FFCP PHASE1:Mm9::chr15:103140879..103140907,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80910 | |EntrezGene=80910 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CIM5 | |UniProt=Q8CIM5 | ||
|association_with_transcript=-10bp_to_ENSMUST00000079824,NM_030720,uc007xxy.1_5end | |association_with_transcript=-10bp_to_ENSMUST00000079824,NM_030720,uc007xxy.1_5end | ||
|cluster_id=chr15:103140879..103140907,- | |||
|description=CAGE_peak_1_at_Gpr84_5end | |description=CAGE_peak_1_at_Gpr84_5end | ||
|id=chr15:103140879..103140907,- | |id=chr15:103140879..103140907,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.61e-15,7;CL:0002092,2.89e-10,3;CL:0002540,2.89e-10,3;CL:0000682,4.01e-09,3;CL:0002194,1.52e-07,4;CL:0000766,1.52e-07,4;CL:0000234,1.52e-07,4;CL:0000576,1.52e-07,4;CL:0000235,1.52e-07,4;CL:0000864,1.52e-07,4;CL:0002009,1.52e-07,4;CL:0000040,1.52e-07,4;CL:0000559,1.52e-07,4;CL:0000557,3.75e-07,7;CL:0000878,4.31e-07,2;CL:0000129,4.31e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.34e-10,3;DOID:4045,2.34e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.22e-10,32;UBERON:0002371,1.11e-08,16;UBERON:0001474,8.03e-08,22;UBERON:0004765,8.03e-08,22;UBERON:0001434,8.03e-08,22 | |||
|phase1_expression=0.160148847104794,3.14077866875425,2.27499619694768,0,0,0,1.63528848416868,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0.0992909512008853,0.261199789138935,1.11994695955385,0.22940928106717,2.29692785646008,1.29228598847722,1.72376986148711,0,0,0,0,0,0,0,0,0,28.4601508901097,20.3147189576188,30.3643771504803,28.2351114254887,29.3709558532132,31.558172947025,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,21.1476433561129,28.6771245144423,23.4458437932213,3.59520132622086,4.61061966385865,0.103689612308478,0,0,0,0.441737081903227,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.510749352340751,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.969750506270444,0,0,0,0,0.838705871541442,1.79970819298022,0.508280908292259,0.449371918214468,0,0,1.39059456153821,1.02286182932132,0.41557608911912,0.162241263067758,0,1.49288364732112,0.505445516867349,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.205782136407943,0,2.1066395619397,0.772043721344145,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0.470996183524124,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.72353147925725,1.01850340712568,0.863088412352432,0.810676133875177,0,0,1.86070473834252,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,23.3879444042045,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0.370850604021019,0.854354403989263,0.619160603889667,0.740778109478847,0.941842285023455,0.410082683163076,0.228778173206523,1.18984900995699,0.419854356970974,1.10559979043539,0.954670618015114,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0.564751842617067,0,0,0.859265911718438,0,0,0,0.900642406448441,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | |phase1_expression=0.160148847104794,3.14077866875425,2.27499619694768,0,0,0,1.63528848416868,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0.0992909512008853,0.261199789138935,1.11994695955385,0.22940928106717,2.29692785646008,1.29228598847722,1.72376986148711,0,0,0,0,0,0,0,0,0,28.4601508901097,20.3147189576188,30.3643771504803,28.2351114254887,29.3709558532132,31.558172947025,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,21.1476433561129,28.6771245144423,23.4458437932213,3.59520132622086,4.61061966385865,0.103689612308478,0,0,0,0.441737081903227,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.510749352340751,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.969750506270444,0,0,0,0,0.838705871541442,1.79970819298022,0.508280908292259,0.449371918214468,0,0,1.39059456153821,1.02286182932132,0.41557608911912,0.162241263067758,0,1.49288364732112,0.505445516867349,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.205782136407943,0,2.1066395619397,0.772043721344145,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0.470996183524124,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.72353147925725,1.01850340712568,0.863088412352432,0.810676133875177,0,0,1.86070473834252,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,23.3879444042045,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0.370850604021019,0.854354403989263,0.619160603889667,0.740778109478847,0.941842285023455,0.410082683163076,0.228778173206523,1.18984900995699,0.419854356970974,1.10559979043539,0.954670618015114,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0.564751842617067,0,0,0.859265911718438,0,0,0,0.900642406448441,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | ||
|short_description=p1@Gpr84 | |short_description=p1@Gpr84 | ||
}} | }} |
Latest revision as of 15:01, 26 September 2015
Short description: | p1@Gpr84 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr84_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -10bp_to_ENSMUST00000079824, NM_030720, uc007xxy.1_5end |
EntrezGene: | Gpr84 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.61e-15 | 7 |
bone marrow cell | 2.89e-10 | 3 |
mesenchymal stem cell of the bone marrow | 2.89e-10 | 3 |
M cell of gut | 4.01e-09 | 3 |
monopoietic cell | 1.52e-07 | 4 |
myeloid leukocyte | 1.52e-07 | 4 |
phagocyte | 1.52e-07 | 4 |
monocyte | 1.52e-07 | 4 |
macrophage | 1.52e-07 | 4 |
tissue-resident macrophage | 1.52e-07 | 4 |
macrophage dendritic cell progenitor | 1.52e-07 | 4 |
monoblast | 1.52e-07 | 4 |
promonocyte | 1.52e-07 | 4 |
granulocyte monocyte progenitor cell | 3.75e-07 | 7 |
central nervous system macrophage | 4.31e-07 | 2 |
microglial cell | 4.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.22e-10 | 32 |
bone marrow | 1.11e-08 | 16 |
bone element | 8.03e-08 | 22 |
skeletal element | 8.03e-08 | 22 |
skeletal system | 8.03e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.34e-10 | 3 |
muscle cancer | 2.34e-10 | 3 |