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FFCP PHASE1:Mm9::chr1:138857076..138857105,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=26424
|EntrezGene=26424
|HGNC=
|HGNC=
|MCL_coexpression_id=1146
|TSSclassifier=NA
|UniProt=P45448
|UniProt=P45448
|association_with_transcript=-51bp_to_NM_030676,uc007cvc.2_5end
|association_with_transcript=-51bp_to_NM_030676,uc007cvc.2_5end
|cluster_id=chr1:138857076..138857105,-
|description=CAGE_peak_1_at_Nr5a2_5end
|description=CAGE_peak_1_at_Nr5a2_5end
|id=chr1:138857076..138857105,-
|id=chr1:138857076..138857105,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,5.88e-08,25;CL:0000223,3.18e-07,20;CL:0002563,4.51e-07,9;CL:0002251,4.51e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!5.22e-29!43;UBERON:0005409!9.34e-28!59;UBERON:0001007!5.92e-23!128;UBERON:0001555!5.92e-23!128;UBERON:0007026!5.92e-23!128;UBERON:0004119!3.48e-22!130;UBERON:0000925!3.48e-22!130;UBERON:0006595!3.48e-22!130;UBERON:0004921!7.79e-22!126;UBERON:0004185!7.79e-22!126;UBERON:0002107!3.44e-17!22;UBERON:0007499!3.44e-17!22;UBERON:0006925!3.44e-17!22;UBERON:0009497!3.44e-17!22;UBERON:0000015!3.44e-17!22;UBERON:0002423!3.44e-17!22;UBERON:0006235!3.44e-17!22;UBERON:0008835!3.44e-17!22;UBERON:0003894!3.44e-17!22;UBERON:0004161!3.44e-17!22;UBERON:0008836!3.44e-17!22;UBERON:0009854!4.71e-16!23;UBERON:0009856!4.71e-16!23;UBERON:0002108!2.82e-15!16;UBERON:0002365!4.56e-14!25;UBERON:0002330!4.56e-14!25;UBERON:0001264!6.67e-13!12;UBERON:0003922!6.67e-13!12;UBERON:0002114!6.67e-13!12;UBERON:0003923!6.67e-13!12;UBERON:0003924!6.67e-13!12;UBERON:0003921!6.67e-13!12;UBERON:0001045!1.63e-11!13;UBERON:0000949!7.83e-09!72;UBERON:0000344!1.01e-08!15;UBERON:0001041!3.05e-08!92;UBERON:0002075!3.88e-08!19;UBERON:0001242!8.95e-08!13;UBERON:0000060!8.95e-08!13;UBERON:0001262!8.95e-08!13;UBERON:0004786!8.95e-08!13;UBERON:0003929!9.42e-08!55;UBERON:0005177!2.33e-07!85;UBERON:0000466!3.75e-07!79;UBERON:0000077!4.09e-07!97;UBERON:0005172!8.80e-07!49;UBERON:0005173!8.80e-07!49;UBERON:0002417!8.80e-07!49;UBERON:0000916!8.80e-07!49
|ontology_enrichment_uberon=UBERON:0000160!5.22e-29!43;UBERON:0005409!9.34e-28!59;UBERON:0001007!5.92e-23!128;UBERON:0001555!5.92e-23!128;UBERON:0007026!5.92e-23!128;UBERON:0004119!3.48e-22!130;UBERON:0000925!3.48e-22!130;UBERON:0006595!3.48e-22!130;UBERON:0004921!7.79e-22!126;UBERON:0004185!7.79e-22!126;UBERON:0002107!3.44e-17!22;UBERON:0007499!3.44e-17!22;UBERON:0006925!3.44e-17!22;UBERON:0009497!3.44e-17!22;UBERON:0000015!3.44e-17!22;UBERON:0002423!3.44e-17!22;UBERON:0006235!3.44e-17!22;UBERON:0008835!3.44e-17!22;UBERON:0003894!3.44e-17!22;UBERON:0004161!3.44e-17!22;UBERON:0008836!3.44e-17!22;UBERON:0009854!4.71e-16!23;UBERON:0009856!4.71e-16!23;UBERON:0002108!2.82e-15!16;UBERON:0002365!4.56e-14!25;UBERON:0002330!4.56e-14!25;UBERON:0001264!6.67e-13!12;UBERON:0003922!6.67e-13!12;UBERON:0002114!6.67e-13!12;UBERON:0003923!6.67e-13!12;UBERON:0003924!6.67e-13!12;UBERON:0003921!6.67e-13!12;UBERON:0001045!1.63e-11!13;UBERON:0000949!7.83e-09!72;UBERON:0000344!1.01e-08!15;UBERON:0001041!3.05e-08!92;UBERON:0002075!3.88e-08!19;UBERON:0001242!8.95e-08!13;UBERON:0000060!8.95e-08!13;UBERON:0001262!8.95e-08!13;UBERON:0004786!8.95e-08!13;UBERON:0003929!9.42e-08!55;UBERON:0005177!2.33e-07!85;UBERON:0000466!3.75e-07!79;UBERON:0000077!4.09e-07!97;UBERON:0005172!8.80e-07!49;UBERON:0005173!8.80e-07!49;UBERON:0002417!8.80e-07!49;UBERON:0000916!8.80e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.18e-23,22;UBERON:0007499,9.18e-23,22;UBERON:0006925,9.18e-23,22;UBERON:0009497,9.18e-23,22;UBERON:0000015,9.18e-23,22;UBERON:0002423,9.18e-23,22;UBERON:0006235,9.18e-23,22;UBERON:0008835,9.18e-23,22;UBERON:0003894,9.18e-23,22;UBERON:0004161,9.18e-23,22;UBERON:0008836,9.18e-23,22;UBERON:0009854,1.85