FFCP PHASE1:Mm9::chr10:94038999..94039015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319880 | |EntrezGene=319880 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2608 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R310 | |UniProt=Q8R310 | ||
|association_with_transcript=0bp_to_ENSMUST00000117929,NM_177026,uc007gvu.2_5end | |association_with_transcript=0bp_to_ENSMUST00000117929,NM_177026,uc007gvu.2_5end | ||
|cluster_id=chr10:94038999..94039015,+ | |||
|description=CAGE_peak_2_at_Tmcc3_5end | |description=CAGE_peak_2_at_Tmcc3_5end | ||
|id=chr10:94038999..94039015,+ | |id=chr10:94038999..94039015,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.57e-07!9;CL:0002251!1.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.26e-15,9;CL:0002251,7.26e-15,9;CL:0000066,2.50e-11,25;CL:0000239,4.51e-11,6;CL:0000677,4.51e-11,6;CL:0000584,4.51e-11,6;CL:0000075,2.40e-09,7;CL:0000223,1.27e-08,20;CL:0002076,4.14e-08,15;CL:0000682,6.98e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.17e-12!15;UBERON:0001242!2.68e-10!13;UBERON:0000060!2.68e-10!13;UBERON:0001262!2.68e-10!13;UBERON:0004786!2.68e-10!13;UBERON:0004923!1.09e-07!24;UBERON:0003350!1.57e-07!9;UBERON:0004808!1.57e-07!9;UBERON:0001277!1.57e-07!9;UBERON:0000160!5.39e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-24,15;UBERON:0000160,4.97e-22,31;UBERON:0001242,5.03e-21,13;UBERON:0001262,5.03e-21,13;UBERON:0004786,5.03e-21,13;UBERON:0005409,2.29e-15,47;UBERON:0004923,2.50e-15,24;UBERON:0003350,7.26e-15,9;UBERON:0004808,7.26e-15,9;UBERON:0001277,7.26e-15,9;UBERON:0000485,8.70e-12,11;UBERON:0000014,2.34e-07,5;UBERON:0001003,2.34e-07,5;UBERON:0002097,2.34e-07,5;UBERON:0002199,2.34e-07,5;UBERON:0007029,2.34e-07,5;UBERON:0007376,2.34e-07,5;UBERON:0002416,2.34e-07,5;UBERON:0007383,2.34e-07,5;UBERON:0002108,2.91e-07,4;UBERON:0004119,6.74e-07,118;UBERON:0000925,6.74e-07,118;UBERON:0006595,6.74e-07,118 | |||
|phase1_expression=0.320297694209588,12.563114675017,10.0099832665698,8.46899791659124,10.5188103288733,10.7442734023609,15.4184342793047,0,0,0,0,0,0,0,0.333109761815663,0,2.09868563438444,0,0,0.42438965179803,1.53077922271926,0,0,9.91953021319121,14.6821939882989,28.137366241636,32.3071497119306,32.967098600941,8.55105387553682,9.32511480111744,23.9468951507729,0,0,0,6.06588401477677,3.15845826181135,2.85837098767317,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,1.28629718017973,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,20.2905142091174,0.860423876981386,4.75979933595425,0,0,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,2.8545969929765,0.258937883647172,0.445326417194474,0.173485326766136,0,0,0.150722640552623,1.52865319276416,0.125666591329675,0.247194967734374,1.15679485535929,0,0.161766849947409,0.220841518460394,0,7.45567044872489,0.292780797011547,0.83778682725382,10.2182822083437,0,0,0,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0.648965052271031,0.101839363850316,0.373220911830279,0,101.643416393167,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.281105173679186,28.9747775227698,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.700592054203017,0.329119699826961,0.32833492815819,0.243206428637567,0.584799949701329,0.219550115291051,0.939444931322602,0,0,5.28670052774077,0.793351699990633,0,0,0,0,0,0.380451252225118,1.89811624617805,0.658795818896044,3.51869292320377,3.78017296878187,5.65395852645448,0.898819408654221,6.91641759599022,12.1476176685164,0,0,0,0,0,0,0,0,0,0.370191491765402,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,4.05338066937588,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0,0.491589944147214,0.345369963731791,1.15719246865209,0,0,0.491764273019036,5.24279817978992,0,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,3.29940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0.632073515871632,0,0,3.40439605753788,0,0.129358683782755,0,0,0.178368817602071,0,6.08929898229199,0.469343416127421,1.0591603543191,0,1.48397627647332,8.39615018818709,1.14594557363496,2.38744688006273,1.96969079694074,1.1659233465194,0.18542530201051,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0.436725127492355,0.674321731924103,1.40510874733071,0.26175594198403,33.181433162699,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0.632022241256357,0,0,0,0,0,0.120195449519969,0.443068581523732,0,0.15241361331,0,0.38983152295901,0.192423683280659,0.233753804363138,0.226730383615211,0,0,0,0.772758376128762,0,13.0037653229758,1.92931541171159,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,1.01391719956096,0,0.561849044819294,0.320125762024346,0.0574354689556133,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0.619747364743864,0.385813221962283,0,0.701794825336225,1.71896843238639,3.25190164517034,0.882365676478062,0 