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FFCP PHASE1:Mm9::chr17:57201683..57201738,+: Difference between revisions

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{{FFCP|EntrezGene=224912|HGNC=|MCL_coexpression_id=963|UniProt=Q8QZT4|association_with_transcript=0bp_to_ENSMUST00000163763,ENSMUST00000169543,NM_177638,uc008ddx.1_5end|description=CAGE_peak_1_at_Crb3_5end|id=chr17:57201683..57201738,+|ontology_enrichment_celltype=CL:0000066!1.81e-08!25;CL:0002563!9.80e-07!9;CL:0002251!9.80e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,5.30e-10,25;CL:0002563,2.31e-07,9;CL:0002251,2.31e-07,9;CL:0000223,2.33e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.20e-24!130;UBERON:0000925!1.20e-24!130;UBERON:0006595!1.20e-24!130;UBERON:0001007!6.48e-24!128;UBERON:0001555!6.48e-24!128;UBERON:0007026!6.48e-24!128;UBERON:0004921!1.31e-22!126;UBERON:0004185!1.31e-22!126;UBERON:0000160!1.47e-21!43;UBERON:0005409!1.03e-20!59;UBERON:0000344!1.50e-10!15;UBERON:0005177!6.18e-10!85;UBERON:0000466!9.36e-10!79;UBERON:0001242!2.38e-09!13;UBERON:0000060!2.38e-09!13;UBERON:0001262!2.38e-09!13;UBERON:0004786!2.38e-09!13;UBERON:0002108!3.61e-09!16;UBERON:0000077!4.26e-09!97;UBERON:0001041!7.61e-08!92;UBERON:0002100!3.06e-07!98;UBERON:0001045!3.61e-07!13;UBERON:0000485!3.82e-07!11;UBERON:0000464!4.55e-07!57;UBERON:0004923!5.96e-07!24;UBERON:0005178!8.10e-07!17;UBERON:0005181!8.10e-07!17;UBERON:0002224!8.10e-07!17;UBERON:0000915!8.10e-07!17;UBERON:0008947!8.10e-07!17;UBERON:0003258!8.10e-07!17;UBERON:0003350!9.80e-07!9;UBERON:0004808!9.80e-07!9;UBERON:0001277!9.80e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.37e-18,118;UBERON:0000925,9.37e-18,118;UBERON:0006595,9.37e-18,118;UBERON:0000160,1.94e-17,31;UBERON:0001007,4.43e-17,116;UBERON:0001555,4.43e-17,116;UBERON:0007026,4.43e-17,116;UBERON:0005409,1.41e-16,47;UBERON:0004921,6.87e-16,114;UBERON:0005177,6.14e-12,79;UBERON:0000344,1.24e-11,15;UBERON:0001242,2.74e-10,13;UBERON:0001262,2.74e-10,13;UBERON:0004786,2.74e-10,13;UBERON:0002100,3.45e-09,90;UBERON:0000485,8.07e-08,11;UBERON:0004923,1.01e-07,24;UBERON:0005178,1.87e-07,17;UBERON:0005181,1.87e-07,17;UBERON:0002224,1.87e-07,17;UBERON:0000915,1.87e-07,17;UBERON:0008947,1.87e-07,17;UBERON:0003258,1.87e-07,17;UBERON:0003350,2.31e-07,9;UBERON:0004808,2.31e-07,9;UBERON:0001277,2.31e-07,9;UBERON:0001264,2.82e-07,12;UBERON:0009569,5.90e-07,66|phase1_expression=4.80446541314382,36.6424178021329,45.9549231783431,23.2897442706259,25.5456822272637,23.5030980676646,23.5948767001481,0,0.563154888606667,0.468129052643987,0.34243593645101,0.0797721589953364,0,0.0874204024189974,0.666219523631325,0.607425802169478,0,0.630924330716475,0.822686601634433,1.27316895539409,5.3577272795174,0,0,19.3590831580022,25.693839479523,44.2158612368566,28.861053742658,28.6576739472232,30.7837939519326,36.0403085556701,43.2374495777844,0,0,0,14.731432607315,18.1195763440757,13.4751775133164,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.75748946187577,1.94429899074283,0,0,2.01339127269284,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,1.71390590642282,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0.589257170947335,0.427115042397309,0.186399445825301,0,0,7.8263411949453,6.88339101585109,18.3592260101093,2.69851595818909,3.24888208723835,3.58421509677868,4.35377702408431,0,0,0,11.8308472612412,0,0,0,27.277871167413,29.3897443951114,26.7927955857835,8.44960709921044,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,19.7755974187499,0,0,0,0,0,16.775258509631,0.585561594023094,0.41889341362691,21.2029355823131,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0.41557608911912,0,2.03678727700633,2.23932547098167,9.85618757891331,8.41767423545896,0.650602214813519,0.229902104433473,0.720248519221397,0.452114453507145,0.408218994907967,0.12811372028485,0.468508622798644,1.29351685369508,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,1.11218