FFCP PHASE1:Mm9::chr1:173177227..173177252,-: Difference between revisions
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{{FFCP|EntrezGene=226646|HGNC=|MCL_coexpression_id=79|UniProt=Q91WD5,D3YXT0|association_with_transcript=0bp_to_ENSMUST00000013737,ENSMUST00000111318,ENSMUST00000136976,NM_153064,uc007dnm.1,uc011wvz.1_5end|description=CAGE_peak_1_at_Ndufs2_5end|id=chr1:173177227..173177252,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.30e-08!18;UBERON:0000948!3.30e-08!18;UBERON:0005498!3.30e-08!18;UBERON:0004140!3.30e-08!18;UBERON:0009881!3.30e-08!18;UBERON:0004141!3.30e-08!18;UBERON:0003084!3.30e-08!18;UBERON:0007005!3.30e-08!18;UBERON:0004139!3.30e-08!18;UBERON:0004291!3.30e-08!18;UBERON:0004535!5.90e-07!23;UBERON:0001009!5.90e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.30e-08,18;UBERON:0000948,3.30e-08,18;UBERON:0005498,3.30e-08,18;UBERON:0004140,3.30e-08,18;UBERON:0009881,3.30e-08,18;UBERON:0004141,3.30e-08,18;UBERON:0003084,3.30e-08,18;UBERON:0007005,3.30e-08,18;UBERON:0004139,3.30e-08,18;UBERON:0004291,3.30e-08,18;UBERON:0004535,5.90e-07,23;UBERON:0001009,5.90e-07,23;UBERON:0010314,8.05e-07,92|phase1_expression=92.0855870852565,235.209424748929,261.169563409594,190.249988911996,211.878893767305,159.653187588207,130.823078733494,76.4410074774132,25.0603925429967,26.6833560007073,38.1816069142876,47.8632953972018,65.741080293583,65.914983423924,64.9564035540542,55.4782232648123,58.7631977627643,61.9883154928937,60.878808520948,77.6633062790395,144.403506676516,98.0001688352738,76.792738006847,163.512256094862,191.097931128953,264.146703492909,270.08777159174,226.675736785555,188.693255520179,209.689067960262,223.060893719237,98.4297543862428,76.8830984480713,31.6963362030877,273.542483904457,297.560015191701,284.612082629743,58.1758966724302,71.1015163516658,64.916944252751,70.5877785637217,68.3045484958446,60.203283775863,125.141437067724,111.007739685368,135.273956343159,293.396754130515,194.042389178597,207.383756501341,144.850274810341,170.643447961317,217.066372191107,54.0259991505911,52.9514363668281,60.832977644786,121.940972681039,127.793914212685,140.778481191742,146.07248474063,156.581329864522,139.442908771359,233.125038063563,206.316392697784,192.128589639579,168.107281636386,193.961071380285,221.404481673101,231.299419803576,129.197256936363,131.900801750062,137.342199762452,220.522559959736,234.12065340871,113.303989273832,110.797364497081,139.721255564723,221.332920808771,181.699082095222,189.550462038204,137.953056965783,111.431949907735,107.829067705249,232.55943816815,182.335085650264,160.743756661204,162.929607766938,142.229309118304,141.849978273054,100.791563326468,107.084900671315,59.4222201838439,218.547664753272,173.392690095476,279.026550076751,304.095363365509,267.920078484207,269.653286652964,102.087763224257,134.04957837508,119.075436609985,95.7735254481427,88.5452694158793,50.9610479413291,14.2213340630666,93.0911476348221,87.1557937234339,83.4115334274392,221.973462173853,59.2967753552023,182.13850463254,141.390541314401,190.290923945088,211.24379548655,221.562281612355,147.926593576717,279.356832525869,78.8551947072653,419.482734424664,113.230150649584,172.766995743833,212.228699240438,178.918968406897,160.296914647585,123.553496338873,157.713370230532,199.256503062701,85.7876291462389,79.1871604911298,86.6618948638301,168.514469330426,122.610161555392,108.942323281853,138.016510232668,150.104973452904,150.230756216562,158.834196543335,92.5719817399375,127.392737904735,81.1240054572096,102.274741960826,93.8168393761094,100.697121741861,75.4460323884413,82.8876498096433,76.6771345435465,79.4305065766069,86.2992883195103,107.103195485952,92.0475329823236,74.318689505953,78.4742013771212,94.0349692114296,83.692222016905,68.2574246383446,74.2873512432676,84.3905291310411,51.2615626738661,48.3814065375664,89.5115023096117,162.179479895298,176.598123165765,206.891308618706,180.636233251515,246.742346611244,299.895267453063,376.23992260616,411.531397747016,441.606524832635,439.868478818733,477.563153