FFCP PHASE1:Mm9::chr2:30271154..30271228,-: Difference between revisions
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{{FFCP|EntrezGene=12908|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=-34bp_to_ENSMUST00000128593_5end|description=CAGE_peak_5_at_Crat_5end|id=chr2:30271154..30271228,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.92e-07!52;UBERON:0005068!4.92e-07!52;UBERON:0006241!4.92e-07!52;UBERON:0007135!4.92e-07!52;UBERON:0000955!5.49e-07!50;UBERON:0006238!5.49e-07!50;UBERON:0002616!8.98e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.79e-09,92;UBERON:0007100,1.83e-07,18;UBERON:0000948,1.83e-07,18;UBERON:0005498,1.83e-07,18;UBERON:0004140,1.83e-07,18;UBERON:0009881,1.83e-07,18;UBERON:0004141,1.83e-07,18;UBERON:0003084,1.83e-07,18;UBERON:0007005,1.83e-07,18;UBERON:0004139,1.83e-07,18;UBERON:0004291,1.83e-07,18|phase1_expression=0.480446541314382,1.04692622291808,1.81999695755814,3.62957053568196,1.00179145989269,0.503637815735669,0.467225281191051,0.903863264091034,0.985521055061667,0.936258105287974,0.34243593645101,0.0797721589953364,0.171200729931206,0.786783621770977,0.999329285446988,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0,123.312770719051,0,0.783599367416806,0.799962113967033,0.91763712426868,2.29692785646008,0.86152399231815,0.861884930743556,1.52018735565099,1.51218077855958,0,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,1.17646297606203,1.36609096991689,0.485510353031154,0.251793635951155,0.405507724878058,0.183546752161682,0.782391344348039,1.09012578190223,0.659058548203415,0.194429899074283,0.279972843250725,1.43752564364972,0.503347818173209,0,0.336093799142464,0,0,0,1.61853168687678,1.5869729378161,2.53532561402472,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,2.07379224616955,1.4850653216486,0.630974884054146,0.856952953211411,1.10434270475807,0.857435594504678,1.15014565221884,1.83843757322004,1.10115880999389,0.766124028511126,1.0752457327937,1.45074916503213,1.28082701043374,2.6045668527838,1.3959149950069,0.56276261003168,1.22238598221448,0.589257170947335,1.13897344639282,1.3047961207771,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,15.870219474888,0.340860645156116,0.779358013808606,0.35333957451034,0.563373679106722,0,2.54805239706646,0,0.216491041011214,0,0,22.0374887857786,0,1.33597925158342,1.21439728736295,0.304465478312141,0.461230994512117,0.452167921657868,1.29347577849275,2.26199864393416,0.247194967734374,2.60278842455841,0.884610551949874,5.01477234836968,3.5334642953663,1.45462575940567,3.72783522436244,5.85561594023094,3.14170060220183,2.29911349687732,0.359445373517761,0,0.381210681219194,3.59497534571574,6.40500843946077,2.89005009859588,3.12883776346098,4.60287823194595,4.1557608911912,2.43361894601636,0.509196819251581,1.11966273549084,3.0326731012041,6.52369753248069,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.95251098811859,1.0249097622788,1.40552586839593,3.10444044886819,0,0,1.05570674498369,0,0.278047249225598,2.43776516565517,1.02891068203972,0.199034266818493,0,0.257347907114715,0.284163499395593,2.07125772535502,1.17263029990548,3.78130329068131,5.20838418287463,3.73852040320067,3.85667782218446,6.51095045301142,7.24338183778972,4.67061369468678,8.06343264576054,4.59668899421467,5.43161023957233,6.14039947186396,3.95190207523891,2.41571553768669,2.3131894342054,1.85228302282712,2.31293148088659,1.05780226665418,0.213288250535234,0.464473343720877,0,0.403367049246685,0.444756087689741,1.52180500890047,2.37264530772256,1.97638745668813,0.754005626400808,1.98956472041151,1.9496408711912,1.79763881730844,1.08069024937347,0.597423819763102,0,0.685491075658373,0,0,0.775809948670503,1.1221731182451,1.51767689098217,1.77132177575