Personal tools

FFCP PHASE1:Mm9::chr6:113588477..113588538,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:113588477..113588538,+
|DHSsupport=NA
|short_description=p1@Irak2
|DPIdataset=NA
|description=CAGE_peak_1_at_Irak2_5end
|association_with_transcript=0bp_to_ENSMUST00000089022,ENSMUST00000089023,ENSMUST00000167194_5end
|EntrezGene=108960
|EntrezGene=108960
|HGNC=
|HGNC=
|MCL_coexpression_id=513
|TSSclassifier=NA
|UniProt=Q8CFA1
|UniProt=Q8CFA1
|association_with_transcript=0bp_to_ENSMUST00000089022,ENSMUST00000089023,ENSMUST00000167194_5end
|cluster_id=chr6:113588477..113588538,+
|description=CAGE_peak_1_at_Irak2_5end
|id=chr6:113588477..113588538,+
|ontology_enrichment_celltype=CL:0000063!3.49e-07!66
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.16e-11!51;UBERON:0000160!2.52e-10!43;UBERON:0005409!6.01e-10!59;UBERON:0004119!1.76e-08!130;UBERON:0000925!1.76e-08!130;UBERON:0006595!1.76e-08!130;UBERON:0001007!4.92e-08!128;UBERON:0001555!4.92e-08!128;UBERON:0007026!4.92e-08!128;UBERON:0004923!6.44e-08!24;UBERON:0000344!8.99e-08!15;UBERON:0004921!2.25e-07!126;UBERON:0004185!2.25e-07!126;UBERON:0001242!8.00e-07!13;UBERON:0000060!8.00e-07!13;UBERON:0001262!8.00e-07!13;UBERON:0004786!8.00e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-11,51;UBERON:0000160,3.82e-11,31;UBERON:0005409,4.77e-10,47;UBERON:0004923,6.41e-08,24;UBERON:0004119,7.36e-08,118;UBERON:0000925,7.36e-08,118;UBERON:0006595,7.36e-08,118;UBERON:0000344,8.95e-08,15;UBERON:0001007,1.98e-07,116;UBERON:0001555,1.98e-07,116;UBERON:0007026,1.98e-07,116;UBERON:0001242,7.97e-07,13;UBERON:0001262,7.97e-07,13;UBERON:0004786,7.97e-07,13;UBERON:0004921,8.62e-07,114
|phase1_expression=5.44506080156299,134.355531941154,154.699741392442,193.274631025064,223.399495556071,30.7219067598758,25.4637778249123,24.6625547773411,37.590588814495,43.5360018958908,20.7173741552861,22.8148374726662,15.7504671536709,12.4136971434976,10.9926221399169,10.1237633694913,2.79824751251259,41.7987369099665,55.6684600439299,42.438965179803,10.4603246885816,10.3262589248921,8.097193463307,36.6382648196901,37.6231220950159,104.510217468934,82.2755412663833,65.5032547365103,62.3276815816906,51.1621163412659,31.7074630237086,0.635030673459631,0.61506478758457,0,14.1537293678125,9.14290549471708,10.8209758819056,43.9458212273753,30.4720784364282,25.1291397107423,72.3524730278148,63.5232301011354,50.0075663622088,4.02869817521847,3.64956952390252,2.56965453026354,4.69434806608824,2.18025156380447,3.07560655828261,4.47188767870852,2.09979632438044,0,54.697129574822,20.3101399763176,16.8046899571232,4.3734104126111,5.15760191889762,3.6097046459421,0,1.05798195854407,0,2.71075625655306,0.889294796111139,50.844334026399,41.5323872278129,51.1545682761192,30.5592112728773,23.4373166246148,0.518448061542388,1.08004750665353,0.210324961351382,4.85606673486466,2.87129103237098,0.61245399607477,0.383381884072945,2.75765635983006,7.70811166995721,12.1302971180928,9.36999852863085,0.263772575460388,1.00636407962651,0.52091337055676,11.725685958058,14.069065250792,7.94550888439413,2.94628585473668,4.27115042397309,2.23679334990361,2.87759534666099,1.5870027622425,16.232411367294,17.2084775396277,11.5595126730318,26.445456390253,22.0923981932207,17.0250217096988,13.9039975930434,4.60161870960756,3.89679006904303,2.47337702157238,5.91542363062058,7.69958864485907,0,0,4.11332977921307,5.32055717497707,5.05524445014783,20.5530983494308,35.7334279433097,12.7660239595749,1.90833859442749,5.78484408793068,1.84492397804847,2.41156224884196,4.23319345688537,7.6656620711102,38.8096099342967,25.7386855317443,23.8844849026466,4.52947179852746,8.61281921995535,6.78825354389311,29.8226817948995,12.0040126774734,10.0534419270458,59.5214938636018,22.525243407113,13.7977628128484,22.3643599648594,12.8819949888148,19.2150253183823,1.63350657746724,14.0797699355744,10.7400492078739,15.584103341967,13.1415423084884,4.27725328171328,12.4406970610093,8.84529654517861,30.7245109594252,3.3831315170303,3.67843367093557,3.96136685571768,6.93242162044289,4.49040894398764,4.22775276940004,3.74806898238915,20.4375662883822