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FFCP PHASE1:Mm9::chr6:115201857..115201885,-: Difference between revisions

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{{FFCP|EntrezGene=110595|HGNC=|MCL_coexpression_id=742|UniProt=Q9JHB3,Q3USH7|association_with_transcript=0bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end|description=CAGE_peak_1_at_Timp4_5end|id=chr6:115201857..115201885,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,6.13e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.33e-14!73;UBERON:0005743!3.33e-14!73;UBERON:0000073!6.88e-14!75;UBERON:0001016!6.88e-14!75;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0004121!3.79e-13!102;UBERON:0000924!3.79e-13!102;UBERON:0006601!3.79e-13!102;UBERON:0000955!2.71e-12!50;UBERON:0006238!2.71e-12!50;UBERON:0002616!6.27e-12!49;UBERON:0002020!2.72e-10!34;UBERON:0002346!1.40e-09!71;UBERON:0003075!1.40e-09!71;UBERON:0007284!1.40e-09!71;UBERON:0003076!1.96e-09!12;UBERON:0003057!1.96e-09!12;UBERON:0000033!4.03e-08!63;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29;UBERON:0003080!5.57e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.18e-16,54;UBERON:0001017,5.40e-16,73;UBERON:0001016,4.79e-15,75;UBERON:0001049,8.19e-15,52;UBERON:0005068,8.19e-15,52;UBERON:0006241,8.19e-15,52;UBERON:0007135,8.19e-15,52;UBERON:0004121,9.62e-14,95;UBERON:0000924,9.62e-14,95;UBERON:0006601,9.62e-14,95;UBERON:0010371,2.40e-11,73;UBERON:0003076,2.44e-11,12;UBERON:0003057,2.44e-11,12;UBERON:0000955,3.83e-11,47;UBERON:0006238,3.83e-11,47;UBERON:0002020,5.04e-11,34;UBERON:0002616,9.99e-11,46;UBERON:0002346,3.13e-10,64;UBERON:0003075,3.13e-10,64;UBERON:0007284,3.13e-10,64;UBERON:0010314,1.32e-08,92;UBERON:0003528,1.02e-07,29;UBERON:0002791,1.02e-07,29;UBERON:0001893,1.02e-07,29;UBERON:0003080,5.96e-07,40;UBERON:0002021,6.36e-07,10;UBERON:0000411,6.36e-07,10;UBERON:0001950,6.36e-07,10|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,1.17515490338323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92954546586233,0,0,0.159992422793407,0,1.72269589234506,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.342174953049,28.5612954858385,13.6205433295373,9.91592485278845,10.2190087786515,20.125359011096,0,0,0,0,0.85960031981627,1.54701627683233,5.05791152148994,5.28990979272033,6.33831403506179,1.35537812827653,0.889294796111139,0,0.988866362566974,0,17.3768064100675,23.4373166246148,0.103689612308478,0,0.210324961351382,65.1284244440672,51.462370041726,0.489963196859816,0.287536413054709,0,29.731287869835,24.3882815742709,27.0347498530989,1.05509030184155,1.82975287204819,0.52091337055676,35.4562408731754,30.9519435517424,21.697351184307,32.4091444021034,28.4743361598206,8.38797506213853,0.151452386666368,0.453429360640713,0,0,0,0.539703191637817,0,0,14.6062196937022,0,0,0,0,8.98285341900225,10.1922095882658,0,0,0,0,4.33898742932428,1.8125651855302,2.67195850316685,0.346970653532272,0.608930956624282,0.230615497256059,1.05505848386836,0.587943535678524,2.89033160058254,0.247194967734374,28.6306726701425,7.07688441559899,0.808834249737046,13.6921741445444,7.75800405016355,0,69.3890488917367,106.608373768049,0.510914110417183,0,0,0,25.6141993382247,15.0975198930147,1.7591609295801,11.6462294528825,13.2972037811772,23.4800490352303,18.3332627266566,0.203678727700633,6.96679035416521,1.26361379216837,1.05220927943237,0,0,0,0,0.204109497453984,0,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.617068451549513,0.697601834251224,0,11.4430035519826,0.987359099480883,1.64167464079095,12.9710095273369,16.9591985413385,6.36695334344047,42.6776411657982,14.7202963994889,2.05809224758569,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0.590440591918409,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,1.40814148973101,1.67506257441816,0.952174563544055,3.90267295715598,0.788175720530955,1.10732344824387,0.797273843287435,1.63863314715738,1.72684981865896,2.31438493730419,0,0,12.2941068254759,13.7968373152366,33.7156238974363,36.335622843583,0.819674726883377,45.9497087511959,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0.790575555893047,5.14114106274891,9.22610553853746,0,0.488660878060728,8.24850614862677,1.32745138339963,0,0,0.565815239267694,0,0.307435147943927,0.775284879504663,1.09060118843252,0.356497378384721,1.26414703174326,1.05418608574999,0,1.02131881726136,0.36012218806262,0.129358683782755,0,0,0,0.658196082408484,1.522324745573,0,0,4.19003956304428,12.696241476494,5.32832608096488,1.5078231232039,1.55184047204077,0.820704498725306,0.291480836629851,34.1182555699338,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.418176592028937,1.9652630737156,0.134864346384821,0.0826534557253359,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0,0.258319646955462,0,0,0,0,0.241584