FFCP PHASE1:Mm9::chr17:43938819..43938831,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53901 | |EntrezGene=53901 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8VIP4,Q9JHG2,Q543P2 | |UniProt=Q8VIP4,Q9JHG2,Q543P2 | ||
|association_with_transcript=19bp_to_ENSMUST00000044895,NM_207649,uc008cpo.1_5end | |association_with_transcript=19bp_to_ENSMUST00000044895,NM_207649,uc008cpo.1_5end | ||
|cluster_id=chr17:43938819..43938831,+ | |||
|description=CAGE_peak_6_at_Rcan2_5end | |description=CAGE_peak_6_at_Rcan2_5end | ||
|id=chr17:43938819..43938831,+ | |id=chr17:43938819..43938831,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.00e-11!114;UBERON:0007100!2.26e-10!18;UBERON:0000948!2.26e-10!18;UBERON:0005498!2.26e-10!18;UBERON:0004140!2.26e-10!18;UBERON:0009881!2.26e-10!18;UBERON:0004141!2.26e-10!18;UBERON:0003084!2.26e-10!18;UBERON:0007005!2.26e-10!18;UBERON:0004139!2.26e-10!18;UBERON:0004291!2.26e-10!18;UBERON:0004111!3.03e-10!122;UBERON:0003103!2.61e-09!43;UBERON:0001017!2.78e-09!73;UBERON:0005743!2.78e-09!73;UBERON:0000955!1.10e-08!50;UBERON:0006238!1.10e-08!50;UBERON:0001049!1.23e-08!52;UBERON:0005068!1.23e-08!52;UBERON:0006241!1.23e-08!52;UBERON:0007135!1.23e-08!52;UBERON:0004535!1.78e-08!23;UBERON:0001009!1.78e-08!23;UBERON:0000073!1.80e-08!75;UBERON:0001016!1.80e-08!75;UBERON:0002616!3.48e-08!49;UBERON:0002346!2.03e-07!71;UBERON:0003075!2.03e-07!71;UBERON:0007284!2.03e-07!71;UBERON:0000033!3.64e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.19e-18,18;UBERON:0000948,2.19e-18,18;UBERON:0005498,2.19e-18,18;UBERON:0004140,2.19e-18,18;UBERON:0009881,2.19e-18,18;UBERON:0004141,2.19e-18,18;UBERON:0003084,2.19e-18,18;UBERON:0007005,2.19e-18,18;UBERON:0004139,2.19e-18,18;UBERON:0004291,2.19e-18,18;UBERON:0010314,7.13e-18,92;UBERON:0004535,9.82e-16,23;UBERON:0001009,9.82e-16,23;UBERON:0000025,1.06e-11,114;UBERON:0004111,2.77e-11,122;UBERON:0001017,2.22e-10,73;UBERON:0000073,6.15e-10,54;UBERON:0001016,6.36e-10,75;UBERON:0003103,9.92e-10,43;UBERON:0004872,1.00e-09,33;UBERON:0004121,9.95e-09,95;UBERON:0000924,9.95e-09,95;UBERON:0006601,9.95e-09,95;UBERON:0000955,1.60e-08,47;UBERON:0006238,1.60e-08,47;UBERON:0001049,3.87e-08,52;UBERON:0005068,3.87e-08,52;UBERON:0006241,3.87e-08,52;UBERON:0007135,3.87e-08,52;UBERON:0002616,1.17e-07,46;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.45062890951116,1.5378032791413,2.91644848611425,0.279972843250725,0,0,0,0,0,0.85960031981627,0.515672092277442,1.82084814773638,3.1739458756322,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,0.103689612308478,0,0.210324961351382,0.571301968807607,1.54607978666129,0,0.0958454710182364,0,4.40463523997555,2.68143409978894,3.07213066512487,0.527545150920775,0.548925861614458,1.04182674111352,3.07101298901519,0.56276261003168,2.90316670775939,0.883885756421003,0.427115042397309,0.931997229126503,0,0,0.869593466105033,0.860423876981386,0.679971333707751,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.125666591329675,0,3.7595832799177,0.884610551949874,0.485300549842228,0.441683036920787,0,0,0.292780797011547,0.41889341362691,0,0,0,0,4.04434726393021,4.11750542536764,0.251308704225729,0.695297280769106,2.30143911597297,2.28566849015516,1.1356888414743,0.203678727700633,0.870848794270651,0,1.89397670297827,0,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0.281105173679186,1.03481348295606,0.215567992932842,0,0,0,0,0,0,0,0,0,0,1.86413195281952,2.81431271977315,0.900310307305074,1.42046841351126,2.36117078096885,4.16521204795921,4.88321283975857,5.36546802799238,7.12268588439734,5.9241545968853,6.56669856316381,10.701082860053,10.2339991197733,9.44065495751518,14.091673969839,0.420579897128254,0,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.841629838683823,1.20149420536089,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,1.47802552133284,0,0,0,0.469380496577004,0.502518772325447,0.714130922658041,0,0.472905432318573,0.44292937929755,0.637819074629948,0.491589944147214,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,3.05046120976805,1.99259867206745,0,2.01976741763498,0.315508219416257,0.780877488593277,0,0,0,0,0.404810701674894,0,0,3.53453448063988,0.141940085208269,0.178065603667255,0.325773918707152,0,0,1.45668381692989,1.209294227859,0.943025398779491,1.18120757152309,0.614870295887855,0.258428293168221,0,0.712994756769443,0.948110273807448,0,1.03135543248187,1.36175842301515,0,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,2.22510362412612,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.826534557253359,1.04702376793612,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0.469428954583016,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.596044064343795,0,0,0,0,0,0,0,0,4.0811469050738,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0.564751842617067,0.920650473014354,0,1.20297227640581,2.05524755931193,5.2877572817279,2.02506