,0.646703978798527,1.89106080167819,2.28736461413134,0.876782929710299,2.50242524303038,6.268538997399,6.79081050146213,1.99034266818493,13.3420505589515,14.6688307055388,15.0606654679664,4.55676699578104,3.75241695969754,3.06105504483725,2.60419209143731,2.55793501271625,3.08534225774756,3.95307706075693,2.95100741539581,5.3712057488898,4.27855609775049,6.895033491322,9.40398190731926,10.3801991071986,12.7339066868809,12.0785776884335,14.0894265537965,1.13195073617213,125.889556316827,45.2210468994661,2.55945900642281,3.94802342162745,4.25262622362908,11.6976444281539,15.5664630691409,24.158654516295,58.3670745699749,42.4923303187948,36.4436052760391,41.5819026566005,33.5338229844887,47.6374286586737,49.7117514711797,50.3827421333549,1.89667900953082,2.39921876480431,2.25415471346161,2.8511185898344,3.29719228184964,4.69909993265134,8.03104021478068,15.203845241899,14.2868842335651,17.2756029490521,13.933273473096,2.66952169145751,2.94838492669805,4.49724224769707,5.47722327748958,6.75296047306767,4.07401362850272,4.31544206176216,14.4300351829781,6.86403532970204,18.6898668485561,19.3513292787622,16.2259590019572,25.5104666726583,17.5809465251474,29.4290548031654,22.909395580659,2.08440552947533,0.977789858652155,2.71592137240301,3.52035372432753,5.52770649557992,5.95109102215034,9.56154874503214,11.1920952315396,11.0732344824387,10.2051051940792,14.7476983244164,16.577758259126,19.0936757327595,27.142431109069,46.2319831245903,15.7364567366092,15.7283945393698,15.8945084087914,16.7612711826851,3.27869890753351,6.5642441073137,0.631016438832513,0.780877488593277,0.646270193198397,1.67278158566786,0.891194696329576,0,0.809621403349789,0.584511715822624,0,17.3513510867776,9.65192579416227,4.98583690268315,6.51547837414304,16.332042174281,13.2745138339963,3.8844901784797,4.53485335447127,8.67583366877131,9.44966057218473,11.9899707698132,18.3484088149437,8.72480950746013,8.19943970284859,8.21695570633122,15.8127912862498,18.5643977846736,14.9793426531667,1.26042765821917,2.06973894052407,1.71469628025274,1.95074257006501,5.52943334566419,6.2528627828806,9.74287837166718,13.3762873596315,26.2671767871137,9.2621927183084,12.366468970611,10.333723308538,7.35817684123501,8.71418111222896,9.52017218521355,35.8521429054716,15.7611506708933,13.6696704638282,6.81076664278634,8.70414278637645,6.40452753815949,14.0795054552656,11.8964650067392,69.8611347274745,53.0416004306664,73.6605860377579,21.0027535963325,2.21435195506795,2.64315307264903,5.50827238191186,9.19988502463662,11.7915784422936,11.3286050963249,13.6378201946804,18.8464278228501,26.5710695248175,14.2908042009993,0.56369293868419,2.69129782879162,2.97825282822776,3.50012139019286,3.09983576346555,2.53434188236167,3.75543163666413,3.6457227756306,3.35549902162275,2.65742532908607,3.74439008135225,6.63623353319174,2.22997736819181,4.21114924375792,2.5984164595559,2.32734704367726,2.98022032171897,3.36547258655913,3.2491695978407,2.22126189885925,3.58171991278499,2.41982844328417,5.06780979846713,3.36741445741153,3.97381467417334,13.8305534005279,4.21773311410723,1.88399098879899,3.52557694364565,17.9666322449937,13.5131382324851,18.8646172995283,18.2213122217206,24.0754609936974,10.7302850097243,11.5081309126794,9.73922372846974,9.10821866421544,10.9613203163303,9.82012066606611,10.1253375034771,6.75481804836331,10.4222754066367,13.4617681055473,1.3492355185943,1.99512436700516,2.90247129782028,3.64660075602441,3.98265008993166,3.67687016900028,4.88942801163553,4.73880631649457,7.70206103020357,3.53776096469316,4.30914809813408,4.52703219326583,3.37109426891577,5.44213795441389,5.11175673704958,4.76293691283074,5.09891034157364,5.98018583437486,7.41754621445952,5.00476328456951,6.85738504770831,5.6792257970988,4.05341522910446,4.0696996657052,6.68176600948847,5.4153349050673,3.29270351170991,3.15683653725411,4.88894809845102,5.61142271657738,4.98267076121531,5.41774653065599,2.86461730218783,3.71848418846318,5.78719832943424,6.49507502638659,9.35726433781634,10.09893954027,8.60797494309795,7.50010825006353,8.57910991795559
