FFCP PHASE1:Mm9::chr10:80986875..80986884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14676 | |EntrezGene=14676 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P30678 | |UniProt=P30678 | ||
|association_with_transcript=85bp_to_ENSMUST00000043709,NM_010304,uc007gij.1_5end | |association_with_transcript=85bp_to_ENSMUST00000043709,NM_010304,uc007gij.1_5end | ||
|cluster_id=chr10:80986875..80986884,- | |||
|description=CAGE_peak_3_at_Gna15_5end | |description=CAGE_peak_3_at_Gna15_5end | ||
|id=chr10:80986875..80986884,- | |id=chr10:80986875..80986884,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.15e-08,3;CL:0002202,4.15e-08,3;CL:0000069,4.15e-08,3;CL:0002632,4.15e-08,3;CL:0002368,4.15e-08,3;CL:0000307,4.15e-08,3;CL:0000377,4.15e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.93e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.47e-15,5;UBERON:0001003,1.47e-15,5;UBERON:0002097,1.47e-15,5;UBERON:0002199,1.47e-15,5;UBERON:0007029,1.47e-15,5;UBERON:0007376,1.47e-15,5;UBERON:0002416,1.47e-15,5;UBERON:0007383,1.47e-15,5;UBERON:0003102,6.09e-10,22;UBERON:0003126,4.15e-08,3;UBERON:0001005,4.15e-08,3;UBERON:0007196,4.15e-08,3;UBERON:0001558,4.15e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,2.02475267389826,0.699561878128147,0.630924330716475,0.548457734422955,0.84877930359606,0,1.58865521921416,1.30599894569468,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.51118978442145,0,0.523523743973798,2.35292595212406,2.04913645487534,0.485510353031154,0,0,0,0,0,0.219686182734472,0,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,1.3498495759221,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.01343946190039,1.01104889002957,0,0.776813650941515,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.599075622529601,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,1.74126083261083,0.411564272815887,0,0.702213187313235,0.772043721344145,0.852490498186778,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0,0,0,0,0.333690211432188,1.17935397067922,0.674586337154561,0.405720242777006,0,0.50925170356284,0.575392274901621,0.162135226775035,0,0,1.11642284300551,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0.433947175744535,0,1.63171705145613,3.93411418415229,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0.584511715822624,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.122156323537,2.09903754704677,2.77439454669517,2.38744688006273,2.62625439592098,0,0,1.70870880797853,0.206386867963223,0.925972636848558,0.941842285023455,1.77702496037333,1.37266903923914,0.169978429993855,0.139951452323658,1.24379976423981,0,0.158167996790568,0.203319467126849,0.540026704109006,0.627264888043406,1.74690050996942,1.21377911746339,0.826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,3.40095575422817,0.665957860122194,0.0897138566094757,0.671538465456314,3.47741269257943,0.93841237725591,0,4.71610433973945,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0.729320151204882,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0,0.154936841185966,0.578719832943424,0.499621155875892,0.935726433781634,0.429742108096597,0.191288332068843,1.32354851471709,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,2.02475267389826,0.699561878128147,0.630924330716475,0.548457734422955,0.84877930359606,0,1.58865521921416,1.30599894569468,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.51118978442145,0,0.523523743973798,2.35292595212406,2.04913645487534,0.485510353031154,0,0,0,0,0,0.219686182734472,0,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,1.3498495759221,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.01343946190039,1.01104889002957,0,0.776813650941515,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.599075622529601,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,1.74126083261083,0.411564272815887,0,0.702213187313235,0.772043721344145,0.852490498186778,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0,0,0,0,0.333690211432188,1.17935397067922,0.674586337154561,0.405720242777006,0,0.50925170356284,0.575392274901621,0.162135226775035,0,0,1.11642284300551,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0.433947175744535,0,1.63171705145613,3.93411418415229,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0.584511715822624,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.122156323537,2.09903754704677,2.77439454669517,2.38744688006273,2.62625439592098,0,0,1.70870880797853,0.206386867963223,0.925972636848558,0.941842285023455,1.77702496037333,1.37266903923914,0.169978429993855,0.139951452323658,1.24379976423981,0,0.158167996790568,0.203319467126849,0.540026704109006,0.627264888043406,1.74690050996942,1.21377911746339,0.826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,3.40095575422817,0.665957860122194,0.0897138566094757,0.671538465456314,3.47741269257943,0.93841237725591,0,4.71610433973945,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0.729320151204882,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0,0.154936841185966,0.578719832943424,0.499621155875892,0.935726433781634,0.429742108096597,0.191288332068843,1.32354851471709,0 | ||
|short_description=p3@Gna15 | |short_description=p3@Gna15 | ||
}} | }} |
Latest revision as of 11:18, 26 September 2015
Short description: | p3@Gna15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gna15_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENSMUST00000043709, NM_010304, uc007gij.1_5end |
EntrezGene: | Gna15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.15e-08 | 3 |
epithelial cell of tracheobronchial tree | 4.15e-08 | 3 |
branched duct epithelial cell | 4.15e-08 | 3 |
epithelial cell of lower respiratory tract | 4.15e-08 | 3 |
respiratory epithelial cell | 4.15e-08 | 3 |
tracheal epithelial cell | 4.15e-08 | 3 |
tracheoblast | 4.15e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.47e-15 | 5 |
skin epidermis | 1.47e-15 | 5 |
skin of body | 1.47e-15 | 5 |
integument | 1.47e-15 | 5 |
surface | 1.47e-15 | 5 |
outer epithelium | 1.47e-15 | 5 |
integumental system | 1.47e-15 | 5 |
enveloping layer of ectoderm | 1.47e-15 | 5 |
surface structure | 6.09e-10 | 22 |
trachea | 4.15e-08 | 3 |
respiratory airway | 4.15e-08 | 3 |
tracheobronchial tree | 4.15e-08 | 3 |
lower respiratory tract | 4.15e-08 | 3 |