899690239,3.1342694986995,1.23469281844766,1.79130840136644,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0,0,0,0.134206418760372,0.841159794256509,0.411618449517138,18.8338706300765,14.5447811664949,2.98603550749328,2.32236671860439,5.7990357594942,7.46229041106367,7.11609740303585,9.89173255785308,16.1339880925134,11.1995289212327,11.3100843960121,14.523822459004,12.2827374885046,11.6846523125049,14.4812493416045,17.5244320463843,4.55202962287396,3.54170389090159,4.50830942692322,3.25842124552503,6.7883370508669,7.925347647606,7.65162099203513,9.00421902675573,9.41992367048249,10.2419646055094,2.96452627087149,0,0.589676985339609,0.899448449539415,1.62288097110802,2.17059443777175,4.83789118384698,7.19240343627027,9.72811360650212,5.21666685057355,8.62609239164127,5.58211421502755,4.68056509671841,3.53610429125956,5.02312757861354,5.30687873499704,10.3461786493299,3.03186258832776,4.88894929326078,4.58311731593008,5.63256595892405,8.5428191295326,10.7119638398706,19.1230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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=224912
|HGNC=
|MCL_coexpression_id=963
|TSSclassifier=NA
|UniProt=Q8QZT4
|association_with_transcript=0bp_to_ENSMUST00000163763,ENSMUST00000169543,NM_177638,uc008ddx.1_5end
|cluster_id=chr17:57201683..57201738,+
|description=CAGE_peak_1_at_Crb3_5end
|id=chr17:57201683..57201738,+
|ontology_enrichment_celltype=CL:0000066!1.81e-08!25;CL:0002563!9.80e-07!9;CL:0002251!9.80e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000066,5.30e-10,25;CL:0002563,2.31e-07,9;CL:0002251,2.31e-07,9;CL:0000223,2.33e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.20e-24!130;UBERON:0000925!1.20e-24!130;UBERON:0006595!1.20e-24!130;UBERON:0001007!6.48e-24!128;UBERON:0001555!6.48e-24!128;UBERON:0007026!6.48e-24!128;UBERON:0004921!1.31e-22!126;UBERON:0004185!1.31e-22!126;UBERON:0000160!1.47e-21!43;UBERON:0005409!1.03e-20!59;UBERON:0000344!1.50e-10!15;UBERON:0005177!6.18e-10!85;UBERON:0000466!9.36e-10!79;UBERON:0001242!2.38e-09!13;UBERON:0000060!2.38e-09!13;UBERON:0001262!2.38e-09!13;UBERON:0004786!2.38e-09!13;UBERON:0002108!3.61e-09!16;UBERON:0000077!4.26e-09!97;UBERON:0001041!7.61e-08!92;UBERON:0002100!3.06e-07!98;UBERON:0001045!3.61e-07!13;UBERON:0000485!3.82e-07!11;UBERON:0000464!4.55e-07!57;UBERON:0004923!5.96e-07!24;UBERON:0005178!8.10e-07!17;UBERON:0005181!8.10e-07!17;UBERON:0002224!8.10e-07!17;UBERON:0000915!8.10e-07!17;UBERON:0008947!8.10e-07!17;UBERON:0003258!8.10e-07!17;UBERON:0003350!9.80e-07!9;UBERON:0004808!9.80e-07!9;UBERON:0001277!9.80e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.37e-18,118;UBERON:0000925,9.37e-18,118;UBERON:0006595,9.37e-18,118;UBERON:0000160,1.94e-17,31;UBERON:0001007,4.43e-17,116;UBERON:0001555,4.43e-17,116;UBERON:0007026,4.43e-17,116;UBERON:0005409,1.41e-16,47;UBERON:0004921,6.87e-16,114;UBERON:0005177,6.14e-12,79;UBERON:0000344,1.24e-11,15;UBERON:0001242,2.74e-10,13;UBERON:0001262,2.74e-10,13;UBERON:0004786,2.74e-10,13;UBERON:0002100,3.45e-09,90;UBERON:0000485,8.07e-08,11;UBERON:0004923,1.01e-07,24;UBERON:0005178,1.87e-07,17;UBERON:0005181,1.87e-07,17;UBERON:0002224,1.87e-07,17;UBERON:0000915,1.87e-07,17;UBERON:0008947,1.87e-07,17;UBERON:0003258,1.87e-07,17;UBERON:0003350,2.31e-07,9;UBERON:0004808,2.31e-07,9;UBERON:0001277,2.31e-07,9;UBERON:0001264,2.82e-07,12;UBERON:0009569,5.90e-07,66
