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FFCP PHASE1:Mm9::chr7:4610342..4610388,-: Difference between revisions

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{{FFCP|EntrezGene=243819|HGNC=|UniProt=Q7TSI3|association_with_transcript=163bp_to_ENSMUST00000064099,NM_172894,uc009eyb.1_5end|description=CAGE_peak_5_at_Ppp6r1_5end|id=chr7:4610342..4610388,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!2.39e-09!99;UBERON:0002193!2.45e-09!48;UBERON:0002390!8.66e-09!45;UBERON:0003061!8.66e-09!45;UBERON:0002405!6.57e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.90e-10,48;UBERON:0002405,1.90e-10,48;UBERON:0002390,8.70e-10,45;UBERON:0003061,8.70e-10,45;UBERON:0003408,1.20e-07,24;UBERON:0002370,1.23e-07,23;UBERON:0000974,1.23e-07,23;UBERON:0004807,1.23e-07,23;UBERON:0005058,1.23e-07,23;UBERON:0003351,1.23e-07,23;UBERON:0009113,1.23e-07,23;UBERON:0003295,1.23e-07,23;UBERON:0009722,1.23e-07,23;UBERON:0005562,1.23e-07,23;UBERON:0007690,1.23e-07,23;UBERON:0002021,2.87e-07,10;UBERON:0000411,2.87e-07,10;UBERON:0001950,2.87e-07,10;UBERON:0006562,5.23e-07,24;UBERON:0001557,5.23e-07,24;UBERON:0001042,5.23e-07,24;UBERON:0008814,5.23e-07,24;UBERON:0009145,5.23e-07,24|phase1_expression=0.320297694209588,3.14077866875425,2.27499619694768,3.0246421130683,3.50627010962443,1.84667199103079,2.33612640595526,3.09895976259783,2.111830832275,1.87251621057595,0.513653904676515,1.11681022593471,1.71200729931206,2.53519167015092,1.66554880907831,1.61980213911861,0.699561878128147,1.10411757875383,2.4680598049033,0.84877930359606,1.19060606211498,2.08510997521859,2.35079810225042,1.43993180514066,1.60586496747019,2.8711598205751,2.58457197695445,1.50829862880122,3.04037471130198,1.00812051903972,1.55211357458713,1.27006134691926,0,0,0.866554859253824,1.82858109894342,0,3.34825304589526,3.906676722619,2.09409497589519,4.1176204162171,2.04913645487534,2.91306211818692,0.125896817975577,0.304130793658544,0.183546752161682,1.56478268869608,0.65407546914134,0.878744730937887,1.74986909166855,0.979904951377538,1.43752564364972,2.18117387875057,3.62681071005672,4.7053131879945,0.257259436035947,0.573066879877513,0,0.606949382578793,0,0.633831403506179,1.35537812827653,1.77858959222228,5.39939830368839,2.96659908770092,4.2628806896766,3.29560121570245,3.07374644257244,0.414758449233911,0.810035629990144,0.420649922702764,2.28520787523043,2.20868540951614,0.734944795289724,0.575072826109418,0,2.20231761998777,3.44755812830007,1.53606533256243,0.659431438650969,0.640413505216868,0,3.07101298901519,1.12552522006336,4.73674568108111,0.589257170947335,1.13897344639282,0.372798891650601,0.757261933331841,0.755715601067855,0.869593466105033,1.72084775396277,0.679971333707751,2.15881276655127,0.649776417447669,1.79210754838934,0.702222100658759,0.340860645156116,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.1418387971906,1.8125651855302,0.593768556259299,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,0.823120949949934,1.0053327306374,1.48316980640624,0.578397427679647,0,0.970601099684455,0.441683036920787,0.484875253135222,1.86391761218122,0.585561594023094,1.8850203613211,1.53274233125155,3.71426885968353,0.599902730993408,3.04968544975355,2.54644086988199,6.8625090422794,2.26177833803156,2.9550134432687,3.3243009452943,2.0778804455956,5.51620294430376,0.101839363850316,1.11966273549084,2.0217820674694,1.26265113531884,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0.862271971731369,0.567318240503458,0.175951124163949,0,0.556094498451196,1.0447564995665,1.02891068203972,0.199034266818493,2.80885274925294,3.3455227924913,3.40996199274711,0.621377317606506,0.703578179943289,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.536546802799238,0.350296027101508,0.16455984991348,0.656669856316381,0.648550476366846,1.31579988682799,0.439100230582101,0.402619256281115,4.6263788684108,0.92614151141356,1.32167513193519,1.58670339998127,0,0.696710015581316,1.03093969057675,0.201683524623343,1.11189021922435,0.760902504450237,3.32170343081158,1.4822905925161,0.754005626400808,0.994782360205754,1.9496408711912,1.79763881730844,1.94524244887225,0.796565093017469,0.189667900953082,0.228497025219458,2.25415471346161,0.610953983535943,0.387904974335251,0.631222379012867,1.3279672796094,1.03327103585722,1.72698600625512,0.987177311374404,2.37162101669719,0.667380422864