|phase1_expression=5.44506080156299,134.355531941154,154.699741392442,193.274631025064,223.399495556071,30.7219067598758,25.4637778249123,24.6625547773411,37.590588814495,43.5360018958908,20.7173741552861,22.8148374726662,15.7504671536709,12.4136971434976,10.9926221399169,10.1237633694913,2.79824751251259,41.7987369099665,55.6684600439299,42.438965179803,10.4603246885816,10.3262589248921,8.097193463307,36.6382648196901,37.6231220950159,104.510217468934,82.2755412663833,65.5032547365103,62.3276815816906,51.1621163412659,31.7074630237086,0.635030673459631,0.61506478758457,0,14.1537293678125,9.14290549471708,10.8209758819056,43.9458212273753,30.4720784364282,25.1291397107423,72.3524730278148,63.5232301011354,50.0075663622088,4.02869817521847,3.64956952390252,2.56965453026354,4.69434806608824,2.18025156380447,3.07560655828261,4.47188767870852,2.09979632438044,0,54.697129574822,20.3101399763176,16.8046899571232,4.3734104126111,5.15760191889762,3.6097046459421,0,1.05798195854407,0,2.71075625655306,0.889294796111139,50.844334026399,41.5323872278129,51.1545682761192,30.5592112728773,23.4373166246148,0.518448061542388,1.08004750665353,0.210324961351382,4.85606673486466,2.87129103237098,0.61245399607477,0.383381884072945,2.75765635983006,7.70811166995721,12.1302971180928,9.36999852863085,0.263772575460388,1.00636407962651,0.52091337055676,11.725685958058,14.069065250792,7.94550888439413,2.94628585473668,4.27115042397309,2.23679334990361,2.87759534666099,1.5870027622425,16.232411367294,17.2084775396277,11.5595126730318,26.445456390253,22.0923981932207,17.0250217096988,13.9039975930434,4.60161870960756,3.89679006904303,2.47337702157238,5.91542363062058,7.69958864485907,0,0,4.11332977921307,5.32055717497707,5.05524445014783,20.5530983494308,35.7334279433097,12.7660239595749,1.90833859442749,5.78484408793068,1.84492397804847,2.41156224884196,4.23319345688537,7.6656620711102,38.8096099342967,25.7386855317443,23.8844849026466,4.52947179852746,8.61281921995535,6.78825354389311,29.8226817948995,12.0040126774734,10.0534419270458,59.5214938636018,22.525243407113,13.7977628128484,22.3643599648594,12.8819949888148,19.2150253183823,1.63350657746724,14.0797699355744,10.7400492078739,15.584103341967,13.1415423084884,4.27725328171328,12.4406970610093,8.84529654517861,30.7245109594252,3.3831315170303,3.67843367093557,3.96136685571768,6.93242162044289,4.49040894398764,4.22775276940004,3.74806898238915,20.4375662883822,0.646703978798527,1.89106080167819,2.28736461413134,0.876782929710299,2.50242524303038,6.268538997399,6.79081050146213,1.99034266818493,13.3420505589515,14.6688307055388,15.0606654679664,4.55676699578104,3.75241695969754,3.06105504483725,2.60419209143731,2.55793501271625,3.08534225774756,3.95307706075693,2.95100741539581,5.3712057488898,4.27855609775049,6.895033491322,9.40398190731926,10.3801991071986,12.7339066868809,12.0785776884335,14.0894265537965,1.13195073617213,125.889556316827,45.2210468994661,2.55945900642281,3.94802342162745,4.25262622362908,11.6976444281539,15.5664630691409,24.158654516295,58.3670745699749,42.4923303187948,36.4436052760391,41.5819026566005,33.5338229844887,47.6374286586737,49.7117514711797,50.3827421333549,1.89667900953082,2.39921876480431,2.25415471346161,2.8511185898344,3.29719228184964,4.69909993265134,8.03104021478068,15.203845241899,14.2868842335651,17.2756029490521,13.933273473096,2.66952169145751,2.94838492669805,4.49724224769707,5.47722327748958,6.75296047306767,4.07401362850272,4.31544206176216,14.4300351829781,6.86403532970204,18.6898668485561,19.3513292787622,16.2259590019572,25.5104666726583,17.5809465251474,29.4290548031654,22.909395580659,2.08440552947533,0.977789858652155,2.71592137240301,3.52035372432753,5.52770649557992,5.95109102215034,9.56154874503214,11.1920952315396,11.0732344824387,10.2051051940792,14.7476983244164,16.577758259126,19.0936757327595,27.142431109069,46.2319831245903,15.7364567366092,15.7283945393698,15.8945084087914,16.7612711826851,3.27869890753351,6.5642441073137,0.631016438832513,0.780877488593277,0.646270193198397,1.67278158566786,0.891194696329576,0,0.809621403349789,0.584511715822624,0,17.3513510867776,9.65192579