FFCP PHASE1:Mm9::chr2:30271029..30271080,-: Difference between revisions
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{{FFCP|EntrezGene=12908|HGNC=|MCL_coexpression_id=35|UniProt=B7ZDD8,D6REV7|association_with_transcript=0bp_to_ENSMUST00000102854,ENSMUST00000134120,ENSMUST00000156702_5end|description=CAGE_peak_1_at_Crat_5end|id=chr2:30271029..30271080,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.75e-09!18;UBERON:0000948!9.75e-09!18;UBERON:0005498!9.75e-09!18;UBERON:0004140!9.75e-09!18;UBERON:0009881!9.75e-09!18;UBERON:0004141!9.75e-09!18;UBERON:0003084!9.75e-09!18;UBERON:0007005!9.75e-09!18;UBERON:0004139!9.75e-09!18;UBERON:0004291!9.75e-09!18;UBERON:0004535!2.69e-07!23;UBERON:0001009!2.69e-07!23;UBERON:0004872!5.34e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.75e-09,18;UBERON:0000948,9.75e-09,18;UBERON:0005498,9.75e-09,18;UBERON:0004140,9.75e-09,18;UBERON:0009881,9.75e-09,18;UBERON:0004141,9.75e-09,18;UBERON:0003084,9.75e-09,18;UBERON:0007005,9.75e-09,18;UBERON:0004139,9.75e-09,18;UBERON:0004291,9.75e-09,18;UBERON:0004535,2.69e-07,23;UBERON:0001009,2.69e-07,23;UBERON:0004872,5.34e-07,33|phase1_expression=9.60893082628764,38.7362702479691,41.4049307844478,15.1232105653415,24.0429950374247,14.7733759282463,13.0823078733494,1.16210991097419,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.699363219351979,31.645427372488,21.6648536107114,44.7719602002014,3.78554598429885,7.12995054749842,5.51706547337439,34.7827056717875,4.26951090163807,1.82839852397255,23.0389088822506,18.5821517664408,44.7900932009716,37.0455316696804,27.149375318422,18.4322716872683,21.926621289114,12.6386391073524,5.71527606113668,9.22597181376855,0,6.06588401477677,5.81821258754723,3.47087905646027,20.5080499061085,19.533383613095,24.6056159667685,21.1763335691165,23.2235464885872,24.7610280045888,14.4781340671914,18.1464706882931,14.3166466686112,38.3371758730539,66.9337230087971,56.0199765972903,45.1077365852338,39.4761708983522,60.3760770332881,4.53013036355888,1.45072428402269,0.672187598284928,24.439646423415,31.5186783932632,22.17389996793,8.6996078169627,6.34789175126439,4.43681982454325,29.4794742900145,26.6788438833342,38.2457379844595,38.565788140112,38.3659262070894,38.9480143673926,44.5693234173003,15.8645106831971,11.6105106965254,11.567872874326,14.8538511889978,15.0190607847097,8.32937434661688,8.81778333367775,7.35375029288017,7.70811166995721,17.3654779795855,15.8214729253931,8.04506355154182,8.96578907303615,9.89735404057844,16.7509799400829,6.75315132038016,15.4326230254578,15.0260578591571,13.9524247183121,11.7431650869939,17.1141196932996,29.0950506411124,8.11620568364698,6.88339101585109,0.679971333707751,0,1.29955283489534,0.896053774194671,80.6150971556256,22.6672329028817,13.2490862347463,19.0803370235584,12.3942209403479,15.3991772897181,5.09610479413291,0,5.41227602528035,4.56047757855178,4.54972000513305,23.6360631018454,14.7594593678888,16.92240385339,10.5826049327343,18.2679286987285,14.7593918243877,11.1534754008941,17.1679512418129,27.2696503185396,20.2699873542187,61.0209286202027,66.3457913962406,120.192769510925,97.8327926779543,75.1556642359594,18.6391761218122,16.6885054296582,13.4045892360611,34.997616563577,1.7972268675888,1.19980546198682,3.04968544975355,15.2786452192919,11.4375150704657,3.01570445070875,14.2535942557667,9.2057564638919,13.0906468072523,10.5456820994042,12.5262417535889,47.7722767142757,11.8779696463827,73.4442077043794,11.7108398666433,8.27647575960503,14.5850325142333,12.3577950625286,12.5867523429957,13.3238269096244,13.3993466120412,39.0642089815914,10.7783996466421,10.4008344092301,11.0849208223288,10.7405908889512,9.17555922444473,23.6811473235073,17.6972637310831,8.7575077400137,1.40442637462647,4.88961023517959,3.12579849335152,25.0622184767957,24.6252362980151,29.7102401410675,39.5363708427301,56.8648629749997,60.9355095905144,96.5015870714193,108.650727566846,104.504981418617,190.889425899637,167.122478432519,214.427001248788,212.867181691284,182.885246037