Personal tools

FFCP PHASE1:Mm9::chr2:57090838..57090870,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14571
|EntrezGene=14571
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q64521
|UniProt=Q64521
|association_with_transcript=45bp_to_ENSMUST00000028167,NM_010274,uc008jsc.2_5end
|association_with_transcript=45bp_to_ENSMUST00000028167,NM_010274,uc008jsc.2_5end
|cluster_id=chr2:57090838..57090870,+
|description=CAGE_peak_1_at_Gpd2_5end
|description=CAGE_peak_1_at_Gpd2_5end
|id=chr2:57090838..57090870,+
|id=chr2:57090838..57090870,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.11e-14!130;UBERON:0000925!1.11e-14!130;UBERON:0006595!1.11e-14!130;UBERON:0001007!5.74e-14!128;UBERON:0001555!5.74e-14!128;UBERON:0007026!5.74e-14!128;UBERON:0004921!5.12e-13!126;UBERON:0004185!5.12e-13!126;UBERON:0005409!3.48e-10!59;UBERON:0000344!1.16e-08!15;UBERON:0000160!1.23e-08!43;UBERON:0004923!9.87e-08!24;UBERON:0001242!1.40e-07!13;UBERON:0000060!1.40e-07!13;UBERON:0001262!1.40e-07!13;UBERON:0004786!1.40e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.78e-16,118;UBERON:0000925,7.78e-16,118;UBERON:0006595,7.78e-16,118;UBERON:0001007,4.25e-15,116;UBERON:0001555,4.25e-15,116;UBERON:0007026,4.25e-15,116;UBERON:0004921,4.18e-14,114;UBERON:0005409,1.50e-12,47;UBERON:0000160,1.15e-11,31;UBERON:0000344,1.16e-08,15;UBERON:0004923,9.87e-08,24;UBERON:0001242,1.40e-07,13;UBERON:0001262,1.40e-07,13;UBERON:0004786,1.40e-07,13
|phase1_expression=3.36312578920067,44.6688521778382,42.7699285026164,65.6347338535821,55.5994260240445,16.6200479192771,18.221785966451,10.5881125222093,21.11830832275,23.8745816848433,8.38968044304974,8.45584885350566,17.6336751829142,18.5331253128274,11.6588416635482,13.3633676477285,4.89693314689703,31.861678701182,37.0208970735495,25.0389894560838,7.313722952992,9.73051321768676,12.5375898786689,35.8383027057231,40.8348520299563,33.3054539186712,27.5687677541808,32.3206849028834,48.4559719613753,45.8694836163074,27.4945833212578,10.7955214488137,11.6862309641068,47.5445043046316,14.4425809875637,22.7741464141135,18.5794114198756,50.6423273191658,37.5040965371424,56.0170406051964,59.4113802911324,53.2775478267588,50.49307671524,11.4566104357775,9.22530074097583,8.81024410376071,3.9119567217402,9.59310688073965,10.3252505885202,16.7209713203884,12.5987779462826,10.062679505548,40.100042847799,19.5847778343063,13.4437519656986,7.46052364504246,9.45560351797897,5.67239301505187,1.01158230429799,1.05798195854407,0,8.13226876965917,4.4464739805557,2.2497492932035,3.9554654502679,1.4209602298922,1.79760066311043,3.84218305321555,2.90330914463737,2.16009501330705,1.68259969081106,3.14216082844184,1.54607978666129,1.34739879136449,1.34183659425531,1.83843757322004,11.0115880999389,9.44886301830389,10.1380311949121,0.791317726381163,0.731901148819277,0.52091337055676,8.37548997004143,7.87867654044352,7.79271063661732,1.76777151284201,2.42031857358475,0.931997229126503,15.7510482133023,18.3638891059489,14.4932244350839,10.3250865237766,9.51959867190851,9.71465744948071,9.74664626171504,10.3046184032387,17.4151080963372,13.2935651610885,8.57293815189467,10.9535268098205,7.04217098883402,15.3991772897181,5.09610479413291,7.11066703153331,12.3399893376392,13.1747130047051,18.1988800205322,21.6949371466214,36.7691794778984,5.19547486726887,2.25530924795977,1.52232739156071,2.99800146432876,4.22023393547343,3.88042733547826,18.8499886994513,5.19109432242185,105.991328622295,22.1152637987469,8.7354098971601,16.1214308476087,16.9706338597328,29.8226817948995,13.1751358655196,10.0534419270458,67.6961196302767,12.8202183221335,7.7987355029143,14.6130761134024,10.3355541189328,8.6925114535539,2.1361239859187,8.34356736922927,5.8814555185976,7.06479351502504,9.73447578406546,3.25885964321012,13.0627319140598,6.06534620240819,29.6723016799928,3.3831315170303,3.67843367093557,1.0803727788321,1.9591626318643,2.31324097114515,3.20284300712124,2.24884138943349,14.7460921321239,5.6047678162539,2.83659120251729,1.23165786914764,2.41115305