FFCP PHASE1:Mm9::chr12:4599798..4599893,+: Difference between revisions
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{{FFCP|EntrezGene=20403|HGNC=|MCL_coexpression_id=317|UniProt=B2RR82,E9QNG1,Q3V3Y8,Q8CD59,Q3TQ85|association_with_transcript=0bp_to_ENSMUST00000020972,ENSMUST00000062580,ENSMUST00000164218,NM_001198968,NM_001198969,NM_011365,uc007mxv.2,uc007mxw.2,uc007mxx.1_5end|description=CAGE_peak_1_at_Itsn2_5end|id=chr12:4599798..4599893,+|ontology_enrichment_celltype=CL:0000838!3.31e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,3.31e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.92e-11!130;UBERON:0000925!3.92e-11!130;UBERON:0006595!3.92e-11!130;UBERON:0001007!1.72e-10!128;UBERON:0001555!1.72e-10!128;UBERON:0007026!1.72e-10!128;UBERON:0004921!4.61e-10!126;UBERON:0004185!4.61e-10!126;UBERON:0005911!2.90e-08!69;UBERON:0000077!9.72e-08!97;UBERON:0001004!1.41e-07!42;UBERON:0000065!2.92e-07!41;UBERON:0007023!2.99e-07!51;UBERON:0004177!3.67e-07!29;UBERON:0003929!9.22e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.44e-12,118;UBERON:0000925,5.44e-12,118;UBERON:0006595,5.44e-12,118;UBERON:0001007,2.53e-11,116;UBERON:0001555,2.53e-11,116;UBERON:0007026,2.53e-11,116;UBERON:0004921,6.98e-11,114;UBERON:0000077,4.82e-09,35;UBERON:0005911,2.90e-08,69;UBERON:0001004,1.41e-07,42;UBERON:0001041,2.10e-07,80;UBERON:0000065,2.92e-07,41;UBERON:0007023,2.99e-07,51;UBERON:0004177,3.67e-07,29;UBERON:0005057,3.67e-07,29;UBERON:0003929,9.22e-07,55|phase1_expression=16.6554800988986,58.976843891052,77.3498706962211,74.708660192787,96.672875879645,54.3928840994523,49.2922671656559,115.565374480211,99.3968378390767,113.755359792489,41.7771842470232,41.8006113135563,107.171656936935,109.974866243099,47.9678057014554,56.4905996017614,29.3815988813822,164.355788151642,166.594036830973,162.541236638646,29.1698485218169,44.0851823331931,39.1799683708403,38.2381890476242,39.2289870624861,43.0673973086265,43.5069616120666,46.541786260152,25.8431850460668,34.2760976473506,25.9424697466706,12.065582795733,12.916360539276,0,25.7077941578634,16.4572298904907,27.7670324516822,139.789564666127,82.040211174999,97.8989401231003,157.646038792312,181.007053513988,143.711064497221,20.7729749659703,21.7960402121956,16.3356609423897,3.9119567217402,6.75877984779384,4.61340983742391,7.19390626574849,6.01941612989059,0,146.306432482346,96.4731648875088,98.8115769478844,21.0952737549477,26.3610764743656,21.6582278756526,6.06949382578793,4.7609188134483,6.33831403506179,7.45457970552091,1.77858959222228,17.997994345628,21.7550599764734,25.5772841380596,12.2836045312546,10.373894243682,6.63613518774257,5.13022565660425,7.57169860864975,11.9973413449598,9.49734726091938,6.00204916153275,4.12135525378416,6.43453150627015,24.2254938198655,23.8775322219301,20.8904885228491,7.12185953743047,4.84884511092771,6.77187381723788,18.4260779340911,21.3849791812038,27.1980881042722,15.6153150301044,13.9524247183121,9.31997229126503,36.5000251865947,37.332350692752,78.5532764381547,48.1837371109576,17.6792546764015,20.5087212822371,33.1385972898311,34.4980703064948,29.2124393874044,15.6795896771813,11.950156211732,9.54016851177919,20.281452447842,20.5322363862909,33.1246811618639,35.5533351576666,27.277871167413,34.4569417046134,32.3535644809461,36.6530253898183,139.826457169473,31.9150598989373,17.6955033301459,16.7456013071678,17.5267777914604,21.8547828801303,26.2222816912622,26.8926505445506,40.7871696761717,43.2352077190536,66.3457913962406,29.9268672402707,49.4685001351282,47.0328995541165,44.7340226923493,16.6885054296582,14.2423760633149,38.8294723917059,38.7002852154123,20.3966928537759,29.9885735892433,26.0635712564392,38.4300506367646,9.67538511269056,40.3272422846081,28.3844157636667,25.7657175253855,21.7403292510795,19.7568365869614,41.8007421249913,35.3811861807145,54.9253243863697,11.3204785377552,11.2652031172402,11.884100567153,17.1803492332715,17.2132342852