120826006,4.89651010638371,1.58005560314089,0.608175645870493,0.205421914329655,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.706765149637033,0.15241361331,0.302478555410522,0.487289403698762,0.384847366561318,0.818138315270983,8.61575457737803,0,0,0,2.12508553435409,0.375364950902364,0.183151624267265,0,2.50786052017682,5.64751842617067,12.4287813856938,8.02053718815155,7.21783365843488,13.0165678756422,12.0863023582352,14.8504950050997,9.45674526770863,9.06284817968409,9.31968561153276,0,0,0.170733605754134,0.243106717068294,1.04806581313991,1.47074806760011,1.33348036680969,1.85431551515005,1.28367683836726,3.03236654116557,3.04175159868288,2.64076877940507,2.34103768674706,2.88113185821912,2.23998328926892,3.33405583898152,2.66533949673168,3.08654752741928,3.70877310722976,2.06078488188156,2.40008476669791,3.01708870470874,4.05341522910446,1.74415699958794,2.72917203204459,1.94613598150856,2.92684756596436,1.57841826862706,2.17286582153379,1.68342681497322,2.37270036248348,1.87158516513571,2.04615521584845,2.63392630016142,1.73615949883027,2.24829520144151,2.10538447600868,4.51229213501426,17.5985265503336,3.97064554415128,4.86922454802885|short_description=p1@Timp4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110595
|HGNC=
|MCL_coexpression_id=742
|TSSclassifier=NA
|UniProt=Q9JHB3,Q3USH7
|association_with_transcript=0bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end
|cluster_id=chr6:115201857..115201885,-
|description=CAGE_peak_1_at_Timp4_5end
|id=chr6:115201857..115201885,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,6.13e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.33e-14!73;UBERON:0005743!3.33e-14!73;UBERON:0000073!6.88e-14!75;UBERON:0001016!6.88e-14!75;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0004121!3.79e-13!102;UBERON:0000924!3.79e-13!102;UBERON:0006601!3.79e-13!102;UBERON:0000955!2.71e-12!50;UBERON:0006238!2.71e-12!50;UBERON:0002616!6.27e-12!49;UBERON:0002020!2.72e-10!34;UBERON:0002346!1.40e-09!71;UBERON:0003075!1.40e-09!71;UBERON:0007284!1.40e-09!71;UBERON:0003076!1.96e-09!12;UBERON:0003057!1.96e-09!12;UBERON:0000033!4.03e-08!63;UBERON:0002791!1.70e-07!29;UBERON:0003528!1.70e-07!29;UBERON:0001893!1.70e-07!29;UBERON:0003080!5.57e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.18e-16,54;UBERON:0001017,5.40e-16,73;UBERON:0001016,4.79e-15,75;UBERON:0001049,8.19e-15,52;UBERON:0005068,8.19e-15,52;UBERON:0006241,8.19e-15,52;UBERON:0007135,8.19e-15,52;UBERON:0004121,9.62e-14,95;UBERON:0000924,9.62e-14,95;UBERON:0006601,9.62e-14,95;UBERON:0010371,2.40e-11,73;UBERON:0003076,2.44e-11,12;UBERON:0003057,2.44e-11,12;UBERON:0000955,3.83e-11,47;UBERON:0006238,3.83e-11,47;UBERON:0002020,5.04e-11,34;UBERON:0002616,9.99e-11,46;UBERON:0002346,3.13e-10,64;UBERON:0003075,3.13e-10,64;UBERON:0007284,3.13e-10,64;UBERON:0010314,1.32e-08,92;UBERON:0003528,1.02e-07,29;UBERON:0002791,1.02e-07,29;UBERON:0001893,1.02e-07,29;UBERON:0003080,5.96e-07,40;UBERON:0002021,6.36e-07,10;UBERON:0000411,6.36e-07,10;UBERON:0001950,6.36e-07,10
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,1.17515490338323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92954546586233,0,0,0.159992422793407,0,1.72269589234506,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.342174953049,28.5612954858385,13.6205433295373,9.91592485278845,10.2190087786515,20.125359011096,0,0,0,0,0.85960031981627,1.54701627683233,5.05791152148994,5.28990979272033,6.33831403506179,1.35537812827653,0.889294796111139,0,0.988866362566974,0,17.3768064100675,23.4373166246148,0.103689612308478,0,0.210324961351382,65.1284244440672,51.462370041726,0.489963196859816,0.287536413054709,0,29.731287869835,24.3882815742709,27.0347498530989,1.05509030184155,1.82975287204819,0.52091337055676,35.4562408731754,30.9519435517424,21.697351184307,32.4091444021034,28.4743361598206,8.38797506213853,0.151452386666368,0.453429360640713,0,0,0,0.539703191637817,0,0,14.6062196937022,0,0,0,0,8.98285341900225,10.1922095882658,0,0,0,0,4.33898742932428,1.8125651855302,2.67195850316685,0.346970653532272,0.608930956624282,0.230615497256059,1.05505848386836,0.587943535678524,2.89033160058254,0.247194967734374,28.6306726701425,7.07688441559899,0.808834249737046,13.6921741445444,7.75800405016355,0,69.3890488917367,106.608373768049,0.510914110417183,0,0,0,25.6141993382247,15.0975198930147,1.7591609295801,11.6462294528825,13.2972037811772,23.4800490352303,18.3332627266566,0.203678727700633,6.96679035416521,1.26361379216837,1.05220927943237,0,0,0,0,0.204109497453984,0,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.617068451549513,0.697601834251224,0,11.4430035519826,0.987359099480883,1.64167464079095,12.9710095273369,16.9591985413385,6.36695334344047,42.6776411657982,14.7202963994889,2.05809224758569