670332,3.05851974148158,3.48252166522167,3.08673204611915,1.79130840136644,7.72434506044558,8.4924809347856,9.09323198065896,4.76389276831654,5.39409937956521,5.40186184383045,3.07768156260773,3.54175617145327,2.00547246753592,5.11574678450897,4.56064782379353,4.67061369468678,6.08871444679878,10.9992200932994,10.701082860053,9.64919917007193,11.6361561104257,9.5286557319864,6.51898840548794,1.9551876352064,100.447310027075,45.4854974661296,4.47905326123991,4.41249676534833,7.98978260196979,12.9077455758939,13.5650606745371,11.6037631928661,47.4529061544512,25.3636390274977,20.1068167040216,20.2935601481974,16.9618755793635,58.4232615625244,46.685818772934,50.7810246798636,4.1726938209678,4.34144347916969,10.1436962105772,4.88763186828754,5.62462212786115,5.96154469067708,7.58838445491087,11.3659813944294,17.7408562460754,16.4118228015995,11.858105083486,8.3422552858047,6.2898878436225,6.2961391467759,6.28866376304359,5.788251834058,5.0925170356284,4.60313819921297,13.619359049103,16.1991233780968,20.1275489138296,23.4448797031157,22.1546747911338,20.4588891137161,18.8367284198008,14.473305640901,16.812540305161,2.27389694124582,3.58522948172457,4.92260748748046,5.86725620721255,6.86775655511445,5.71304738126433,8.78101415360095,10.4039195110086,10.6303051031412,9.24837658213425,19.6635977658886,17.2684981865896,12.150520920847,6.03165135757089,15.2293591469239,8.35999264132362,10.7615331058846,19.4266213885228,15.9407893765396,5.57378814280696,57.3109004753927,1.89304931649754,3.90438744296638,4.73931475012158,5.01834475700359,6.46116154838943,7.64306633129848,8.09621403349789,5.26060544240361,5.13874111330481,8.03303291054518,6.38730383437209,2.84904965867608,3.4206261464251,5.77395430403874,3.98235415019888,6.06951590387454,8.76738315197778,7.54420319023592,7.08724542913855,7.07100840271033,12.1461297789064,7.99774204850512,9.9819265947722,11.3773232856894,7.37930260024991,16.5016869197099,6.80879211507576,3.96134406868882,4.39819524861365,4.92975180572662,7.62563004661776,2.85390108163313,6.41741180348272,3.65357938937519,15.0189893160775,23.9370240076117,9.2621927183084,13.0260139823769,7.75029248140347,6.57410881716899,4.65552141612232,5.9090723908222,42.8476829845881,14.4631735568198,18.1123133645724,6.3979929068599,4.8150577116125,11.8672127912955,18.8638034255015,11.4389086603261,21.0773253192381,22.112329467138,24.5995953371874,33.413471630529,4.11236791655476,7.1161813494397,9.39646465149671,12.5452977608681,17.0322799722019,19.4204658794142,20.9939777542353,39.0016353556204,23.9787700589817,18.0188400795208,0,1.49516546043979,0.992750942742586,1.94451188344048,1.80823752868824,2.53434188236167,2.93393096614385,3.6457227756306,2.09718688851422,2.41584120826006,6.04863013141517,16.1165671520371,15.0016659314722,11.0927833738013,10.133824192268,12.1738153053887,11.3248372225321,9.61563596159751,11.6674726467916,9.08698049533329,10.592746125045,9.78013995827353,12.4746087346883,10.3908788971556,10.5189211963412,15.8711268530648,5.32766288097755,13.008509208374,6.88326927092722,8.88672132548076,11.6363134779733,15.7510396869848,14.5770497773765,10.0314420807073,7.90652579663893,1.38097570952153,5.72895513439397,3.43706364687375,2.05524755931193,5.2877572817279,4.72515750162264,7.20513925158753,4.07828168085784,6.21312374102184,1.86817225651518,5.98537310101547,3.24393850932855,4.132814190161,2.30574478890781,4.96377472815038,10.4455962066759,8.85950746127245,8.02298023979538,9.6024940470243,10.3926512954998,9.61994341068989,9.92599979180754,8.00314405060866,8.50044940543076,10.9547548995107,7.88013416425017,6.94473193669338,11.5384052224926,9.12633304833263,11.6575545811041,10.6485483695602,5.96090474868302,9.01147783120437,11.2931256498397,10.7460552022429,10.0610385080025,11.5750673032651,9.91370031074791,8.41713407486608,9.84670650430645,10.0474572023075,10.6400071224119,11.1554525653896,6.36591816237767,4.99621155875892,8.4215379040347,11.6030369186081,11.8598765882683,14.559033661888,22.02744438394