859,19.601399203582,18.9277483610652,41.9099460597205,6.03590380211958,13.0483195315795,17.7710635405588,14.6861140726475,24.190110682627,28.5566776548177,36.217656007798,14.927570011387,21.066395619397,17.2423097766859,29.8371674365372,20.5054514810147,19.7001890384121,19.6267646992506,24.1479630296914,20.8570085652248,26.8424776424038,26.9739375910473,27.9004337455604,28.3739781952222,24.1902979372816,34.6393349206891,42.3179185829367,35.6727969317811,41.7145219052996,42.946054003319,41.2168299185689,12.7601719350313,51.8757489284563,32.5274196996159,17.0630600428187,19.2756437644164,25.1291549578082,29.2441110703847,27.3524993929191,28.5338439168839,36.5387377389274,27.0106285747378,38.7056221552415,31.634079054543,37.4331047268711,37.7504151634773,39.1209870273197,37.438559371821,8.34538764193559,18.6225075553858,19.1603150644237,22.6052973908299,26.7654432291324,28.405007055579,41.4199318163885,40.1499602504518,44.7446374347918,38.37651797968,30.5346205899763,28.8642032888843,24.5698743891504,26.3088671490279,23.5317740810663,29.6647906495473,30.5551022137704,33.6604480817448,30.9678283140318,29.3780712111247,28.7536413054709,37.2140947668503,36.5084077544036,37.3816739361725,25.2950353065896,34.7359335381624,68.9129399321435,14.9698215298683,18.2520773615069,18.3324692637203,20.4180516010997,36.6838703797576,38.5630698235342,45.2710063030093,45.2412863584768,42.9641497918623,53.4173475002582,73.4107649926506,55.7772491426843,60.7526046042349,25.6345182696763,36.9855864996723,39.8329061145419,39.183017975272,33.3945227174607,31.0610969469338,12.4590558486273,26.5094473564592,18.9304931649754,18.350620981942,20.4652227846159,24.3748173911603,24.9534514972281,26.6091938941502,21.4549671887694,30.3946092227764,21.7408277870588,29.8828824272281,35.6269613872754,14.6013795007149,19.220661203722,37.7781581607106,43.8058956521877,13.595715624679,14.2092071773433,18.8605079755898,11.2214719294694,21.5204603560749,28.6855405416725,30.5368332761105,23.8853243517763,41.0847785316561,49.5467460302494,57.7559042189846,35.0652793926402,16.9257428389432,5.95049945400671,13.9319072770535,21.9901889716419,20.334045206636,20.5686275752651,10.9607381681256,46.6996699046784,43.8492386688108,37.7103560673985,56.0613260001032,36.0065671531869,46.2600134198955,55.6275123054616,61.2245556049078,48.6772997171851,35.9725085900389,65.6144182263754,22.7025554759545,33.5202094539178,42.5712712830602,59.872071741809,65.659335710272,57.7926661979108,51.7820373597535,59.7023886835111,26.7307773044232,13.1279437336171,21.9585024496997,22.2491002092911,24.0451540416639,25.3300573945566,34.9298657136686,36.1195601519718,40.5721710075246,35.644117655243,45.3577698553456,8.45539408026285,16.2973035187937,11.913011312911,17.1117045742762,11.7535439364735,16.5577002980963,15.3737982625938,23.8274024264429,33.7647089050789,20.2930661493845,19.298010419277,70.1544687794556,13.9880398550213,19.2069489898227,31.4408391606264,31.5086984374767,43.3125353423157,47.2368116613478,47.4083382230393,44.3242715272368,46.1051180262749,52.5304424562939,74.4578208851708,66.001323365266,70.2430182111229,42.6253121196597,15.7610026895586,16.776491185972,20.9855770455098,39.9902459646634,41.6655095501624,35.897718356384,45.660464743841,36.1131914905462,22.0253218620656,29.4608151364593,27.498984645091,31.9646919159259,34.2541259885321,27.9495742034189,33.7511250115903,24.3173449741079,33.0793958558469,26.9235362110946,7.16132698330819,15.5619700626402,14.8538237006097,24.3106717068294,18.0267319860065,22.0612210140017,30.8922951644245,26.5785223838174,36.5847898934669,29.8182709881281,25.8548885888045,29.614335597614,28.8415843007238,31.2442743735762,27.8562024434724,38.1034953026459,28.9710814862139,33.9520228016121,26.7855835522149,28.1149937456699,26.400932433677,29.46098382245,23.8436189947321,27.6158191601424,32.9382831453657,31.2227903120286,30.7318994426258,25.7808317209086,26.0743898584055,25.812544496256,27.9978642773051,30.5363895364247,23.735400503842,35.1706629492143,27.1998321483409,16.7373087218424,26.902134971222,30.7265607289067,21.2330048596416,29.5592501620151,30.3746864662752|short_description=p1@Itsn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20403 | |||