445,175.273582901046,15.9820360908737,8.95270127699774,45.5977920517641,30.147364599644,8.74481827194459,7.19933682767359,11.2114691350221,17.9498336914775,18.6797556829691,20.1639163679313,25.6245693234036,36.2337700392824,28.1495433856302,38.3985991039421,34.5086434200843,27.8634016682809,23.342909386467,23.299528970761,10.4317345524195,10.967857210534,12.3978509240388,13.2373363099454,14.7403890247396,19.7783012090698,28.7726243915371,38.969079066615,42.8606527006953,48.3716882573458,3.55743152504579,18.0192714173382,17.4937505650751,23.6105218004096,22.5174734741238,26.2883104130134,21.8978232532021,24.4541716833189,16.0513874507285,12.0807021802756,14.3768206527355,10.7920874823866,11.8574315783533,6.56705082662491,9.86685774370517,3.37710464954357,21.4313700593261,8.33762211790133,8.47417877498535,11.712410918488,15.2548661387526,27.4710262204578,37.8489389008762,31.2213836572478,29.7930422360701,22.1464689648775,28.5424035896902,23.43245400435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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12908 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=B7ZDD8,D6REV7 | |||
|association_with_transcript=0bp_to_ENSMUST00000102854,ENSMUST00000134120,ENSMUST00000156702_5end | |||
|cluster_id=chr2:30271029..30271080,- | |||
|description=CAGE_peak_1_at_Crat_5end | |||
|id=chr2:30271029..30271080,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.75e-09!18;UBERON:0000948!9.75e-09!18;UBERON:0005498!9.75e-09!18;UBERON:0004140!9.75e-09!18;UBERON:0009881!9.75e-09!18;UBERON:0004141!9.75e-09!18;UBERON:0003084!9.75e-09!18;UBERON:0007005!9.75e-09!18;UBERON:0004139!9.75e-09!18;UBERON:0004291!9.75e-09!18;UBERON:0004535!2.69e-07!23;UBERON:0001009!2.69e-07!23;UBERON:0004872!5.34e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.75e-09,18;UBERON:0000948,9.75e-09,18;UBERON:0005498,9.75e-09,18;UBERON:0004140,9.75e-09,18;UBERON:0009881,9.75e-09,18;UBERON:0004141,9.75e-09,18;UBERON:0003084,9.75e-09,18;UBERON:0007005,9.75e-09,18;UBERON:0004139,9.75e-09,18;UBERON:0004291,9.75e-09,18;UBERON:0004535,2.69e-07,23;UBERON:0001009,2.69e-07,23;UBERON:0004872,5.34e-07,33 | |||
|phase1_expression=9.60893082628764,38.7362702479691,41.4049307844478,15.1232105653415,24.0429950374247,14.7733759282463,13.0823078733494,1.16210991097419,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.699363219351979,31.645427372488,21.6648536107114,44.7719602002014,3.78554598429885,7.12995054749842,5.51706547337439,34.7827056717875,4.26951090163807,1.82839852397255,23.0389088822506,18.5821517664408,44.7900932009716,37.0455316696804,27.149375318422,18.4322716872683,21.926621289114,12.6386391073524,5.71527606113668,9.22597181376855,0,6.06588401477677,5.81821258754723,3.47087905646027,20.5080499061085,19.533383613095,24.6056159667685,21.1763335691165,23.2235464885872,24.7610280045888,14.4781340671914,18.1464706882931,14.3166466686112,38.3371758730539,66.9337230087971,56.0199765972903,45.1077365852338,39.4761708983522,60.3760770332881,4.53013036355888,1.45072428402269,0.672187598284928,24.439646423415,31.5186783932632,22.17389996793,8.6996078169627,6.34789175126439,4.43681982454325,29.4794742900145,26.6788438833342,38.2457379844595,38.565788140112,38.3659262070894,38.9480143673926,44.5693234173003,15.8645106831971,11.6105106965254,11.567872874326,14.8538511889978,15.0190607847097,8.32937434661688,8.81778333367775,7.35375029288017,7.70811166995721,17.3654779795855,15.8214729253931,8.04506355154182,8.96578907303615,9.89735404057844,16.7509799400829,6.75315132038016,15.4326230254578,15.0260578591571,13.9524247183121,11.7431650869939,17.1141196932996,29.0950506411124,8.11620568364698,6.88339101585109,0.679971333707751,0,1.29955283489534,0.896053774194671,80.6150971556256,22.6672329028817,13.2490862347463,19.0803370235584,12.3942209403479,15.3991772897181,5.09610479413291,0,5.41227602528035,4.56047757855178,4.54972000513305,23.6360631018454,14.7594593678888,16.92240385339,10.5826049327343,18.2679286987285,14.7593918243