Personal tools

FFCP PHASE1:Mm9::chr17:56273240..56273277,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:56273240..56273277,-
|DHSsupport=NA
|short_description=p2@Sema6b
|DPIdataset=NA
|description=CAGE_peak_2_at_Sema6b_5end
|association_with_transcript=0bp_to_ENSMUST00000167545,NM_013662,uc008dbd.2_5end
|EntrezGene=20359
|EntrezGene=20359
|HGNC=
|HGNC=
|MCL_coexpression_id=2585
|TSSclassifier=NA
|UniProt=O54951,Q3UTK5
|UniProt=O54951,Q3UTK5
|association_with_transcript=0bp_to_ENSMUST00000167545,NM_013662,uc008dbd.2_5end
|cluster_id=chr17:56273240..56273277,-
|description=CAGE_peak_2_at_Sema6b_5end
|id=chr17:56273240..56273277,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000557,4.86e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.62e-10!193;UBERON:0004120!3.62e-10!193;UBERON:0006603!3.62e-10!193;UBERON:0009569!1.42e-08!66;UBERON:0002100!1.55e-08!98;UBERON:0005177!1.41e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.12e-09,90;UBERON:0005177,2.23e-07,79;UBERON:0005153,3.21e-07,17;UBERON:0009569,3.78e-07,66
|phase1_expression=0.160148847104794,0.697950815278722,2.27499619694768,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.473193248037357,0,0,1.10556277196391,0.496454756004426,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0,0,6.27797446105362,10.9386948233332,6.28228492768558,2.35292595212406,6.83045484958446,0.485510353031154,0.503587271902309,0.101376931219515,0.183546752161682,1.56478268869608,0.218025156380447,0,0,0.139986421625363,0,0,0,0,1.80081605225163,2.0057340795713,1.54701627683233,0.202316460859598,0,1.26766280701236,0.338844532069132,0.889294796111139,5.39939830368839,10.8775299882367,7.104801149461,4.19440154725767,3.45796474789399,0.311068836925433,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,2.20231761998777,0.510749352340751,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0.605809546665472,0.755715601067855,25.7979394944493,4.30211938490693,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,1.1418387971906,1.29468941823586,2.82040064223167,2.60227990149204,2.13125834818499,2.99800146432876,2.71300752994721,2.93971767839262,2.13633205260448,2.47194967734374,2.60278842455841,1.76922110389975,0.485300549842228,1.54589062922275,2.42437626567611,0,0,1.04723353406728,0.255457055208591,3.11519323715393,2.99951365496704,3.17675567682662,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.712875546952214,1.7416975885413,0,0.631325567659422,0,0,0,0.753524089178575,0.748401490664606,0.640568601424249,0.187403449119458,0.517406741478031,0.431135985865684,0.378212160335639,0.527853372491847,0.43839146485515,0.834141747676794,1.39300866608867,0.823128545631774,0.199034266818493,4.91549231119264,3.60287069960601,3.6941254921427,0.414251545071004,0.469052119962192,1.44049649168812,0.710234206755631,0.787056926989615,1.3884040159864,2.32533944750408,2.14618721119695,1.63471479314037,1.97471819896177,3.2833492815819,4.13450928683864,4.67839959761063,3.51280184465681,4.2946054003319,0.630869845692382,0.102904612379284,1.32167513193519,0.264450566663544,0.426576501070468,0.696710015581316,0.257734922644187,1.00841762311671,0.889512175379481,0.190225626112559,0.949058123089023,0.988193728344065,0.251335208800269,0.596869416123452,0.974820435595601,0,0.216138049874694,0.597423819763102,0.758671603812327,0.799739588268102,1.1270773567308,0.814605311381257,0.969762435838129,1.05203729835478,1.51767689098217,1.32849133181642,2.19798218977925,2.59134044235781,1.77871576252289,0.83422552858047,0.982794975566015,0.674586337154561,0.811440485554012,1.68824011826692,1.78238096246994,4.60313819921297,2.91843408195064,1.37280706594041,1.43768206527355,2.60498663367952,1.87222603868736,1.26289438973556,0.358794827043824,0.964887042726734,4.0645701836653,0.568474235311454,1.62964976442026,2.54617628662782,1.40814148973101,2.68010011906905,4.04674189506223,2.34160377429359,1.57635144106191,1.7717175171902,1.43509291791738,2.45794972073607,1.89953480052485,4.19482269886384,7.53956419696361,14.6854534631052,1.47529281905711,1.93155722413313,0.642202