|HGNC= | |||
|MCL_coexpression_id=317 | |||
|TSSclassifier=NA | |||
|UniProt=B2RR82,E9QNG1,Q3V3Y8,Q8CD59,Q3TQ85 | |||
|association_with_transcript=0bp_to_ENSMUST00000020972,ENSMUST00000062580,ENSMUST00000164218,NM_001198968,NM_001198969,NM_011365,uc007mxv.2,uc007mxw.2,uc007mxx.1_5end | |||
|cluster_id=chr12:4599798..4599893,+ | |||
|description=CAGE_peak_1_at_Itsn2_5end | |||
|id=chr12:4599798..4599893,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.31e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.31e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.92e-11!130;UBERON:0000925!3.92e-11!130;UBERON:0006595!3.92e-11!130;UBERON:0001007!1.72e-10!128;UBERON:0001555!1.72e-10!128;UBERON:0007026!1.72e-10!128;UBERON:0004921!4.61e-10!126;UBERON:0004185!4.61e-10!126;UBERON:0005911!2.90e-08!69;UBERON:0000077!9.72e-08!97;UBERON:0001004!1.41e-07!42;UBERON:0000065!2.92e-07!41;UBERON:0007023!2.99e-07!51;UBERON:0004177!3.67e-07!29;UBERON:0003929!9.22e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.44e-12,118;UBERON:0000925,5.44e-12,118;UBERON:0006595,5.44e-12,118;UBERON:0001007,2.53e-11,116;UBERON:0001555,2.53e-11,116;UBERON:0007026,2.53e-11,116;UBERON:0004921,6.98e-11,114;UBERON:0000077,4.82e-09,35;UBERON:0005911,2.90e-08,69;UBERON:0001004,1.41e-07,42;UBERON:0001041,2.10e-07,80;UBERON:0000065,2.92e-07,41;UBERON:0007023,2.99e-07,51;UBERON:0004177,3.67e-07,29;UBERON:0005057,3.67e-07,29;UBERON:0003929,9.22e-07,55 | |||
|phase1_expression=16.6554800988986,58.976843891052,77.3498706962211,74.708660192787,96.672875879645,54.3928840994523,49.2922671656559,115.565374480211,99.3968378390767,113.755359792489,41.7771842470232,41.8006113135563,107.171656936935,109.974866243099,47.9678057014554,56.4905996017614,29.3815988813822,164.355788151642,166.594036830973,162.541236638646,29.1698485218169,44.0851823331931,39.1799683708403,38.2381890476242,39.2289870624861,43.0673973086265,43.5069616120666,46.541786260152,25.8431850460668,34.2760976473506,25.9424697466706,12.065582795733,12.916360539276,0,25.7077941578634,16.4572298904907,27.7670324516822,139.789564666127,82.040211174999,97.8989401231003,157.646038792312,181.007053513988,143.711064497221,20.7729749659703,21.7960402121956,16.3356609423897,3.9119567217402,6.75877984779384,4.61340983742391,7.19390626574849,6.01941612989059,0,146.306432482346,96.4731648875088,98.8115769478844,21.0952737549477,26.3610764743656,21.6582278756526,6.06949382578793,4.7609188134483,6.33831403506179,7.45457970552091,1.77858959222228,17.997994345628,21.7550599764734,25.5772841380596,12.2836045312546,10.373894243682,6.63613518774257,5.13022565660425,7.57169860864975,11.9973413449598,9.49734726091938,6.00204916153275,4.12135525378416,6.43453150627015,24.2254938198655,23.8775322219301,20.8904885228491,7.12185953743047,4.84884511092771,6.77187381723788,18.4260779340911,21.3849791812038,27.1980881042722,15.6153150301044,13.9524247183121,9.31997229126503,36.5000251865947,37.332350692752,78.5532764381547,48.1837371109576,17.6792546764015,20.5087212822371,33.1385972898311,34.4980703064948,29.2124393874044,15.6795896771813,11.950156211732,9.54016851177919,20.281452447842,20.5322363862909,33.1246811618639,35.5533351576666,27.277871167413,34.4569417046134,32.3535644809461,36.6530253898183,139.826457169473,31.9150598989373,17.6955033301459,16.7456013071678,17.5267777914604,21.8547828801303,26.2222816912622,26.8926505445506,40.7871696761717,43.2352077190536,66.3457913962406,29.9268672402707,49.4685001351282,47.0328995541165,44.7340226923493,16.6885054296582,14.2423760633149,38.8294723917059,38.7002852154123,20.3966928537759,29.9885735