|phase1_expression=3.36312578920067,44.6688521778382,42.7699285026164,65.6347338535821,55.5994260240445,16.6200479192771,18.221785966451,10.5881125222093,21.11830832275,23.8745816848433,8.38968044304974,8.45584885350566,17.6336751829142,18.5331253128274,11.6588416635482,13.3633676477285,4.89693314689703,31.861678701182,37.0208970735495,25.0389894560838,7.313722952992,9.73051321768676,12.5375898786689,35.8383027057231,40.8348520299563,33.3054539186712,27.5687677541808,32.3206849028834,48.4559719613753,45.8694836163074,27.4945833212578,10.7955214488137,11.6862309641068,47.5445043046316,14.4425809875637,22.7741464141135,18.5794114198756,50.6423273191658,37.5040965371424,56.0170406051964,59.4113802911324,53.2775478267588,50.49307671524,11.4566104357775,9.22530074097583,8.81024410376071,3.9119567217402,9.59310688073965,10.3252505885202,16.7209713203884,12.5987779462826,10.062679505548,40.100042847799,19.5847778343063,13.4437519656986,7.46052364504246,9.45560351797897,5.67239301505187,1.01158230429799,1.05798195854407,0,8.13226876965917,4.4464739805557,2.2497492932035,3.9554654502679,1.4209602298922,1.79760066311043,3.84218305321555,2.90330914463737,2.16009501330705,1.68259969081106,3.14216082844184,1.54607978666129,1.34739879136449,1.34183659425531,1.83843757322004,11.0115880999389,9.44886301830389,10.1380311949121,0.791317726381163,0.731901148819277,0.52091337055676,8.37548997004143,7.87867654044352,7.79271063661732,1.76777151284201,2.42031857358475,0.931997229126503,15.7510482133023,18.3638891059489,14.4932244350839,10.3250865237766,9.51959867190851,9.71465744948071,9.74664626171504,10.3046184032387,17.4151080963372,13.2935651610885,8.57293815189467,10.9535268098205,7.04217098883402,15.3991772897181,5.09610479413291,7.11066703153331,12.3399893376392,13.1747130047051,18.1988800205322,21.6949371466214,36.7691794778984,5.19547486726887,2.25530924795977,1.52232739156071,2.99800146432876,4.22023393547343,3.88042733547826,18.8499886994513,5.19109432242185,105.991328622295,22.1152637987469,8.7354098971601,16.1214308476087,16.9706338597328,29.8226817948995,13.1751358655196,10.0534419270458,67.6961196302767,12.8202183221335,7.7987355029143,14.6130761134024,10.3355541189328,8.6925114535539,2.1361239859187,8.34356736922927,5.8814555185976,7.06479351502504,9.73447578406546,3.25885964321012,13.0627319140598,6.06534620240819,29.6723016799928,3.3831315170303,3.67843367093557,1.0803727788321,1.9591626318643,2.31324097114515,3.20284300712124,2.24884138943349,14.7460921321239,5.6047678162539,2.83659120251729,1.23165786914764,2.41115305670332,3.05851974148158,3.48252166522167,3.08673204611915,1.79130840136644,7.72434506044558,8.4924809347856,9.09323198065896,4.76389276831654,5.39409937956521,5.40186184383045,3.07768156260773,3.54175617145327,2.00547246753592,5.11574678450897,4.56064782379353,4.67061369468678,6.08871444679878,10.9992200932994,10.701082860053,9.64919917007193,11.6361561104257,9.5286557319864,6.51898840548794,1.9551876352064,100.447310027075,45.4854974661296,4.47905326123991,4.41249676534833,7.98978260196979,12.9077455758939,13.5650606745371,11.6037631928661,47.4529061544512,25.3636390274977,20.1068167040216,20.2935601481974,16.9618755793635,58.4232615625244,46.685818772934,50.7810246798636,4.1726938209678,4.34144347916969,10.1436962105772,4.88763186828754,5.62462212786115,5.96154469067708,7.58838445491087,11.3659813944294,17.7408562460754,16.4118228015995,11.858105083486,8.3422552858047,6.2898878436225,6.2961391467759,6.28866376304359,5.788251834058,5.0925170356284,4.60313819921297,13.619359049103,16.1991233780968,20.1275489138296,23.4448797031157,22.1546747911338,20.4588891137161,18.8367284198008,14.473305640901,16.812540305161,2.27389694124582,3.58522948172457,4.92260748748046,5.86725620721255,6.86775655511445,5.71304738126433,8.78101415360095,10.4039195110086,10.6303051031412,9.24837658213425,19.6635977658886,17.2684981865896,12.150520920847,6.03165135757089,15.2293591469239,8.35999264132362,10.7615331058846,19.4266213885228,15.9407893765396