359951168,0.703270119553219,0.163934945376675,3.02965112645248,0,0,0,0,0,0,0,0,0,0.321321316421807,1.56134093729095,0.534196811001766,0.977321756121456,1.81467135269789,1.32745138339963,0.971122544619926,0.604647113929502,1.32023555829129,1.47650946440386,0.922305443831782,1.80899805217755,0,2.85197902707777,1.26414703174326,0,5.15677716240934,0.340439605753788,0,0.776152102696527,0.857348140126369,0.354680467284547,0.535106452806212,0.987294123612726,2.13125464380219,1.87737366450968,1.48282449604674,1.32317038832977,1.15420377059036,1.77610869365496,1.26657142349127,0.716234064018819,1.14898629821543,0,0.741701208042039,2.05045056957423,1.44470807574256,0.740778109478847,1.13021074202815,0.546776910884101,0.915112692826091,1.5298058699447,1.25956307091292,0.829199842826543,0.954670618015114,0.474503990371703,0.813277868507395,0.756037385752609,0.627264888043406,0.436725127492355,0.539457385539283,1.07449492442937,0.785267825952089,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.583353565032143,0.645799117388655,0.168956125490778,0.704143431874524,0.13020438484395,0.209718688851422,0.483168241652012,0,0.316011120628178,0,0.616265742988964,0.389762468933385,0.895133478337407,0.79472541912506,0.721172697119813,0.443068581523732,0.807731599585181,0.304827226619999,0,0.292373642219257,0.288635524920988,0.350630706544707,0.680191150845634,0,1.16628013592318,0.839423081820392,0.772758376128762,3.37828455812128,1.64836461840539,1.50057865355346,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,1.19707462020309,0.341467211508268,0.972426868273176,0,0.919217542250071,1.33348036680969,1.23621034343337,1.92551525755089,2.02157769411038,1.77435509923168,0.943131706930381,1.31098110457835,1.6646539625266,1.55075766180156,1.90517476513229,1.27472758539341,0.964546102318525,0.412085900803307,1.76638704161277,0.342869252385415,0.354951612318675,2.38436189947321,1.16277133305863,1.31753132581463,1.69229215783353,2.19513567447327,0.789209134313529,2.30866993537965,1.12228454331548,1.06771516311757,1.57607171800902,1.63692417267876,1.08455788830176,1.54325288784913,0.749431733813838,1.87145286756327,2.14871054048298,3.63447830930802,2.20591419119516,1.62307484934295
|phase1_expression=0.160148847104794,0.697950815278722,2.27499619694768,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.473193248037357,0,0,1.10556277196391,0.496454756004426,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0,0,6.27797446105362,10.9386948233332,6.28228492768558,2.35292595212406,6.83045484958446,0.485510353031154,0.503587271902309,0.101376931219515,0.183546752161682,1.56478268869608,0.218025156380447,0,0,0.139986421625363,0,0,0,0,1.80081605225163,2.0057340795713,1.54701627683233,0.202316460859598,0,1.26766280701236,0.338844532069132,0.889294796111139,5.39939830368839,10.8775299882367,7.104801149461,4.19440154725767,3.45796474789399,0.311068836925433,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,2.20231761998777,0.510749352340751,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0.605809546665472,0.755715601067855,25.7979394944493,4.30211938490693,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,1.1418387971906,1.29468941823586,2.82040064223167,2.60227990149204,2.13125834818499,2.99800146432876,2.71300752994721,2.93971767839262,2.13633205260448,2.47194967734374,2.60278842455841,1.76922110389975,0.485300549842228,1.54589062922275,2.42437626567611,0,0,1.04723353406728,0.255457055208591,3.11519323715393,2.99951365496704,3.17675567682662,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.712875546952214,1.7416975885413,0,0.631325567659422,0,0,0,0.753524089178575,0.748401490664606,0.640568601424249,0.187403449119458,0.517406741478031,0.431135985865684,0.378212160335639,0.527853372491847,0.43839146485515,0.834141747676794,1.39300866608867,0.823128545631774,0.199034266818493,4.91549231119264,3.60287069960601,3.6941254921427,0.414251545071004,0.469052119962192,1.44049649168812,0.710234206755631,0.787056926989615,1.3884040159864,2.32533944750408,2.14618721119695,1.63471479314037,1.97471819896177