376,0.589676985339609,0.224862112384854,0.811440485554012,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,1.37280706594041,1.43768206527355,0.372140947668503,1.24815069245824,0.757736633841335,1.4351793081753,0.964887042726734,0.739012760666419,0.568474235311454,0,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,1.17080188714679,0.157635144106191,0.221464689648775,0.956728611944923,1.47476983244164,1.55416483679306,1.73578870297814,1.50791283939272,1.08781136763742,0,0.827810238914197,3.53211297973142,3.16471553798949,0.98360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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=243819
|HGNC=
|TSSclassifier=NA
|UniProt=Q7TSI3
|association_with_transcript=163bp_to_ENSMUST00000064099,NM_172894,uc009eyb.1_5end
|cluster_id=chr7:4610342..4610388,-
|description=CAGE_peak_5_at_Ppp6r1_5end
|id=chr7:4610342..4610388,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.90e-10,48;UBERON:0002405,1.90e-10,48;UBERON:0002390,8.70e-10,45;UBERON:0003061,8.70e-10,45;UBERON:0003408,1.20e-07,24;UBERON:0002370,1.23e-07,23;UBERON:0000974,1.23e-07,23;UBERON:0004807,1.23e-07,23;UBERON:0005058,1.23e-07,23;UBERON:0003351,1.23e-07,23;UBERON:0009113,1.23e-07,23;UBERON:0003295,1.23e-07,23;UBERON:0009722,1.23e-07,23;UBERON:0005562,1.23e-07,23;UBERON:0007690,1.23e-07,23;UBERON:0002021,2.87e-07,10;UBERON:0000411,2.87e-07,10;UBERON:0001950,2.87e-07,10;UBERON:0006562,5.23e-07,24;UBERON:0001557,5.23e-07,24;UBERON:0001042,5.23e-07,24;UBERON:0008814,5.23e-07,24;UBERON:0009145,5.23e-07,24
|phase1_expression=0.320297694209588,3.14077866875425,2.27499619694768,3.0246421130683,3.50627010962443,1.84667199103079,2.33612640595526,3.09895976259783,2.111830832275,1.87251621057595,0.513653904676515,1.11681022593471,1.71200729931206,2.53519167015092,1.66554880907831,1.61980213911861,0.699561878128147,1.10411757875383,2.4680598049033,0.84877930359606,1.19060606211498,2.08510997521859,2.35079810225042,1.43993180514066,1.60586496747019,2.8711598205751,2.58457197695445,1.50829862880122,3.04037471130198,1.00812051903972,1.55211357458713,1.27006134691926,0,0,0.866554859253824,1.82858109894342,0,3.34825304589526,3.906676722619,2.09409497589519,4.1176204162171,2.04913645487534,2.91306211818692,0.125896817975577,0.304130793658544,0.183546752161682,1.56478268869608,0.65407546914134,0.878744730937887,1.74986909166855,0.979904951377538,1.43752564364972,2.18117387875057,3.62681071005672,4.7053131879945,0.257259436035947,0.573066879877513,0,0.606949382578793,0,0.633831403506179,1.35537812827653,1.77858959222228,5.39939830368839,2.96659908770092,4.2628806896766,3.29560121570245,3.07374644257244,0.414758449233911,0.810035629990144,0.420649922702764,2.28520787523043,2.20868540951614,0.734944795289724,0.575072826109418,0,2.20231761998777,3.44755812830007,1.53606533256243,0.659431438650969,0.640413505216868,0,3.07101298901519,1.12552522006336,4.73674568108111,0.589257170947335,1.13897344639282,0.372798891650601,0.757261933331841,0.755715601067855,0.869593466105033,1.72084775396277,0.679971333707751,2.15881276655127,0.649776417447669,1.79210754838934,0.702222100658759,0.340860645156116,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.1418387971906,1.8125651855302,0.593768556259299,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,0.823120949949934,1.0053327306374,1.48316980640624,0.578397427679647,0,0.970601099684455,0.441683036920787,0.484875253135222,1.86391761218122,0.585561594023094,1.8850203613211,1.53274233125155,3.71426885968353,0.599902730993408,3.04968544975355,2.54644086988199,6.8625090422794,2.26177833803156,2.9550134432687,3.3243009452943,2.0778804455956,5.51620294430376,0.101839363850316,1.11966273549084,2.0217820674694,1.26265113531884,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0.862271971731369,0.567318240503458,0.175951124163949,0,0.556094498451196,1.0447564995665,1.02891068203972,0.199034266818493,2.80885274925294,3.3455227924913,3.40996199274711,0.621377317606506,0.703578179943289,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.536546802799238,0.350296027101508,0.16455984991348,0.656669856316381,0.648550476366846,1.31579988682799,0.439100230582101,0.402619256281115,4.6263788684108,0.92614151141356,1.32167513193519,1.58670339998127,0,0.696710015581316,1.03093969057675,0.201683524623343,1.11189021922435,0.760902504450