877,11.1534754008941,17.1679512418129,27.2696503185396,20.2699873542187,61.0209286202027,66.3457913962406,120.192769510925,97.8327926779543,75.1556642359594,18.6391761218122,16.6885054296582,13.4045892360611,34.997616563577,1.7972268675888,1.19980546198682,3.04968544975355,15.2786452192919,11.4375150704657,3.01570445070875,14.2535942557667,9.2057564638919,13.0906468072523,10.5456820994042,12.5262417535889,47.7722767142757,11.8779696463827,73.4442077043794,11.7108398666433,8.27647575960503,14.5850325142333,12.3577950625286,12.5867523429957,13.3238269096244,13.3993466120412,39.0642089815914,10.7783996466421,10.4008344092301,11.0849208223288,10.7405908889512,9.17555922444473,23.6811473235073,17.6972637310831,8.7575077400137,1.40442637462647,4.88961023517959,3.12579849335152,25.0622184767957,24.6252362980151,29.7102401410675,39.5363708427301,56.8648629749997,60.9355095905144,96.5015870714193,108.650727566846,104.504981418617,190.889425899637,167.122478432519,214.427001248788,212.867181691284,182.885246037445,175.273582901046,15.9820360908737,8.95270127699774,45.5977920517641,30.147364599644,8.74481827194459,7.19933682767359,11.2114691350221,17.9498336914775,18.6797556829691,20.1639163679313,25.6245693234036,36.2337700392824,28.1495433856302,38.3985991039421,34.5086434200843,27.8634016682809,23.342909386467,23.299528970761,10.4317345524195,10.967857210534,12.3978509240388,13.2373363099454,14.7403890247396,19.7783012090698,28.7726243915371,38.969079066615,42.8606527006953,48.3716882573458,3.55743152504579,18.0192714173382,17.4937505650751,23.6105218004096,22.5174734741238,26.2883104130134,21.8978232532021,24.4541716833189,16.0513874507285,12.0807021802756,14.3768206527355,10.7920874823866,11.8574315783533,6.56705082662491,9.86685774370517,3.37710464954357,21.4313700593261,8.33762211790133,8.47417877498535,11.712410918488,15.2548661387526,27.4710262204578,37.8489389008762,31.2213836572478,29.7930422360701,22.1464689648775,28.5424035896902,23.4324540043505,24.3485824430913,27.6279701890687,39.2057338242108,19.5806046174735,18.6870423747234,17.1080782708934,15.7339578188036,11.8383803458125,15.0820149746541,231.51584024641,19.8770178232242,14.8366722832723,18.7418356027535,17.9226598464414,21.3886727119098,20.9476632783736,19.02610297872,14.9050487534769,16.9973744517005,12.2102100240287,16.890870139784,16.025904330053,15.3113741792362,18.6416238958965,17.2568679841952,8.01176099311439,5.13950046840077,11.8821200246216,21.5570381802964,18.1386737286917,24.550687850981,15.6319503675327,19.9638531895444,13.9056173491759,22.1379078007497,22.6898195146011,12.5962654128902,10.443543453816,14.1000965323202,11.574199891706,9.93105308396732,15.3397183137781,12.176627524557,14.0053876592716,9.38686832254841,9.53244318887191,7.05690873775878,38.7482694412478,24.2196640043858,26.8392515930294,22.6807453605959,17.5630762727216,30.0225261728746,17.8008289930089,32.8072091131877,17.1301100409475,17.4082855727529,37.1085860299241,43.0586817321229,37.0620640594567,2.88963330989554,2.37917468950219,2.9021994498929,46.7788602827406,6.64305586520384,11.7925290933572,11.5565714679327,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| |||
|short_description=p1@Crat | |||
}} |
Latest revision as of 13:05, 26 September 2015
Short description: | p1@Crat |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Crat_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000102854, ENSMUST00000134120, ENSMUST00000156702_5end |
EntrezGene: | Crat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.75e-09 | 18 |
heart | 9.75e-09 | 18 |
primitive heart tube | 9.75e-09 | 18 |
primary heart field | 9.75e-09 | 18 |
anterior lateral plate mesoderm | 9.75e-09 | 18 |
heart tube | 9.75e-09 | 18 |
heart primordium | 9.75e-09 | 18 |
cardiac mesoderm | 9.75e-09 | 18 |
cardiogenic plate | 9.75e-09 | 18 |
heart rudiment | 9.75e-09 | 18 |
cardiovascular system | 2.69e-07 | 23 |
circulatory system | 2.69e-07 | 23 |
splanchnic layer of lateral plate mesoderm | 5.34e-07 | 33 |