,6.87364583031445,2.54012269383853,4.92051830067656,0,6.35473563452804,2.99222361645286,4.49172583777212,7.53356935326434,9.37602413428561,7.32933241563318,12.3528612486513,6.14740936462601,8.25367600152961,2.39203954153597,1.62203089951223,1.28482726513177,0,0.872100625521786,1.5378032791413,1.36100929351998,1.53985063787899,0,3.6912173332702,7.25362142011344,5.04140698713696,1.28629718017973,3.43840127926508,2.57836046138721,1.01158230429799,1.5869729378161,1.26766280701236,1.69422266034566,3.55717918444456,13.0485459005803,7.9109309005358,12.7886420690298,4.19440154725767,3.07374644257244,1.34796496001021,1.35005938331691,1.68259969081106,1.42825492201902,0.883474163806454,1.22490799214954,1.24599112323707,0.919218786610021,2.20231761998777,2.93680877595932,2.91852413186863,1.97829431595291,1.73826522844578,1.56274011167028,3.62937898701795,3.93933827022176,2.90316670775939,1.76777151284201,0.854230084794618,1.4911955666024,1.13589289999776,1.51143120213571,8.40607017234866,2.58127163094416,0.679971333707751,6.47643829965381,5.19821133958135,5.37632264516803,5.47733238513832,2.21559419351475,1.81850203222008,0.70667914902068,0.845060518660083,3.84979432242953,0,0,3.68034769719064,3.29367825117628,6.0662933401774,3.53970027129086,6.47344709117929,3.85949561568544,2.08182392119363,2.43572382649713,2.7673859670727,3.46662073271032,3.05730638552832,3.39299796590124,4.6967043869531,5.35017620603673,8.84610551949874,2.91180329905337,5.07935492458905,4.363877278217,16.775258509631,9.66176630138106,8.3778682725382,14.5610521468897,2.15667224110656,2.99951365496704,4.06624726633807,5.99162557619291,2.28750301409313,1.00523481690292,2.78118912307642,3.3243009452943,4.57133698031032,3.56930778749067,1.93494791315601,5.349499736234,1.26361379216837,8.20723237957248,1.04096354370163,2.06911893990126,1.44049703844279,1.9591626318643,1.42876648217788,2.8185018462667,3.18585863503078,4.65666067330228,0.862271971731369,1.32374256117473,1.23165786914764,1.31517439456545,1.94633074457919,1.74126083261083,1.64625709126355,1.19420560091096,4.21327912387941,4.63226232806487,7.672414483681,1.86413195281952,1.87620847984877,1.2604344302271,2.84093682702252,4.13204886669548,2.1597395804233,2.79040733700489,3.48755421819505,2.10177616260905,2.79751744852917,2.79084688934462,3.81023404865522,5.26319954731196,3.73235195994786,4.56301823785264,3.57492912559016,1.44066457330998,20.1555457620117,8.99131926656051,1.06644125267617,2.09013004674395,3.73715637834071,4.23535401709019,5.78182913996663,8.56015317506516,10.4396393539793,6.42325923423642,7.28872105520782,8.15721535368718,8.96834800747953,7.19055526923377,7.3486936957396,12.3467589417708,0.948339504765408,0.799739588268102,2.25415471346161,3.66572390121566,3.29719228184964,1.40271639780637,3.47800954183415,3.98547399544926,5.33795674660674,5.05928372079382,5.33614728756868,2.50267658574141,3.14494392181125,2.24862112384854,2.43432145666204,2.894125917029,3.05551022137704,2.87696137450811,3.89124544260085,3.84385978463314,5.75072826109418,1.86070473834252,3.12037673114561,3.78868316920668,5.38192240565737,5.30687873499704,10.1614254591633,0.947457058852424,1.62964976442026,0.848725428875941,2.34690248288502,4.85768146581266,5.2369600994923,5.07347484430277,3.94087860265477,3.10050565508285,6.218735977642,6.22680595919804,9.84304396635605,8.67894351489069,7.53956419696361,11.9659250440116,5.90117127622843,3.86311444826625,4.17431533968259,3.98519734413491,0.163934945376675,4.03953483526997,0.94652465824877,0.390438744296638,1.07711698866399,0.955875191810208,0.891194696329576,0.849229592366497,2.42886421004937,0.292255857911312,1.18586333383957,4.81981974632711,2.98074178937364,2.84904965867608,1.30309567482861,5.60898418106621,10.619611067197,1.45668381692989,2.11626489875326,3.58349651536206,3.54362271456927,5.22639751504677,2.84271122485043,4.72593848320757,3.92147116223193,6.63677191665214,4.21674434299995,6.18813259489121,6.46835250932197,0.540183282093931,2.06973894052407,1.07168517515796,1.95074257006501,2.31879462882692,2.13913726782757,2.43571959291679,3.75474732901937,3.38931313382112,7.93902232997863,4.122156323537,2.74489525383039,2.35220407219808,2.98430860007841,3.61109979439135,8.45294426226567,4.26478194624172,5.98048082792484,4.95328483111734,7.03739204004904,6.2161590811548,6.01454601972511,7.32090154260872,4.07948231985253,4.3384950220334,2.21119958087078,4.77335309007557,0.790839983952838,4.87966721104437,3.45617090629764,5.01811910434725,5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| ||
|short_description=p1@Tyk2 | |||
}} | }} |
Latest revision as of 11:05, 26 September 2015
Short description: | p1@Tyk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tyk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:513 |
Association with transcript: | 0bp_to_NM_001205312, NM_018793, uc009oke.1, uc009okf.1, uc012gpb.1_5end |
EntrezGene: | Tyk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.49e-14 | 47 |
adult organism | 7.39e-12 | 51 |
intestine | 1.02e-11 | 31 |
endoderm-derived structure | 3.36e-11 | 118 |
endoderm | 3.36e-11 | 118 |
presumptive endoderm | 3.36e-11 | 118 |
digestive system | 3.39e-11 | 116 |
digestive tract | 3.39e-11 | 116 |
primitive gut | 3.39e-11 | 116 |
subdivision of digestive tract | 1.07e-10 | 114 |
organ component layer | 1.08e-08 | 24 |
mucosa | 2.82e-07 | 15 |
intestinal mucosa | 6.65e-07 | 13 |
wall of intestine | 6.65e-07 | 13 |
gastrointestinal system mucosa | 6.65e-07 | 13 |