750069542,0.900642406448441,0.453142408984205,2.5888015587591,0,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.576226371643824,0.34461281373368,0,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.676916863133412,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0,0.233931608445408,0.644613162144895,0.956441660344217,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.45062890951116,1.5378032791413,2.91644848611425,0.279972843250725,0,0,0,0,0,0.85960031981627,0.515672092277442,1.82084814773638,3.1739458756322,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,0.103689612308478,0,0.210324961351382,0.571301968807607,1.54607978666129,0,0.0958454710182364,0,4.40463523997555,2.68143409978894,3.07213066512487,0.527545150920775,0.548925861614458,1.04182674111352,3.07101298901519,0.56276261003168,2.90316670775939,0.883885756421003,0.427115042397309,0.931997229126503,0,0,0.869593466105033,0.860423876981386,0.679971333707751,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.125666591329675,0,3.7595832799177,0.884610551949874,0.485300549842228,0.441683036920787,0,0,0.292780797011547,0.41889341362691,0,0,0,0,4.04434726393021,4.11750542536764,0.251308704225729,0.695297280769106,2.30143911597297,2.28566849015516,1.1356888414743,0.203678727700633,0.870848794270651,0,1.89397670297827,0,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0.281105173679186,1.03481348295606,0.215567992932842,0,0,0,0,0,0,0,0,0,0,1.86413195281952,2.81431271977315,0.900310307305074,1.42046841351126,2.36117078096885,4.16521204795921,4.88321283975857,5.36546802799238,7.12268588439734,5.9241545968853,6.56669856316381,10.701082860053,10.2339991197733,9.44065495751518,14.091673969839,0.420579897128254,0,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.841629838683823,1.20149420536089,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,1.47802552133284,0,0,0,0.469380496577004,0.502518772325447,0.714130922658041,0,0.472905432318573,0.44292937929755,0.637819074629948,0.491589944147214,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,3.05046120976805,1.99259867206745,0,2.01976741763498,0.315508219416257,0.780877488593277,0,0,0,0,0.404810701674894,0,0,3.53453448063988,0.141940085208269,0.178065603667255,0.325773918707152,0,0,1.45668381692989,1.209294227859,0.943025398779491,1.18120757152309,0.614870295887855,0.258428293168221,0,0.712994756769443,0.948110273807448,0,1.03135543248187,1.36175842301515,0,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,2.22510362412612,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.826534557253359,1.04702376793612,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0.469428954583016,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.596044064343795,0,0,0,0,0,0,0,0,4.0811469050738,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0.564751842617067,0.920650473014354,0,1.20297227640581,2.05524755931193,5.2877572817279,2.02506750069542,0.900642406448441,0.453142408984205,2.5888015587591,0,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.576226371643824,0.34461281373368,0,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.676916863133412,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0,0.233931608445408,0.644613162144895,0.956441660344217,0.441182838239031,0.463735671240843 | ||
|short_description=p6@Rcan2 | |short_description=p6@Rcan2 | ||
}} | }} |
Latest revision as of 12:30, 26 September 2015
Short description: | p6@Rcan2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rcan2_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000044895, NM_207649, uc008cpo.1_5end |
EntrezGene: | Rcan2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.19e-18 | 18 |
heart | 2.19e-18 | 18 |
primitive heart tube | 2.19e-18 | 18 |
primary heart field | 2.19e-18 | 18 |
anterior lateral plate mesoderm | 2.19e-18 | 18 |
heart tube | 2.19e-18 | 18 |
heart primordium | 2.19e-18 | 18 |
cardiac mesoderm | 2.19e-18 | 18 |
cardiogenic plate | 2.19e-18 | 18 |
heart rudiment | 2.19e-18 | 18 |
structure with developmental contribution from neural crest | 7.13e-18 | 92 |
cardiovascular system | 9.82e-16 | 23 |
circulatory system | 9.82e-16 | 23 |
tube | 1.06e-11 | 114 |
anatomical conduit | 2.77e-11 | 122 |
central nervous system | 2.22e-10 | 73 |
regional part of nervous system | 6.15e-10 | 54 |
nervous system | 6.36e-10 | 75 |
compound organ | 9.92e-10 | 43 |
splanchnic layer of lateral plate mesoderm | 1.00e-09 | 33 |
ectoderm-derived structure | 9.95e-09 | 95 |
ectoderm | 9.95e-09 | 95 |
presumptive ectoderm | 9.95e-09 | 95 |
brain | 1.60e-08 | 47 |
future brain | 1.60e-08 | 47 |
neural tube | 3.87e-08 | 52 |
neural rod | 3.87e-08 | 52 |
future spinal cord | 3.87e-08 | 52 |
neural keel | 3.87e-08 | 52 |
regional part of brain | 1.17e-07 | 46 |
neurectoderm | 2.95e-07 | 64 |
neural plate | 2.95e-07 | 64 |
presumptive neural plate | 2.95e-07 | 64 |