006088,571.697244917375,695.03474022003,629.230630424151,732.096014337828,126.38425908704,88.9095850957017,197.260013441327,182.735341564509,98.7524599978133,92.8946687441754,87.1144038537351,115.564659609175,132.982070219232,139.625609566618,222.554129864376,144.276284338234,148.287773192159,127.133185634295,124.19212349488,183.359159365461,187.175551191485,217.661411667023,93.1269393679631,111.620796819705,99.1828073923108,125.449217952714,144.106697965546,156.823693274752,176.176992428181,268.502859174896,294.843610886102,341.3165554077,214.038796756921,75.2471426779584,79.9995110110736,71.2812896259986,80.9411884340127,95.7473324217095,113.05387819095,99.8305596954313,94.8491076633957,179.563164225005,135.142114135713,153.322070439423,195.959658715944,225.805516884718,255.461916855203,267.756154356669,71.8689909748092,118.053149533012,76.1046439984261,99.6403653500354,85.1925601287263,88.2757976718369,87.8381034869391,92.4933490845966,66.6796659569188,75.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226646 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=Q91WD5,D3YXT0 | |||
|association_with_transcript=0bp_to_ENSMUST00000013737,ENSMUST00000111318,ENSMUST00000136976,NM_153064,uc007dnm.1,uc011wvz.1_5end | |||
|cluster_id=chr1:173177227..173177252,- | |||
|description=CAGE_peak_1_at_Ndufs2_5end | |||
|id=chr1:173177227..173177252,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.30e-08!18;UBERON:0000948!3.30e-08!18;UBERON:0005498!3.30e-08!18;UBERON:0004140!3.30e-08!18;UBERON:0009881!3.30e-08!18;UBERON:0004141!3.30e-08!18;UBERON:0003084!3.30e-08!18;UBERON:0007005!3.30e-08!18;UBERON:0004139!3.30e-08!18;UBERON:0004291!3.30e-08!18;UBERON:0004535!5.90e-07!23;UBERON:0001009!5.90e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.30e-08,18;UBERON:0000948,3.30e-08,18;UBERON:0005498,3.30e-08,18;UBERON:0004140,3.30e-08,18;UBERON:0009881,3.30e-08,18;UBERON:0004141,3.30e-08,18;UBERON:0003084,3.30e-08,18;UBERON:0007005,3.30e-08,18;UBERON:0004139,3.30e-08,18;UBERON:0004291,3.30e-08,18;UBERON:0004535,5.90e-07,23;UBERON:0001009,5.90e-07,23;UBERON:0010314,8.05e-07,92 | |||
|phase1_expression=92.0855870852565,235.209424748929,261.169563409594,190.249988911996,211.878893767305,159.653187588207,130.823078733494,76.4410074774132,25.0603925429967,26.6833560007073,38.1816069142876,47.8632953972018,65.741080293583,65.914983423924,64.9564035540542,55.4782232648123,58.7631977627643,61.9883154928937,60.878808520948,77.6633062790395,144.403506676516,98.0001688352738,76.792738006847,163.512256094862,191.097931128953,264.146703492909,270.08777159174,226.675736785555,188.693255520179,209.689067960262,223.060893719237,98.4297543862428,76.8830984480713,31.6963362030877,273.542483904457,297.560015191701,284.612082629743,58.1758966724302,71.1015163516658,64.916944252751,70.5877785637217,68.3045484958446,60.203283775863,125.141437067724,111.007739685368,135.273956343159,293.396754130515,194.042389178597,207.383756501341,144.850274810341,170.643447961317,217.066372191107,54.0259991505911,52.9514363668281,60.832977644786,121.940972681039,127.793914212685,140.778481191742,146.07248474063,156.581329864522,139.442908771359,233.125038063563,206.316392697784,192.128589639579,168.107281636386,193.961071380285,221.404481673101,231.299419803576,129.197256936363,131.900801750062,137.342199762452,220.522559959736,234.12065340871,113.303989273832,110.797364497081,139.721255564723,221.332920808771,181.699082095222,189.550462038204,137.953056965783,111.431949907735,107.829067705249,232.55943816815,182.335085650264,160.743756661204,162.929607766938,142.229309118304,141.849978273054,100.791563326468,107.084900671315,59.4222201838439,218.547664753272,173.392690095476,279.026550076751,304.095363365509,267.920078484207,269.653286652964,102.087763224257,134.04957837508,119.075436609985,95.7735254481427,88.5452694158793,50.9610479413291,14.2213340630666,93.0911476348221,87.1557937234339,83.4115334274392,221.973462173853,59.2967753552023,182.13850463254,141.390541314401,190.290923945088,211.24