FFCP PHASE1:Mm9::chr6:121306807..121306834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14411 | |EntrezGene=14411 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENSMUST00000171874_5end | |association_with_transcript=-3bp_to_ENSMUST00000171874_5end | ||
|cluster_id=chr6:121306807..121306834,+ | |||
|description=CAGE_peak_3_at_Slc6a12_5end | |description=CAGE_peak_3_at_Slc6a12_5end | ||
|id=chr6:121306807..121306834,+ | |id=chr6:121306807..121306834,+ | ||
|ontology_enrichment_celltype=CL:0000325!2.71e-08!2;CL:0000217!2.71e-08!2;CL:0000328!2.71e-08!2;CL:0002573!2.71e-08!2;CL:0002376!2.71e-08!2;CL:0000218!2.71e-08!2;CL:0000692!2.71e-08!2;CL:0002377!2.71e-08!2;CL:0002375!2.71e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,7.56e-10,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.80e-13!3;UBERON:0000478!1.80e-13!3;UBERON:0000158!1.80e-13!3;UBERON:0005795!2.82e-10!4;UBERON:0000995!2.82e-10!4;UBERON:0001987!1.37e-09!2;UBERON:0003124!1.37e-09!2;UBERON:0004340!1.37e-09!2;UBERON:0003975!2.66e-08!5;UBERON:0004175!1.64e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.10e-52,3;UBERON:0000478,1.10e-52,3;UBERON:0000158,1.10e-52,3;UBERON:0005795,4.62e-40,4;UBERON:0000995,4.62e-40,4;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0003975,2.89e-32,5;UBERON:0003134,1.53e-20,8;UBERON:0006834,7.74e-19,1;UBERON:0000305,1.74e-18,1;UBERON:0004175,2.30e-18,9;UBERON:0000474,2.30e-18,9;UBERON:0003100,3.43e-15,11;UBERON:0003133,2.18e-07,24;UBERON:0004923,2.41e-07,24;UBERON:0004871,4.77e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,8.89901883843746,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,99.2661325109495,36.0114520468494,0.441056796109924,0.8244312647074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.2285569765159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,8.89901883843746,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,99.2661325109495,36.0114520468494,0.441056796109924,0.8244312647074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.2285569765159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Slc6a12 | |short_description=p3@Slc6a12 | ||
}} | }} |
Latest revision as of 14:17, 26 September 2015
Short description: | p3@Slc6a12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc6a12_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | -3bp_to_ENSMUST00000171874_5end |
EntrezGene: | Slc6a12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 7.56e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.10e-52 | 3 |
extraembryonic structure | 1.10e-52 | 3 |
membranous layer | 1.10e-52 | 3 |
embryonic uterus | 4.62e-40 | 4 |
uterus | 4.62e-40 | 4 |
placenta | 6.35e-36 | 2 |
chorion | 6.35e-36 | 2 |
allantois | 6.35e-36 | 2 |
internal female genitalia | 2.89e-32 | 5 |
female reproductive organ | 1.53e-20 | 8 |
uterus or analog | 7.74e-19 | 1 |
amnion | 1.74e-18 | 1 |
internal genitalia | 2.30e-18 | 9 |
female reproductive system | 2.30e-18 | 9 |
female organism | 3.43e-15 | 11 |
reproductive organ | 2.18e-07 | 24 |
organ component layer | 2.41e-07 | 24 |
somatic layer of lateral plate mesoderm | 4.77e-07 | 3 |
reproductive structure | 7.12e-07 | 26 |
reproductive system | 7.12e-07 | 26 |