892433,26.0635712564392,38.4300506367646,9.67538511269056,40.3272422846081,28.3844157636667,25.7657175253855,21.7403292510795,19.7568365869614,41.8007421249913,35.3811861807145,54.9253243863697,11.3204785377552,11.2652031172402,11.884100567153,17.1803492332715,17.2132342852859,19.601399203582,18.9277483610652,41.9099460597205,6.03590380211958,13.0483195315795,17.7710635405588,14.6861140726475,24.190110682627,28.5566776548177,36.217656007798,14.927570011387,21.066395619397,17.2423097766859,29.8371674365372,20.5054514810147,19.7001890384121,19.6267646992506,24.1479630296914,20.8570085652248,26.8424776424038,26.9739375910473,27.9004337455604,28.3739781952222,24.1902979372816,34.6393349206891,42.3179185829367,35.6727969317811,41.7145219052996,42.946054003319,41.2168299185689,12.7601719350313,51.8757489284563,32.5274196996159,17.0630600428187,19.2756437644164,25.1291549578082,29.2441110703847,27.3524993929191,28.5338439168839,36.5387377389274,27.0106285747378,38.7056221552415,31.634079054543,37.4331047268711,37.7504151634773,39.1209870273197,37.438559371821,8.34538764193559,18.6225075553858,19.1603150644237,22.6052973908299,26.7654432291324,28.405007055579,41.4199318163885,40.1499602504518,44.7446374347918,38.37651797968,30.5346205899763,28.8642032888843,24.5698743891504,26.3088671490279,23.5317740810663,29.6647906495473,30.5551022137704,33.6604480817448,30.9678283140318,29.3780712111247,28.7536413054709,37.2140947668503,36.5084077544036,37.3816739361725,25.2950353065896,34.7359335381624,68.9129399321435,14.9698215298683,18.2520773615069,18.3324692637203,20.4180516010997,36.6838703797576,38.5630698235342,45.2710063030093,45.2412863584768,42.9641497918623,53.4173475002582,73.4107649926506,55.7772491426843,60.7526046042349,25.6345182696763,36.9855864996723,39.8329061145419,39.183017975272,33.3945227174607,31.0610969469338,12.4590558486273,26.5094473564592,18.9304931649754,18.350620981942,20.4652227846159,24.3748173911603,24.9534514972281,26.6091938941502,21.4549671887694,30.3946092227764,21.7408277870588,29.8828824272281,35.6269613872754,14.6013795007149,19.220661203722,37.7781581607106,43.8058956521877,13.595715624679,14.2092071773433,18.8605079755898,11.2214719294694,21.5204603560749,28.6855405416725,30.5368332761105,23.8853243517763,41.0847785316561,49.5467460302494,57.7559042189846,35.0652793926402,16.9257428389432,5.95049945400671,13.9319072770535,21.9901889716419,20.334045206636,20.5686275752651,10.9607381681256,46.6996699046784,43.8492386688108,37.7103560673985,56.0613260001032,36.0065671531869,46.2600134198955,55.6275123054616,61.2245556049078,48.6772997171851,35.9725085900389,65.6144182263754,22.7025554759545,33.5202094539178,42.5712712830602,59.872071741809,65.659335710272,57.7926661979108,51.7820373597535,59.7023886835111,26.7307773044232,13.1279437336171,21.9585024496997,22.2491002092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| |||
|short_description=p1@Itsn2 | |||
}} |
Latest revision as of 15:13, 26 September 2015
Short description: | p1@Itsn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Itsn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | 0bp_to_ENSMUST00000020972, ENSMUST00000062580, ENSMUST00000164218, NM_001198968, NM_001198969, NM_011365, uc007mxv.2, uc007mxw.2, uc007mxx.1_5end |
EntrezGene: | Itsn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.44e-12 | 118 |
endoderm | 5.44e-12 | 118 |
presumptive endoderm | 5.44e-12 | 118 |
digestive system | 2.53e-11 | 116 |
digestive tract | 2.53e-11 | 116 |
primitive gut | 2.53e-11 | 116 |
subdivision of digestive tract | 6.98e-11 | 114 |
mixed endoderm/mesoderm-derived structure | 4.82e-09 | 35 |
endo-epithelium | 2.90e-08 | 69 |
respiratory system | 1.41e-07 | 42 |
foregut | 2.10e-07 | 80 |
respiratory tract | 2.92e-07 | 41 |
adult organism | 2.99e-07 | 51 |
hemopoietic organ | 3.67e-07 | 29 |
immune organ | 3.67e-07 | 29 |
gut epithelium | 9.22e-07 | 55 |