379548655,221.562281612355,147.926593576717,279.356832525869,78.8551947072653,419.482734424664,113.230150649584,172.766995743833,212.228699240438,178.918968406897,160.296914647585,123.553496338873,157.713370230532,199.256503062701,85.7876291462389,79.1871604911298,86.6618948638301,168.514469330426,122.610161555392,108.942323281853,138.016510232668,150.104973452904,150.230756216562,158.834196543335,92.5719817399375,127.392737904735,81.1240054572096,102.274741960826,93.8168393761094,100.697121741861,75.4460323884413,82.8876498096433,76.6771345435465,79.4305065766069,86.2992883195103,107.103195485952,92.0475329823236,74.318689505953,78.4742013771212,94.0349692114296,83.692222016905,68.2574246383446,74.2873512432676,84.3905291310411,51.2615626738661,48.3814065375664,89.5115023096117,162.179479895298,176.598123165765,206.891308618706,180.636233251515,246.742346611244,299.895267453063,376.23992260616,411.531397747016,441.606524832635,439.868478818733,477.563153006088,571.697244917375,695.03474022003,629.230630424151,732.096014337828,126.38425908704,88.9095850957017,197.260013441327,182.735341564509,98.7524599978133,92.8946687441754,87.1144038537351,115.564659609175,132.982070219232,139.625609566618,222.554129864376,144.276284338234,148.287773192159,127.133185634295,124.19212349488,183.359159365461,187.175551191485,217.661411667023,93.1269393679631,111.620796819705,99.1828073923108,125.449217952714,144.106697965546,156.823693274752,176.176992428181,268.502859174896,294.843610886102,341.3165554077,214.038796756921,75.2471426779584,79.9995110110736,71.2812896259986,80.9411884340127,95.7473324217095,113.05387819095,99.8305596954313,94.8491076633957,179.563164225005,135.142114135713,153.322070439423,195.959658715944,225.805516884718,255.461916855203,267.756154356669,71.8689909748092,118.053149533012,76.1046439984261,99.6403653500354,85.1925601287263,88.2757976718369,87.8381034869391,92.4933490845966,66.6796659569188,75.0765297909347,81.3219320153184,93.2382260732549,87.5512858060091,90.9842578477708,94.9985088817415,111.500665182835,102.778733060979,93.818493743609,187.844190285717,193.047647817359,114.918396709049,597.851155619955,118.946598719929,120.255133243365,108.142545661865,114.943991815178,116.969303893257,125.402903139453,133.99234225439,113.395272869589,111.866441158866,131.420418416519,95.2417971747482,114.318117554378,81.7692535954952,75.8862565673663,94.2490482213736,105.124015455107,108.534156950346,100.903717669405,94.4966057218473,80.548008761309,86.8319065045223,73.0702796249786,105.879721380262,87.542181948221,90.6600033744989,99.0101215182594,80.6841865636478,97.5931129649701,113.18884830991,103.739124955291,84.4139512137222,119.863845428591,102.678588855723,118.436865205579,96.2154003061212,92.9942791092171,74.0975417464672,96.2935717178243,88.805434682748,87.7553057704668,87.499928154299,72.7144185870621,170.516289428463,163.915966977291,64.4183220607905,85.2377764688109,74.4482000026241,64.7987492096137,57.9583525537147,73.6665717725003,73.7706386173332,71.0953377804183,63.7101879238394,187.115441130962,83.0381983150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| |||
|short_description=p1@Ndufs2 | |||
}} |
Latest revision as of 18:48, 26 September 2015
Short description: | p1@Ndufs2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndufs2_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000013737, ENSMUST00000111318, ENSMUST00000136976, NM_153064, uc007dnm.1, uc011wvz.1_5end |
EntrezGene: | Ndufs2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.30e-08 | 18 |
heart | 3.30e-08 | 18 |
primitive heart tube | 3.30e-08 | 18 |
primary heart field | 3.30e-08 | 18 |
anterior lateral plate mesoderm | 3.30e-08 | 18 |
heart tube | 3.30e-08 | 18 |
heart primordium | 3.30e-08 | 18 |
cardiac mesoderm | 3.30e-08 | 18 |
cardiogenic plate | 3.30e-08 | 18 |
heart rudiment | 3.30e-08 | 18 |
cardiovascular system | 5.90e-07 | 23 |
circulatory system | 5.90e-07 | 23 |
structure with developmental contribution from neural crest | 8.05e-07 | 92 |