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|phase1_expression=0.320297694209588,12.563114675017,10.0099832665698,8.46899791659124,10.5188103288733,10.7442734023609,15.4184342793047,0,0,0,0,0,0,0,0.333109761815663,0,2.09868563438444,0,0,0.42438965179803,1.53077922271926,0,0,9.91953021319121,14.6821939882989,28.137366241636,32.3071497119306,32.967098600941,8.55105387553682,9.32511480111744,23.9468951507729,0,0,0,6.06588401477677,3.15845826181135,2.85837098767317,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,1.28629718017973,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,20.2905142091174,0.860423876981386,4.75979933595425,0,0,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,2.8545969929765,0.258937883647172,0.445326417194474,0.173485326766136,0,0,0.150722640552623,1.52865319276416,0.125666591329675,0.247194967734374,1.15679485535929,0,0.161766849947409,0.220841518460394,0,7.45567044872489,0.292780797011547,0.83778682725382,10.2182822083437,0,0,0,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0.648965052271031,0.101839363850316,0.373220911830279,0,101.643416393167,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.281105173679186,28.9747775227698,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.700592054203017,0.329119699826961,0.32833492815819,0.243206428637567,0.584799949701329,0.219550115291051,0.939444931322602,0,0,5.28670052774077,0.793351699990633,0,0,0,0,0,0.380451252225118,1.89811624617805,0.658795818896044,3.51869292320377,3.78017296878187,5.65395852645448,0.898819408654221,6.91641759599022,12.1476176685164,0,0,0,0,0,0,0,0,0,0.370191491765402,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,4.05338066937588,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0,0.491589944147214,0.345369963731791,1.15719246865209,0,0,0.491764273019036,5.24279817978992,0,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,3.29940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0.632073515871632,0,0,3.40439605753788,0,0.129358683782755,0,0,0.178368817602071,0,6.08929898229199,0.469343416127421,1.0591603543191,0,1.48397627647332,8.39615018818709,1.14594557363496,2.38744688006273,1.96969079694074,1.1659233465194,0.18542530201051,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0.436725127492355,0.674321731924103,1.40510874733071,0.26175594198403,33.181433162699,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0.632022241256357,0,0,0,0,0,0.120195449519969,0.443068581523732,0,0.15241361331,0,0.38983152295901,0.192423683280659,0.233753804363138,0.226730383615211,0,0,0,0.772758376128762,0,13.0037653229758,1.92931541171159,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,1.01391719956096,0,0.561849044819294,0.320125762024346,0.0574354689556133,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0.619747364743864,0.385813221962283,0,0.701794825336225,1.71896843238639,3.25190164517034,0.882365676478062,0 | ||
|short_description=p2@Tmcc3 | |short_description=p2@Tmcc3 | ||
}} | }} |
Latest revision as of 14:48, 26 September 2015
Short description: | p2@Tmcc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmcc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2608 |
Association with transcript: | 0bp_to_ENSMUST00000117929, NM_177026, uc007gvu.2_5end |
EntrezGene: | Tmcc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.26e-15 | 9 |
epithelial cell of alimentary canal | 7.26e-15 | 9 |
epithelial cell | 2.50e-11 | 25 |
brush border epithelial cell | 4.51e-11 | 6 |
gut absorptive cell | 4.51e-11 | 6 |
enterocyte | 4.51e-11 | 6 |
columnar/cuboidal epithelial cell | 2.40e-09 | 7 |
endodermal cell | 1.27e-08 | 20 |
endo-epithelial cell | 4.14e-08 | 15 |
M cell of gut | 6.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.69e-24 | 15 |
intestine | 4.97e-22 | 31 |
intestinal mucosa | 5.03e-21 | 13 |
wall of intestine | 5.03e-21 | 13 |
gastrointestinal system mucosa | 5.03e-21 | 13 |
gastrointestinal system | 2.29e-15 | 47 |
organ component layer | 2.50e-15 | 24 |
epithelium of mucosa | 7.26e-15 | 9 |
gastrointestinal system epithelium | 7.26e-15 | 9 |
intestinal epithelium | 7.26e-15 | 9 |
simple columnar epithelium | 8.70e-12 | 11 |
zone of skin | 2.34e-07 | 5 |
skin epidermis | 2.34e-07 | 5 |
skin of body | 2.34e-07 | 5 |
integument | 2.34e-07 | 5 |
surface | 2.34e-07 | 5 |
outer epithelium | 2.34e-07 | 5 |
integumental system | 2.34e-07 | 5 |
enveloping layer of ectoderm | 2.34e-07 | 5 |
small intestine | 2.91e-07 | 4 |
endoderm-derived structure | 6.74e-07 | 118 |
endoderm | 6.74e-07 | 118 |
presumptive endoderm | 6.74e-07 | 118 |