FFCP PHASE1:Mm9::chr2:27532479..27532509,+: Difference between revisions
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{{FFCP|EntrezGene=20181|HGNC=|MCL_coexpression_id=2752|UniProt=P28700,A2AJP1,Q3UMU4,P28704|association_with_transcript=-211bp_to_ENSMUST00000077257,NM_011305,uc008ixs.1_5end|description=CAGE_peak_3_at_Rxra_5end|id=chr2:27532479..27532509,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!1.35e-12!23;UBERON:0009856!1.35e-12!23;UBERON:0002107!5.14e-12!22;UBERON:0007499!5.14e-12!22;UBERON:0006925!5.14e-12!22;UBERON:0009497!5.14e-12!22;UBERON:0000015!5.14e-12!22;UBERON:0002423!5.14e-12!22;UBERON:0006235!5.14e-12!22;UBERON:0008835!5.14e-12!22;UBERON:0003894!5.14e-12!22;UBERON:0004161!5.14e-12!22;UBERON:0008836!5.14e-12!22;UBERON:0002365!1.53e-10!25;UBERON:0002330!1.53e-10!25;UBERON:0005172!8.89e-08!49;UBERON:0005173!8.89e-08!49;UBERON:0002417!8.89e-08!49;UBERON:0000916!8.89e-08!49;UBERON:0005256!3.79e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.44e-14,23;UBERON:0009856,3.44e-14,23;UBERON:0002107,1.60e-13,22;UBERON:0007499,1.60e-13,22;UBERON:0006925,1.60e-13,22;UBERON:0009497,1.60e-13,22;UBERON:0000015,1.60e-13,22;UBERON:0002423,1.60e-13,22;UBERON:0006235,1.60e-13,22;UBERON:0008835,1.60e-13,22;UBERON:0003894,1.60e-13,22;UBERON:0004161,1.60e-13,22;UBERON:0008836,1.60e-13,22;UBERON:0002365,2.78e-12,25;UBERON:0002330,2.78e-12,25|phase1_expression=3.84357233051505,3.14077866875425,3.63999391511629,5.74682001482977,5.00895729946347,1.17515490338323,0.934450562382103,1.16210991097419,0.563154888606667,0.468129052643987,0.171217968225505,0.398860794976682,0.171200729931206,0,1.99865857089398,0.607425802169478,1.39912375625629,0.473193248037357,0.548457734422955,2.12194825899015,0.340173160604279,0,0,0.639969691173627,1.37645568640302,0.57423196411502,2.15380998079537,1.50829862880122,2.09025761402011,1.51218077855958,0.665191531965914,0,0,0,0,0.498703936075477,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,1.00717454380462,1.21652317463417,0.550640256485045,20.342174953049,0,0.659058548203415,0.388859798148567,1.67983705950435,0,0,0,0.672187598284928,1.28629718017973,1.14613375975503,1.54701627683233,0.202316460859598,0,0.633831403506179,7.11573517345177,5.33576877666684,18.4479442042687,29.6659908770092,24.8668040231135,7.19040265244171,2.68952813725088,0.311068836925433,0.540023753326763,0.210324961351382,0,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.45839474333043,1.17851434189467,0.142371680799103,0.372798891650601,0.075726193333184,0,2.31891590961342,16.3480536626463,6.11974200336975,20.5087212822371,23.3919510281161,19.7131830322828,7.02222100658759,2.89731548382698,2.33807404142582,3.18005617059306,1.83096445709685,0,5.09610479413291,7.11066703153331,0,0.253359865475099,0,8.33542321949138,0.258937883647172,1.48442139064825,1.21439728736295,0.608930956624282,1.61430848079241,0.904335843315735,0.823120949949934,0.879666139307728,0.494389935468748,0.433798070759735,3.5384422077995,1.13236794963186,1.10420759230197,0.484875253135222,7.45567044872489,0.292780797011547,1.25668024088073,1.53274233125155,0.239630249011841,0,0.254140454146129,0.299581278809645,0.915001205637253,0.125654352112864,0.521472960576829,0.255715457330331,0.62336413367868,0.324482526135515,0.81471491080253,0.870848794270651,1.26361379216837,0.210441855886474,1.04096354370163,1.14951052216736,1.62055916824814,0.30140963567143,0.476255494059295,0.896796041993948,0.187403449119458,0.776110112217047,2.37124792226126,3.21480336285293,2.28736461413134,3.94552318369635,4.44875598760957,5.2237824978325,6.58502836505419,0.995171334092466,0,0,0,0.828503090142008,1.64168241986767,0.540