e-21,23;UBERON:0009856,1.85e-21,23;UBERON:0002365,3.60e-19,25;UBERON:0002330,3.60e-19,25;UBERON:0000160,5.43e-19,31;UBERON:0001264,6.12e-17,12;UBERON:0001007,2.54e-16,116;UBERON:0001555,2.54e-16,116;UBERON:0007026,2.54e-16,116;UBERON:0004119,8.66e-16,118;UBERON:0000925,8.66e-16,118;UBERON:0006595,8.66e-16,118;UBERON:0004921,3.46e-15,114;UBERON:0005409,3.49e-14,47;UBERON:0000949,1.40e-12,72;UBERON:0003929,4.39e-12,55;UBERON:0000344,1.75e-11,15;UBERON:0005177,1.47e-10,79;UBERON:0001242,3.36e-10,13;UBERON:0001262,3.36e-10,13;UBERON:0004786,3.36e-10,13;UBERON:0002075,3.06e-09,19;UBERON:0000490,1.15e-08,66;UBERON:0002100,4.51e-08,90;UBERON:0005911,6.14e-08,69;UBERON:0005256,9.69e-08,45;UBERON:0003914,3.68e-07,47;UBERON:0003350,4.51e-07,9;UBERON:0004808,4.51e-07,9;UBERON:0001277,4.51e-07,9
|phase1_expression=0,1.04692622291808,0,2.72217790176147,2.50447864973174,2.35030980676646,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,1.83527424853736,2.29692785646008,2.15380998079537,1.50829862880122,2.47030445293286,3.02436155711917,2.21730510655305,0,0,0,8.37669697278696,4.3221007793208,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,2.719885334831,13.4925797909454,13.6453047664011,14.3368603871147,3.23022166303029,0,0,0,0,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0.691846491768175,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,4.7601101999438,0.853153002140936,0.696710015581316,3.47942145569652,4.63872106633688,2.89091456998331,2.09248188723815,2.37264530772256,1.81168850196412,2.76468729680296,0.596869416123452,3.50935356814416,5.39291645192533,5.40345124686736,3.98282546508734,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,8.89357881261447,3.00321190288969,2.75182593158484,3.37293168577281,2.84004169943904,4.3411888755435,3.31013607315846,2.5892652370573,1.29708181420028,4.66754402419738,18.6898668485561,9.30352369171258,10.2972432127805,13.639259409144,15.0693827358406,9.64887042726734,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,37.1686387351896,8.49732226542435,14.8138542912728,32.0628635585027,19.1946230372502,20.2907197642992,10.0787034335606,32.7180356529755,31.7282666762402,31.6036757935816,39.0048851727495,22.6898195146011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53813589596716,0,0,0.82554747185289,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,4.87966721104437,2.16010681643603,0,0.436725127492355,0.404593039154462,1.32245529160537,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.729320151204882,1.88651846365184,0.183843508450014,0.666740183404846,1.64828045791115,0.962757628775446,0.758091635291392,0,0.943131706930381,0.655490552289177,0.576226371643824,0.689225627467359,0.952587382566147,0.231768651889711,0.38581844092741,1.64834360321323,0.735994600671987,1.71434626192708,1.06485483695602,0.238436189947321,0.872078499793971,1.03520318456864,0.507687647350059,0.182927972872773,1.05227884575137,0.543216455383447,0,0.593175090620871,0.29551344712669,0,0.309873682371932,2.3148793317737,0,0.233931608445408,1.07435527024149,0.191288332068843,0,0
|phase1_expression=0,1.04692622291808,0,2.72217790176147,2.50447864973174,2.35030980676646,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,1.83527424853736,2.29692785646008,2.15380998079537,1.50829862880122,2.47030445293286,3.02436155711917,2.21730510655305,0,0,0,8.37669697278696,4.3221007793208,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,2.719885334831,13.4925797909454,13.6453047664011,14.3368603871147,3.23022166303029,0,0,0,0,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0.691846491768175,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,4.7601101999438,0.853153002140936,0.696710015581316,3.47942145569652,4.63872106633688,2.89091456998331,2.09248188723815,2.37264530772256