,3.2833492815819,4.13450928683864,4.67839959761063,3.51280184465681,4.2946054003319,0.630869845692382,0.102904612379284,1.32167513193519,0.264450566663544,0.426576501070468,0.696710015581316,0.257734922644187,1.00841762311671,0.889512175379481,0.190225626112559,0.949058123089023,0.988193728344065,0.251335208800269,0.596869416123452,0.974820435595601,0,0.216138049874694,0.597423819763102,0.758671603812327,0.799739588268102,1.1270773567308,0.814605311381257,0.969762435838129,1.05203729835478,1.51767689098217,1.32849133181642,2.19798218977925,2.59134044235781,1.77871576252289,0.83422552858047,0.982794975566015,0.674586337154561,0.811440485554012,1.68824011826692,1.78238096246994,4.60313819921297,2.91843408195064,1.37280706594041,1.43768206527355,2.60498663367952,1.87222603868736,1.26289438973556,0.358794827043824,0.964887042726734,4.0645701836653,0.568474235311454,1.62964976442026,2.54617628662782,1.40814148973101,2.68010011906905,4.04674189506223,2.34160377429359,1.57635144106191,1.7717175171902,1.43509291791738,2.45794972073607,1.89953480052485,4.19482269886384,7.53956419696361,14.6854534631052,1.47529281905711,1.93155722413313,0.642202359951168,0.703270119553219,0.163934945376675,3.02965112645248,0,0,0,0,0,0,0,0,0,0.321321316421807,1.56134093729095,0.534196811001766,0.977321756121456,1.81467135269789,1.32745138339963,0.971122544619926,0.604647113929502,1.32023555829129,1.47650946440386,0.922305443831782,1.80899805217755,0,2.85197902707777,1.26414703174326,0,5.15677716240934,0.340439605753788,0,0.776152102696527,0.857348140126369,0.354680467284547,0.535106452806212,0.987294123612726,2.13125464380219,1.87737366450968,1.48282449604674,1.32317038832977,1.15420377059036,1.77610869365496,1.26657142349127,0.716234064018819,1.14898629821543,0,0.741701208042039,2.05045056957423,1.44470807574256,0.740778109478847,1.13021074202815,0.546776910884101,0.915112692826091,1.5298058699447,1.25956307091292,0.829199842826543,0.954670618015114,0.474503990371703,0.813277868507395,0.756037385752609,0.627264888043406,0.436725127492355,0.539457385539283,1.07449492442937,0.785267825952089,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.583353565032143,0.645799117388655,0.168956125490778,0.704143431874524,0.13020438484395,0.209718688851422,0.483168241652012,0,0.316011120628178,0,0.616265742988964,0.389762468933385,0.895133478337407,0.79472541912506,0.721172697119813,0.443068581523732,0.807731599585181,0.304827226619999,0,0.292373642219257,0.288635524920988,0.350630706544707,0.680191150845634,0,1.16628013592318,0.839423081820392,0.772758376128762,3.37828455812128,1.64836461840539,1.50057865355346,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,1.19707462020309,0.341467211508268,0.972426868273176,0,0.919217542250071,1.33348036680969,1.23621034343337,1.92551525755089,2.02157769411038,1.77435509923168,0.943131706930381,1.31098110457835,1.6646539625266,1.55075766180156,1.90517476513229,1.27472758539341,0.964546102318525,0.412085900803307,1.76638704161277,0.342869252385415,0.354951612318675,2.38436189947321,1.16277133305863,1.31753132581463,1.69229215783353,2.19513567447327,0.789209134313529,2.30866993537965,1.12228454331548,1.06771516311757,1.57607171800902,1.63692417267876,1.08455788830176,1.54325288784913,0.749431733813838,1.87145286756327,2.14871054048298,3.63447830930802,2.20591419119516,1.62307484934295
|short_description=p2@Sema6b
}}
}}

Latest revision as of 16:58, 26 September 2015

Short description:p2@Sema6b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sema6b_5end
Coexpression cluster:MCL_coexpression_mm9:2585
Association with transcript: 0bp_to_ENSMUST00000167545, NM_013662, uc008dbd.2_5end
EntrezGene:Sema6b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sema6b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
granulocyte monocyte progenitor cell4.86e-077

Uber anatomy
Ontology termp-valuen
trunk2.12e-0990
trunk region element2.23e-0779
epithelial bud3.21e-0717
subdivision of trunk3.78e-0766
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:56273240..56273277,-&oldid=4264120"