186184383045,0.946978942340841,0.983821158737019,0.771335564436891,0.465067889500816,0,0.467061369468678,0.329119699826961,0.656669856316381,0.405344047729279,0.584799949701329,0.219550115291051,1.07365135008297,0,0.823236899034275,3.96502539580558,1.05780226665418,0.639864751605702,1.16118335930219,1.03093969057675,0.80673409849337,0.889512175379481,1.33157938278791,2.84717436926707,1.81168850196412,2.01068167040216,0.596869416123452,1.16978452271472,0,0.648414149624083,1.99141273254367,1.13800740571849,0.342745537829186,1.1270773567308,0.814605311381257,0.969762435838129,0.98190147846446,0.758838445491087,0.590440591918409,0.627994911365499,0.740382983530803,32.3133363524992,1.00107063429656,1.37591296579242,2.69834534861824,3.04290182082754,4.10001171579109,3.8193877767213,8.0554918486227,9.56597837972709,8.78596522201861,37.3797336971122,10.7920874823866,13.7296576170407,15.1547326768267,8.25228102200796,15.9206362049911,0.923765950833023,1.51593129416388,1.30371981153621,1.69745085775188,2.11221223459652,1.50755631697634,0.952174563544055,0.975668239288994,0.630540576424764,0.8858587585951,0.797273843287435,1.80249646187312,0.863424909329478,1.44649058581512,0,1.63171705145613,1.47529281905711,1.37968373152366,0.48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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20181 | |||
|HGNC= | |||
|MCL_coexpression_id=2752 | |||
|TSSclassifier=NA | |||
|UniProt=P28700,A2AJP1,Q3UMU4,P28704 | |||
|association_with_transcript=-211bp_to_ENSMUST00000077257,NM_011305,uc008ixs.1_5end | |||
|cluster_id=chr2:27532479..27532509,+ | |||
|description=CAGE_peak_3_at_Rxra_5end | |||
|id=chr2:27532479..27532509,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.35e-12!23;UBERON:0009856!1.35e-12!23;UBERON:0002107!5.14e-12!22;UBERON:0007499!5.14e-12!22;UBERON:0006925!5.14e-12!22;UBERON:0009497!5.14e-12!22;UBERON:0000015!5.14e-12!22;UBERON:0002423!5.14e-12!22;UBERON:0006235!5.14e-12!22;UBERON:0008835!5.14e-12!22;UBERON:0003894!5.14e-12!22;UBERON:0004161!5.14e-12!22;UBERON:0008836!5.14e-12!22;UBERON:0002365!1.53e-10!25;UBERON:0002330!1.53e-10!25;UBERON:0005172!8.89e-08!49;UBERON:0005173!8.89e-08!49;UBERON:0002417!8.89e-08!49;UBERON:0000916!8.89e-08!49;UBERON:0005256!3.79e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.44e-14,23;UBERON:0009856,3.44e-14,23;UBERON:0002107,1.60e-13,22;UBERON:0007499,1.60e-13,22;UBERON:0006925,1.60e-13,22;UBERON:0009497,1.60e-13,22;UBERON:0000015,1.60e-13,22;UBERON:0002423,1.60e-13,22;UBERON:0006235,1.60e-13,22;UBERON:0008835,1.60e-13,22;UBERON:0003894,1.60e-13,22;UBERON:0004161,1.60e-13,22;UBERON:0008836,1.60e-13,22;UBERON:0002365,2.78e-12,25;UBERON:0002330,2.78e-12,25 | |||
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| |||
|short_description=p3@Rxra | |||
}} |
Latest revision as of 11:42, 26 September 2015
Short description: | p3@Rxra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rxra_5end |
Coexpression cluster: | MCL_coexpression_mm9:2752 |
Association with transcript: | -211bp_to_ENSMUST00000077257, NM_011305, uc008ixs.1_5end |
EntrezGene: | Rxra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.44e-14 | 23 |
sac | 3.44e-14 | 23 |
liver | 1.60e-13 | 22 |
epithelial sac | 1.60e-13 | 22 |
digestive gland | 1.60e-13 | 22 |
epithelium of foregut-midgut junction | 1.60e-13 | 22 |
anatomical boundary | 1.60e-13 | 22 |
hepatobiliary system | 1.60e-13 | 22 |
foregut-midgut junction | 1.60e-13 | 22 |
hepatic diverticulum | 1.60e-13 | 22 |
liver primordium | 1.60e-13 | 22 |
septum transversum | 1.60e-13 | 22 |
liver bud | 1.60e-13 | 22 |
exocrine gland | 2.78e-12 | 25 |
exocrine system | 2.78e-12 | 25 |