,1.81168850196412,2.76468729680296,0.596869416123452,3.50935356814416,5.39291645192533,5.40345124686736,3.98282546508734,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,8.89357881261447,3.00321190288969,2.75182593158484,3.37293168577281,2.84004169943904,4.3411888755435,3.31013607315846,2.5892652370573,1.29708181420028,4.66754402419738,18.6898668485561,9.30352369171258,10.2972432127805,13.639259409144,15.0693827358406,9.64887042726734,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,37.1686387351896,8.49732226542435,14.8138542912728,32.0628635585027,19.1946230372502,20.2907197642992,10.0787034335606,32.7180356529755,31.7282666762402,31.6036757935816,39.0048851727495,22.6898195146011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53813589596716,0,0,0.82554747185289,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,4.87966721104437,2.16010681643603,0,0.436725127492355,0.404593039154462,1.32245529160537,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.729320151204882,1.88651846365184,0.183843508450014,0.666740183404846,1.64828045791115,0.962757628775446,0.758091635291392,0,0.943131706930381,0.655490552289177,0.576226371643824,0.689225627467359,0.952587382566147,0.231768651889711,0.38581844092741,1.64834360321323,0.735994600671987,1.71434626192708,1.06485483695602,0.238436189947321,0.872078499793971,1.03520318456864,0.507687647350059,0.182927972872773,1.05227884575137,0.543216455383447,0,0.593175090620871,0.29551344712669,0,0.309873682371932,2.3148793317737,0,0.233931608445408,1.07435527024149,0.191288332068843,0,0
|short_description=p1@Nr5a2
|short_description=p1@Nr5a2
}}
}}

Latest revision as of 11:33, 26 September 2015

Short description:p1@Nr5a2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nr5a2_5end
Coexpression cluster:MCL_coexpression_mm9:1146
Association with transcript: -51bp_to_NM_030676, uc007cvc.2_5end
EntrezGene:Nr5a2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nr5a2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A313.64
liver, neonate N25.CNhs11198.1368-26H115.07
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E532.06
pancreas, embryo E17.CNhs10599.1558-45G319.19
pancreas, embryo E18.CNhs10580.1535-43I720.29
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D732.72
pancreas, neonate N02.CNhs11139.1539-43D831.73
pancreas, neonate N16.CNhs11136.787-43B631.60
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.88e-0825
endodermal cell3.18e-0720
intestinal epithelial cell4.51e-079
epithelial cell of alimentary canal4.51e-079

Uber anatomy
Ontology termp-valuen
liver9.18e-2322
epithelial sac9.18e-2322
digestive gland9.18e-2322
epithelium of foregut-midgut junction9.18e-2322
anatomical boundary9.18e-2322
hepatobiliary system9.18e-2322
foregut-midgut junction9.18e-2322
hepatic diverticulum9.18e-2322
liver primordium9.18e-2322
septum transversum9.18e-2322
liver bud9.18e-2322
digestive tract diverticulum1.85e-2123
sac1.85e-2123
exocrine gland3.60e-1925
exocrine system3.60e-1925
intestine5.43e-1931
pancreas6.12e-1712
digestive system2.54e-16116
digestive tract2.54e-16116
primitive gut2.54e-16116
endoderm-derived structure8.66e-16118
endoderm8.66e-16118
presumptive endoderm8.66e-16118
subdivision of digestive tract3.46e-15114
gastrointestinal system3.49e-1447
endocrine system1.40e-1272
gut epithelium4.39e-1255
mucosa1.75e-1115
trunk region element1.47e-1079
intestinal mucosa3.36e-1013
wall of intestine3.36e-1013
gastrointestinal system mucosa3.36e-1013
viscus3.06e-0919
unilaminar epithelium1.15e-0866
trunk4.51e-0890
endo-epithelium6.14e-0869
trunk mesenchyme9.69e-0845
epithelial tube3.68e-0747
epithelium of mucosa4.51e-079
gastrointestinal system epithelium4.51e-079
intestinal epithelium4.51e-079
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