416227,4.98583690268315,6.51547837414304,16.332042174281,13.2745138339963,3.8844901784797,4.53485335447127,8.67583366877131,9.44966057218473,11.9899707698132,18.3484088149437,8.72480950746013,8.19943970284859,8.21695570633122,15.8127912862498,18.5643977846736,14.9793426531667,1.26042765821917,2.06973894052407,1.71469628025274,1.95074257006501,5.52943334566419,6.2528627828806,9.74287837166718,13.3762873596315,26.2671767871137,9.2621927183084,12.366468970611,10.333723308538,7.35817684123501,8.71418111222896,9.52017218521355,35.8521429054716,15.7611506708933,13.6696704638282,6.81076664278634,8.70414278637645,6.40452753815949,14.0795054552656,11.8964650067392,69.8611347274745,53.0416004306664,73.6605860377579,21.0027535963325,2.21435195506795,2.64315307264903,5.50827238191186,9.19988502463662,11.7915784422936,11.3286050963249,13.6378201946804,18.8464278228501,26.5710695248175,14.2908042009993,0.56369293868419,2.69129782879162,2.97825282822776,3.50012139019286,3.09983576346555,2.53434188236167,3.75543163666413,3.6457227756306,3.35549902162275,2.65742532908607,3.74439008135225,6.63623353319174,2.22997736819181,4.21114924375792,2.5984164595559,2.32734704367726,2.98022032171897,3.36547258655913,3.2491695978407,2.22126189885925,3.58171991278499,2.41982844328417,5.06780979846713,3.36741445741153,3.97381467417334,13.8305534005279,4.21773311410723,1.88399098879899,3.52557694364565,17.9666322449937,13.5131382324851,18.8646172995283,18.2213122217206,24.0754609936974,10.7302850097243,11.5081309126794,9.73922372846974,9.10821866421544,10.9613203163303,9.82012066606611,10.1253375034771,6.75481804836331,10.4222754066367,13.4617681055473,1.3492355185943,1.99512436700516,2.90247129782028,3.64660075602441,3.98265008993166,3.67687016900028,4.88942801163553,4.73880631649457,7.70206103020357,3.53776096469316,4.30914809813408,4.52703219326583,3.37109426891577,5.44213795441389,5.11175673704958,4.76293691283074,5.09891034157364,5.98018583437486,7.41754621445952,5.00476328456951,6.85738504770831,5.6792257970988,4.05341522910446,4.0696996657052,6.68176600948847,5.4153349050673,3.29270351170991,3.15683653725411,4.88894809845102,5.61142271657738,4.98267076121531,5.41774653065599,2.86461730218783,3.71848418846318,5.78719832943424,6.49507502638659,9.35726433781634,10.09893954027,8.60797494309795,7.50010825006353,8.57910991795559
|short_description=p1@Irak2
}}
}}

Latest revision as of 11:36, 26 September 2015

Short description:p1@Irak2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Irak2_5end
Coexpression cluster:MCL_coexpression_mm9:513
Association with transcript: 0bp_to_ENSMUST00000089022, ENSMUST00000089023, ENSMUST00000167194_5end
EntrezGene:Irak2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Irak2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5134.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6154.70
CD326+ enterocyte, pool1.CNhs13542.11848-124I3193.27
CD326+ enterocyte, pool2.CNhs13197.11849-124I4223.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I730.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.46
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E737.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F122.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.12
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.80
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A455.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A642.44
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D237.62
GP2+ M cell, pool1.CNhs13228.11845-124H9104.51
GP2+ M cell, pool2.CNhs13231.11846-124I182.28
GP2+ M cell, pool3.CNhs13240.11847-124I265.50
Ileum epithelium, pool1.CNhs13199.10252-104B962.33
Ileum epithelium, pool2.CNhs13232.10253-104C151.16
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C831.71
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H130.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H325.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G972.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H263.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A254.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C750.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D251.15