523,1.41298855057237,0.987177311374404,0,0.83422552858047,0,0.674586337154561,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,0,0.744281895337007,0.624075346229121,0.505157755894224,0,0,1.84753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0.952174563544055,2.34160377429359,0.630540576424764,0.664394068946325,0.797273843287435,0.655453258862952,0.518054945597687,0.867894351489069,1.50791283939272,0.54390568381871,0,1.10374698521893,2.56880943980467,2.57865710502847,0,3.7870639080656,0.315508219416257,0.390438744296638,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,1.92792789853084,0.851640511249612,0.178065603667255,0.977321756121456,0.989820737835213,0,0.242780636154981,0,0.754420319023592,1.18120757152309,0.614870295887855,1.55056975900933,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,0,0.680879211507576,0.720244376125241,0.905510786479282,1.28602221018955,0.886701168211368,0.535106452806212,0.329098041204242,3.04464949114599,0,0,0.882113592219848,2.96795255294664,1.29171541356724,1.3268843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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12908 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENSMUST00000128593_5end | |||
|cluster_id=chr2:30271154..30271228,- | |||
|description=CAGE_peak_5_at_Crat_5end | |||
|id=chr2:30271154..30271228,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.92e-07!52;UBERON:0005068!4.92e-07!52;UBERON:0006241!4.92e-07!52;UBERON:0007135!4.92e-07!52;UBERON:0000955!5.49e-07!50;UBERON:0006238!5.49e-07!50;UBERON:0002616!8.98e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.79e-09,92;UBERON:0007100,1.83e-07,18;UBERON:0000948,1.83e-07,18;UBERON:0005498,1.83e-07,18;UBERON:0004140,1.83e-07,18;UBERON:0009881,1.83e-07,18;UBERON:0004141,1.83e-07,18;UBERON:0003084,1.83e-07,18;UBERON:0007005,1.83e-07,18;UBERON:0004139,1.83e-07,18;UBERON:0004291,1.83e-07,18 | |||
|phase1_expression=0.480446541314382,1.04692622291808,1.81999695755814,3.62957053568196,1.00179145989269,0.503637815735669,0.467225281191051,0.903863264091034,0.985521055061667,0.936258105287974,0.34243593645101,0.0797721589953364,0.171200729931206,0.786783621770977,0.999329285446988,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0,123.312770719051,0,0.783599367416806,0.799962113967033,0.91763712426868,2.29692785646008,0.86152399231815,0.861884930743556,1.52018735565099,1.51218077855958,0,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,1.17646297606203,1.36609096991689,0.485510353031154,0.251793635951155,0.405507724878058,0.183546752161682,0.782391344348039,1.09012578190223,0.659058548203415,0.194429899074283,0.279972843250725,1.43752564364972,0.503347818173209,0,0.336093799142464,0,0,0,1.61853168687678,1.5869729378161,2.53532561402472,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,2.07379224616955,1.4850653216486,0.630974884054146,0.856952953211411,1.10434270475807,0.857435594504678,1.15014565221884,1.83843757322004,1.10115880999389,0.766124028511126,1.0752457327937,1.45074916503213,1.28082701043374,2.6045668527838,1.3959149950069,0.56276261003168,1.22238598221448,0.589257170947335,1.13897344639282,1.3047961207771,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,15.870219474888,0.340860645156116,0.779358013808606,0.35333957451034,0.563373679106722,0,2.54805239706646,0,0.216491041011214,0,0,22.0374887857786,0,1.33597925158342,1.21439728736295,0.304465478312141,0.461230994512117,0.452167921657868,1.29347577849275,2.26199864393416,0.247194967734374,2.60278842455841,0.884610551949874,5.01477234836968,3.5334642953663,1.45462575940567,3.72783522436244,5.85561594023094,3.14170060220183,2.29911349687732,0.359445373517761,0,0.381210681219194,3.59497534571574,6.40