,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0.590440591918409,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,1.40814148973101,1.67506257441816,0.952174563544055,3.90267295715598,0.788175720530955,1.10732344824387,0.797273843287435,1.63863314715738,1.72684981865896,2.31438493730419,0,0,12.2941068254759,13.7968373152366,33.7156238974363,36.335622843583,0.819674726883377,45.9497087511959,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0.790575555893047,5.14114106274891,9.22610553853746,0,0.488660878060728,8.24850614862677,1.32745138339963,0,0,0.565815239267694,0,0.307435147943927,0.775284879504663,1.09060118843252,0.356497378384721,1.26414703174326,1.05418608574999,0,1.02131881726136,0.36012218806262,0.129358683782755,0,0,0,0.658196082408484,1.522324745573,0,0,4.19003956304428,12.696241476494,5.32832608096488,1.5078231232039,1.55184047204077,0.820704498725306,0.291480836629851,34.1182555699338,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.418176592028937,1.9652630737156,0.134864346384821,0.0826534557253359,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0,0.258319646955462,0,0,0,0,0.241584120826006,4.89651010638371,1.58005560314089,0.608175645870493,0.205421914329655,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.706765149637033,0.15241361331,0.302478555410522,0.487289403698762,0.384847366561318,0.818138315270983,8.61575457737803,0,0,0,2.12508553435409,0.375364950902364,0.183151624267265,0,2.50786052017682,5.64751842617067,12.4287813856938,8.02053718815155,7.21783365843488,13.0165678756422,12.0863023582352,14.8504950050997,9.45674526770863,9.06284817968409,9.31968561153276,0,0,0.170733605754134,0.243106717068294,1.04806581313991,1.47074806760011,1.33348036680969,1.85431551515005,1.28367683836726,3.03236654116557,3.04175159868288,2.64076877940507,2.34103768674706,2.88113185821912,2.23998328926892,3.33405583898152,2.66533949673168,3.08654752741928,3.70877310722976,2.06078488188156,2.40008476669791,3.01708870470874,4.05341522910446,1.74415699958794,2.72917203204459,1.94613598150856,2.92684756596436,1.57841826862706,2.17286582153379,1.68342681497322,2.37270036248348,1.87158516513571,2.04615521584845,2.63392630016142,1.73615949883027,2.24829520144151,2.10538447600868,4.51229213501426,17.5985265503336,3.97064554415128,4.86922454802885
|short_description=p1@Timp4
}}

Latest revision as of 11:53, 26 September 2015

Short description:p1@Timp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Timp4_5end
Coexpression cluster:MCL_coexpression_mm9:742
Association with transcript: 0bp_to_ENSMUST00000032462, NM_080639, uc009dip.1, uc009diq.1_5end
EntrezGene:Timp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Timp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C228.56
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.62
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C817.38
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F165.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E435.46
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H128.63
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B269.39
cerebellum, neonate N30.CNhs11135.1395-42I2106.61
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A425.61
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F223.48
diencephalon, neonate N30.CNhs11201.1388-42B218.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G112.97
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D242.68
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C233.72
medulla oblongata, neonate N30.CNhs11200.1396-42A336.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C245.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C312.70
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C934.12
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C617.60
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell6.13e-078

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.18e-1654
central nervous system5.40e-1673
nervous system4.79e-1575
neural tube8.19e-1552
neural rod8.19e-1552
future spinal cord8.19e-1552
neural keel8.19e-1552
ectoderm-derived structure9.62e-1495
ectoderm9.62e-1495
presumptive ectoderm9.62e-1495
ecto-epithelium2.40e-1173
posterior neural tube2.44e-1112
chordal neural plate2.44e-1112
brain3.83e-1147
future brain3.83e-1147
gray matter5.04e-1134
regional part of brain9.99e-1146
neurectoderm3.13e-1064
neural plate3.13e-1064
presumptive neural plate3.13e-1064
structure with developmental contribution from neural crest1.32e-0892
brain grey matter1.02e-0729
regional part of telencephalon1.02e-0729
telencephalon1.02e-0729
anterior neural tube5.96e-0740
occipital lobe6.36e-0710
visual cortex6.36e-0710
neocortex6.36e-0710
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