|phase1_expression=4.80446541314382,36.6424178021329,45.9549231783431,23.2897442706259,25.5456822272637,23.5030980676646,23.5948767001481,0,0.563154888606667,0.468129052643987,0.34243593645101,0.0797721589953364,0,0.0874204024189974,0.666219523631325,0.607425802169478,0,0.630924330716475,0.822686601634433,1.27316895539409,5.3577272795174,0,0,19.3590831580022,25.693839479523,44.2158612368566,28.861053742658,28.6576739472232,30.7837939519326,36.0403085556701,43.2374495777844,0,0,0,14.731432607315,18.1195763440757,13.4751775133164,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.75748946187577,1.94429899074283,0,0,2.01339127269284,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,1.71390590642282,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0.589257170947335,0.427115042397309,0.186399445825301,0,0,7.8263411949453,6.88339101585109,18.3592260101093,2.69851595818909,3.24888208723835,3.58421509677868,4.35377702408431,0,0,0,11.8308472612412,0,0,0,27.277871167413,29.3897443951114,26.7927955857835,8.44960709921044,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,19.7755974187499,0,0,0,0,0,16.775258509631,0.585561594023094,0.41889341362691,21.2029355823131,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0.41557608911912,0,2.03678727700633,2.23932547098167,9.85618757891331,8.41767423545896,0.650602214813519,0.229902104433473,0.720248519221397,0.452114453507145,0.408218994907967,0.12811372028485,0.468508622798644,1.29351685369508,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,1.11218899690239,3.1342694986995,1.23469281844766,1.79130840136644,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0,0,0,0.134206418760372,0.841159794256509,0.411618449517138,18.8338706300765,14.5447811664949,2.98603550749328,2.32236671860439,5.7990357594942,7.46229041106367,7.11609740303585,9.89173255785308,16.1339880925134,11.1995289212327,11.3100843960121,14.523822459004,12.2827374885046,11.6846523125049,14.4812493416045,17.5244320463843,4.55202962287396,3.54170389090159,4.50830942692322,3.25842124552503,6.7883370508669,7.925347647606,7.65162099203513,9.00421902675573,9.41992367048249,10.2419646055094,2.96452627087149,0,0.589676985339609,0.899448449539415,1.62288097110802,2.17059443777175,4.83789118384698,7.19240343627027,9.72811360650212,5.21666685057355,8.62609239164127,5.58211421502755,4.68056509671841,3.53610429125956,5.02312757861354,5.30687873499704,10.3461786493299,3.03186258832776,4.88894929326078,4.58311731593008,5.63256595892405,8.5428191295326,10.7119638398706,19.1230974900643,5.35959489961049,4.65075848262427,6.218735977642,10.9788420859544,11.9152637487468,14.0309586824066,0,0,6.39293554924747,7.72622889653251,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.98716119291576,2.67098405500883,2.28041743095006,6.10389454998381,19.9117707509944,7.28341908464944,9.67435382287203,12.2593301841334,14.7650946440386,13.2197113615889,13.4382712447475,11.6330793432802,10.3384239731569,18.0140952023415,14.7586052004998,24.7525303795648,9.53230896110606,3.24109969256358,5.04498866752743,7.28745919107414,5.49754724291048,5.35106452806212,3.9491764944509,4.56697423671899,2.58138878870081,15.4637411730589,8.60060752414351,5.44124634706884,3.55221738730992,4.04096597018644,6.92359595218192,6.07321329056727,14.8655226681224,0.370850604021019,0.341741761595705,1.857481811669,0.370389054739423,0,0,0,0.509935289981566,0.279902904647316,0.690999869022119,29.5947891584685,1.73984796469624,4.06638934253697,7.99239522081329,6.48173717644853,10.4814030598165,9.97996163247673,11.1582165229204,18.061159996898,26.5710695248175,11.8054469486516,0,0.299033092087958,0.496375471371293,0.388902376688095,0.774958940866387,0.337912250981556,0,1.3020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0.632022241256357,1.21635129174099,0.513554785824136,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0,0.292373642219257,0.384847366561318,0.233753804363138,6.80191150845634,4.43971906748129,1.43542170575161,3.35769232728157,4.44336066274038,9.19644129710792,8.60812634056146,15.6488916727718,22.5707446815914,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.729320151204882,1.88651846365184,2.75765262675021,1.77797382241292,1.03017528619447,0.962757628775446,2.02157769411038,1.77435509923168,1.88626341386076,2.52832070168682,2.68905640100451,2.06767688240208,1.42888107384922,3.82418275618023,1.15745532278223,2.06042950401653,2.35518272215036,1.71434626192708,1.77475806159337,2.86123427936785,1.88950341622027,1.97629698872194,1.35383372626682,2.37806364734604,1.05227884575137,1.49384525230448,1.12228454331548,1.89816028998679,1.87158516513571,3.27384834535751,1.23949472948773,1.92906610981141,2.24829520144151,2.10538447600868,2.57845264857958,0.765153328275374,1.76473135295612,0.463735671240843