500843946077,2.89005009859588,3.12883776346098,4.60287823194595,4.1557608911912,2.43361894601636,0.509196819251581,1.11966273549084,3.0326731012041,6.52369753248069,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.95251098811859,1.0249097622788,1.40552586839593,3.10444044886819,0,0,1.05570674498369,0,0.278047249225598,2.43776516565517,1.02891068203972,0.199034266818493,0,0.257347907114715,0.284163499395593,2.07125772535502,1.17263029990548,3.78130329068131,5.20838418287463,3.73852040320067,3.85667782218446,6.51095045301142,7.24338183778972,4.67061369468678,8.06343264576054,4.59668899421467,5.43161023957233,6.14039947186396,3.95190207523891,2.41571553768669,2.3131894342054,1.85228302282712,2.31293148088659,1.05780226665418,0.213288250535234,0.464473343720877,0,0.403367049246685,0.444756087689741,1.52180500890047,2.37264530772256,1.97638745668813,0.754005626400808,1.98956472041151,1.9496408711912,1.79763881730844,1.08069024937347,0.597423819763102,0,0.685491075658373,0,0,0.775809948670503,1.1221731182451,1.51767689098217,1.77132177575523,1.41298855057237,0.987177311374404,0,0.83422552858047,0,0.674586337154561,0,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,0,0.744281895337007,0.624075346229121,0.505157755894224,0,0,1.84753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0.952174563544055,2.34160377429359,0.630540576424764,0.664394068946325,0.797273843287435,0.655453258862952,0.518054945597687,0.867894351489069,1.50791283939272,0.54390568381871,0,1.10374698521893,2.56880943980467,2.57865710502847,0,3.7870639080656,0.315508219416257,0.390438744296638,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,1.92792789853084,0.851640511249612,0.178065603667255,0.977321756121456,0.989820737835213,0,0.242780636154981,0,0.754420319023592,1.18120757152309,0.614870295887855,1.55056975900933,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,0,0.680879211507576,0.720244376125241,0.905510786479282,1.28602221018955,0.886701168211368,0.535106452806212,0.329098041204242,3.04464949114599,0,0,0.882113592219848,2.96795255294664,1.29171541356724,1.32688434841943,1.55184047204077,1.31312719796049,1.7488850197791,2.59595422814714,0.512612642393558,0,0.185194527369712,0.941842285023455,0.27338845544205,0,0.339956859987711,0.419854356970974,0.276399947608848,1.90934123603023,0,0,0.324016022465404,0.627264888043406,0.87345025498471,0.674321731924103,1.23980183588004,2.09404753587224,1.03691978633434,1.24267862617385,1167.40807601496,0,0.165458490457098,0.388902376688095,0.645799117388655,0.168956125490778,1.05621514781179,0.911430693907651,0.524296722128554,268.399958237693,413.323058980037,1.26404448251271,0.202725215290164,0.410843828659309,0.25984164595559,0.716106782669926,1.19208812868759,0.721172697119813,0.443068581523732,0.504832249740738,0.838274873204998,1.51239277705261,0.974578807397524,1.34696578296461,1.40252282617883,2.26730383615211,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.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| |||
|short_description=p5@Crat | |||
}} |
Latest revision as of 13:06, 26 September 2015
Short description: | p5@Crat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Crat_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -34bp_to_ENSMUST00000128593_5end |
EntrezGene: | Crat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.79e-09 | 92 |
primary circulatory organ | 1.83e-07 | 18 |
heart | 1.83e-07 | 18 |
primitive heart tube | 1.83e-07 | 18 |
primary heart field | 1.83e-07 | 18 |
anterior lateral plate mesoderm | 1.83e-07 | 18 |
heart tube | 1.83e-07 | 18 |
heart primordium | 1.83e-07 | 18 |
cardiac mesoderm | 1.83e-07 | 18 |
cardiogenic plate | 1.83e-07 | 18 |
heart rudiment | 1.83e-07 | 18 |