FFCP PHASE1:Mm9::chr17:46298023..46298034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56055 | |EntrezGene=56055 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=E9QA45 | |UniProt=E9QA45 | ||
|association_with_transcript=8bp_to_ENSMUST00000172170_5end | |association_with_transcript=8bp_to_ENSMUST00000172170_5end | ||
|cluster_id=chr17:46298023..46298034,+ | |||
|description=CAGE_peak_4_at_Gtpbp2_5end | |description=CAGE_peak_4_at_Gtpbp2_5end | ||
|id=chr17:46298023..46298034,+ | |id=chr17:46298023..46298034,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.79e-09,6;CL:0000677,2.79e-09,6;CL:0000584,2.79e-09,6;CL:0000075,9.29e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.86e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.64e-12,15;UBERON:0004923,1.32e-11,24;UBERON:0000160,3.83e-11,31;UBERON:0005409,1.97e-10,47;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0001007,5.98e-08,116;UBERON:0001555,5.98e-08,116;UBERON:0007026,5.98e-08,116;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118;UBERON:0004921,6.49e-07,114 | |||
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| ||
|short_description=p4@Gtpbp2 | |short_description=p4@Gtpbp2 | ||
}} | }} |
Latest revision as of 13:24, 26 September 2015
Short description: | p4@Gtpbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gtpbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 8bp_to_ENSMUST00000172170_5end |
EntrezGene: | Gtpbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.79e-09 | 6 |
gut absorptive cell | 2.79e-09 | 6 |
enterocyte | 2.79e-09 | 6 |
columnar/cuboidal epithelial cell | 9.29e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.64e-12 | 15 |
organ component layer | 1.32e-11 | 24 |
intestine | 3.83e-11 | 31 |
gastrointestinal system | 1.97e-10 | 47 |
intestinal mucosa | 1.17e-09 | 13 |
wall of intestine | 1.17e-09 | 13 |
gastrointestinal system mucosa | 1.17e-09 | 13 |
digestive system | 5.98e-08 | 116 |
digestive tract | 5.98e-08 | 116 |
primitive gut | 5.98e-08 | 116 |
endoderm-derived structure | 1.25e-07 | 118 |
endoderm | 1.25e-07 | 118 |
presumptive endoderm | 1.25e-07 | 118 |
subdivision of digestive tract | 6.49e-07 | 114 |