|short_description=p1@Crb3
}}

Latest revision as of 17:36, 26 September 2015

Short description:p1@Crb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Crb3_5end
Coexpression cluster:MCL_coexpression_mm9:963
Association with transcript: 0bp_to_ENSMUST00000163763, ENSMUST00000169543, NM_177638, uc008ddx.1_5end
EntrezGene:Crb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Crb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I645.95
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.29
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.59
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.69
GP2+ M cell, pool1.CNhs13228.11845-124H944.22
GP2+ M cell, pool2.CNhs13231.11846-124I128.86
GP2+ M cell, pool3.CNhs13240.11847-124I228.66
Ileum epithelium, pool1.CNhs13199.10252-104B930.78
Ileum epithelium, pool2.CNhs13232.10253-104C136.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C843.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G127.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G229.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A819.78
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H721.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I318.83
intestine, adult.CNhs10496.178-9A314.54
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F214.52
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E314.48
intestine, neonate N30.CNhs11131.1384-42G117.52
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G77.93
kidney, neonate N10.CNhs11206.758-6D57.65
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H110.24
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H15.02
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B110.35
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H214.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E512.26
pancreas, embryo E17.CNhs10599.1558-45G314.77
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H524.75
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G315.46
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.04
skin, neonate N06.CNhs11097.693-20I56.92
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H629.59
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D47.99
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B89.98
stomach, neonate N07.CNhs11210.718-18A911.16
stomach, neonate N25.CNhs11104.1355-25E418.06
stomach, neonate N30.CNhs11134.1386-42I126.57
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E58.61
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F822.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.30e-1025
intestinal epithelial cell2.31e-079
epithelial cell of alimentary canal2.31e-079
endodermal cell2.33e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.37e-18118
endoderm9.37e-18118
presumptive endoderm9.37e-18118
intestine1.94e-1731
digestive system4.43e-17116
digestive tract4.43e-17116
primitive gut4.43e-17116
gastrointestinal system1.41e-1647
subdivision of digestive tract6.87e-16114
trunk region element6.14e-1279
mucosa1.24e-1115
intestinal mucosa2.74e-1013
wall of intestine2.74e-1013
gastrointestinal system mucosa2.74e-1013
trunk3.45e-0990
simple columnar epithelium8.07e-0811
organ component layer1.01e-0724
thoracic cavity element1.87e-0717
thoracic segment organ1.87e-0717
thoracic cavity1.87e-0717
thoracic segment of trunk1.87e-0717
respiratory primordium1.87e-0717
endoderm of foregut1.87e-0717
epithelium of mucosa2.31e-079
gastrointestinal system epithelium2.31e-079
intestinal epithelium2.31e-079
pancreas2.82e-0712
subdivision of trunk5.90e-0766
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