237,3.32170343081158,1.4822905925161,0.754005626400808,0.994782360205754,1.9496408711912,1.79763881730844,1.94524244887225,0.796565093017469,0.189667900953082,0.228497025219458,2.25415471346161,0.610953983535943,0.387904974335251,0.631222379012867,1.3279672796094,1.03327103585722,1.72698600625512,0.987177311374404,2.37162101669719,0.667380422864376,0.589676985339609,0.224862112384854,0.811440485554012,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,1.37280706594041,1.43768206527355,0.372140947668503,1.24815069245824,0.757736633841335,1.4351793081753,0.964887042726734,0.739012760666419,0.568474235311454,0,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,1.17080188714679,0.157635144106191,0.221464689648775,0.956728611944923,1.47476983244164,1.55416483679306,1.73578870297814,1.50791283939272,1.08781136763742,0,0.827810238914197,3.53211297973142,3.16471553798949,0.983609672260053,0.504941854408746,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,0.321321316421807,0.851640511249612,0.35613120733451,0.651547837414304,1.81467135269789,0,0.485561272309963,0.604647113929502,0.943025398779491,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,0.540183282093931,0.646793418913773,1.28602221018955,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,1.17335854031855,0.21183207086382,2.64634077665954,1.48397627647332,0.484393280087717,0.603129249281559,1.3130957840345,0.984845398470368,1.1659233465194,2.41052892613663,1.36696704638282,0.619160603889667,0.555583582109135,1.50694765603753,0.820165366326151,0.915112692826091,2.71965487990169,2.6590775941495,2.48759952847963,0.954670618015114,0.158167996790568,1.42323626988794,0.756037385752609,0.836353184057875,0.436725127492355,0.944050424693745,0.909188012978695,1.30877970992015,0.90730481304255,1.24267862617385,0.56369293868419,0.149516546043979,0.827292452285488,1.75006069509643,1.6790777052105,1.18269287843545,0.821500670520278,0.5208175393758,1.36317147753424,1.20792060413003,0.864090018773596,4.4241556887945,1.01362607645082,1.54066435747241,2.07873316764472,2.14832034800978,2.58285761215644,4.32703618271888,4.87375439676105,3.63479219813331,4.26758117267999,5.24296162711571,5.26272555994663,5.48407497349878,5.02570679380746,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.772758376128762,0.750729901804728,0.183151624267265,0.643105137237198,0,2.82375921308533,5.9842280745933,2.86447756719698,2.57779773515531,2.05524755931193,3.0215755895588,4.05013500139084,3.15224842256954,4.98456649882625,4.14208249401456,0.31136204275253,0.798049746802062,0.512200817262403,0.243106717068294,0,1.10306105070008,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,1.2673964994512,0.565879024158229,0.655490552289177,0.960377286073039,1.20614484806788,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,1.4198064492747,0.476872379894642,0.581385666529314,0.941093804153306,1.09998990259179,0.73171189149109,0.263069711437843,1.49384525230448,0,1.89816028998679,0.394017929502254,0,1.54936841185966,0.771626443924566,0.499621155875892,0.935726433781634,0.859484216193193,1.14772999241306,0.661774257358546,0.927471342481686
|short_description=p5@Ppp6r1
}}

Latest revision as of 17:46, 26 September 2015

Short description:p5@Ppp6r1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ppp6r1_5end
Coexpression cluster:NA
Association with transcript: 163bp_to_ENSMUST00000064099, NM_172894, uc009eyb.1_5end
EntrezGene:Ppp6r1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ppp6r1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D34.27
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G75.48
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.90e-1048
immune system1.90e-1048
hematopoietic system8.70e-1045
blood island8.70e-1045
gland of gut1.20e-0724
thymus1.23e-0723
neck1.23e-0723
respiratory system epithelium1.23e-0723
hemolymphoid system gland1.23e-0723
pharyngeal epithelium1.23e-0723
thymic region1.23e-0723
pharyngeal gland1.23e-0723
entire pharyngeal arch endoderm1.23e-0723
thymus primordium1.23e-0723
early pharyngeal endoderm1.23e-0723
occipital lobe2.87e-0710
visual cortex2.87e-0710
neocortex2.87e-0710
pharynx5.23e-0724
upper respiratory tract5.23e-0724
chordate pharynx5.23e-0724
pharyngeal arch system5.23e-0724
pharyngeal region of foregut5.23e-0724
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