Mouse Microglia, donor1.CNhs12629.11718-123C830.56
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.55
accessory axillary lymph node, adult.CNhs10475.1063-29H935.73
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A838.81
aorta, adult.CNhs10498.46-23H125.74
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H759.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.36
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G430.72
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.06
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G19.40
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D312.73
heart, neonate N30.CNhs11202.1390-42D212.08
hippocampus, adult.CNhs10478.13-16E814.09
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I3125.89
intestine, adult.CNhs10496.178-9A345.22
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F724.16
intestine, neonate N00.CNhs11126.644-26D158.37
intestine, neonate N01.CNhs11192.1322-23E942.49
intestine, neonate N06.CNhs11102.688-20B836.44
intestine, neonate N07.CNhs11095.720-20F241.58
intestine, neonate N10.CNhs11098.755-23A533.53
intestine, neonate N20.CNhs11187.827-18D147.64
intestine, neonate N25.CNhs11121.1352-25E349.71
intestine, neonate N30.CNhs11131.1384-42G150.38
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D58.03
kidney, neonate N20.CNhs11113.832-19I115.20
kidney, neonate N25.CNhs11122.1353-25F314.29
kidney, neonate N30.CNhs11203.1385-42H117.28
liver, adult pregnant day01.CNhs10466.508-5B213.93
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B916.23
liver, neonate N20.CNhs11220.823-25A325.51
liver, neonate N25.CNhs11198.1368-26H117.58
liver, neonate N30.CNhs11106.1382-42D129.43
lung, adult.CNhs10474.28-22B122.91
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C69.56
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A414.75
lung, neonate N25.CNhs11119.1359-25C716.58
lung, neonate N30.CNhs11133.1394-42H219.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A146.23
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C215.89
medulla oblongata, neonate N30.CNhs11200.1396-42A316.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I79.65
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G616.33
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E58.68
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I713.38
placenta, adult pregnant day17.CNhs10464.577-18G326.27
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H37.36
skin, neonate N06.CNhs11097.693-20I58.71
skin, neonate N10.CNhs11108.762-6C49.52
small intestine, neonate N16.CNhs11114.790-21I135.85
spinal cord, adult.CNhs10505.24-13C915.76
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H114.08
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C669.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C953.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D373.66
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B811.33
stomach, neonate N07.CNhs11210.718-18A913.64
stomach, neonate N25.CNhs11104.1355-25E418.85
stomach, neonate N30.CNhs11134.1386-42I126.57
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G73.37
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B413.83
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E417.97
uterus, adult pregnant day19.CNhs10497.590-15F513.51
uterus, adult.CNhs10509.92-27E518.86
vagina, adult.CNhs10502.89-27D518.22
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.44
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism1.15e-1151
intestine3.82e-1131
gastrointestinal system4.77e-1047
organ component layer6.41e-0824
endoderm-derived structure7.36e-08118
endoderm7.36e-08118
presumptive endoderm7.36e-08118
mucosa8.95e-0815
digestive system1.98e-07116
digestive tract1.98e-07116
primitive gut1.98e-07116
intestinal mucosa7.97e-0713
wall of intestine7.97e-0713
gastrointestinal system mucosa7.97e-0713
subdivision of digestive tract8.62e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:113588477..113588538,%2B&oldid=4251431"