,5.57378814280696,57.3109004753927,1.89304931649754,3.90438744296638,4.73931475012158,5.01834475700359,6.46116154838943,7.64306633129848,8.09621403349789,5.26060544240361,5.13874111330481,8.03303291054518,6.38730383437209,2.84904965867608,3.4206261464251,5.77395430403874,3.98235415019888,6.06951590387454,8.76738315197778,7.54420319023592,7.08724542913855,7.07100840271033,12.1461297789064,7.99774204850512,9.9819265947722,11.3773232856894,7.37930260024991,16.5016869197099,6.80879211507576,3.96134406868882,4.39819524861365,4.92975180572662,7.62563004661776,2.85390108163313,6.41741180348272,3.65357938937519,15.0189893160775,23.9370240076117,9.2621927183084,13.0260139823769,7.75029248140347,6.57410881716899,4.65552141612232,5.9090723908222,42.8476829845881,14.4631735568198,18.1123133645724,6.3979929068599,4.8150577116125,11.8672127912955,18.8638034255015,11.4389086603261,21.0773253192381,22.112329467138,24.5995953371874,33.413471630529,4.11236791655476,7.1161813494397,9.39646465149671,12.5452977608681,17.0322799722019,19.4204658794142,20.9939777542353,39.0016353556204,23.9787700589817,18.0188400795208,0,1.49516546043979,0.992750942742586,1.94451188344048,1.80823752868824,2.53434188236167,2.93393096614385,3.6457227756306,2.09718688851422,2.41584120826006,6.04863013141517,16.1165671520371,15.0016659314722,11.0927833738013,10.133824192268,12.1738153053887,11.3248372225321,9.61563596159751,11.6674726467916,9.08698049533329,10.592746125045,9.78013995827353,12.4746087346883,10.3908788971556,10.5189211963412,15.8711268530648,5.32766288097755,13.008509208374,6.88326927092722,8.88672132548076,11.6363134779733,15.7510396869848,14.5770497773765,10.0314420807073,7.90652579663893,1.38097570952153,5.72895513439397,3.43706364687375,2.05524755931193,5.2877572817279,4.72515750162264,7.20513925158753,4.07828168085784,6.21312374102184,1.86817225651518,5.98537310101547,3.24393850932855,4.132814190161,2.30574478890781,4.96377472815038,10.4455962066759,8.85950746127245,8.02298023979538,9.6024940470243,10.3926512954998,9.61994341068989,9.92599979180754,8.00314405060866,8.50044940543076,10.9547548995107,7.88013416425017,6.94473193669338,11.5384052224926,9.12633304833263,11.6575545811041,10.6485483695602,5.96090474868302,9.01147783120437,11.2931256498397,10.7460552022429,10.0610385080025,11.5750673032651,9.91370031074791,8.41713407486608,9.84670650430645,10.0474572023075,10.6400071224119,11.1554525653896,6.36591816237767,4.99621155875892,8.4215379040347,11.6030369186081,11.8598765882683,14.559033661888,22.02744438394
|short_description=p1@Gpd2
|short_description=p1@Gpd2
}}
}}

Latest revision as of 19:01, 26 September 2015

Short description:p1@Gpd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpd2_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 45bp_to_ENSMUST00000028167, NM_010274, uc008jsc.2_5end
EntrezGene:Gpd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I544.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I642.77
CD326+ enterocyte, pool1.CNhs13542.11848-124I365.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I455.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A437.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D135.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D240.83
GP2+ M cell, pool1.CNhs13228.11845-124H933.31
GP2+ M cell, pool2.CNhs13231.11846-124I127.57
GP2+ M cell, pool3.CNhs13240.11847-124I232.32
Ileum epithelium, pool1.CNhs13199.10252-104B948.46
Ileum epithelium, pool2.CNhs13232.10253-104C145.87
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.77
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G850.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H137.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H356.02
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G959.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H253.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.10
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D915.75
Mouse Schwann, donor2.CNhs12573.11746-123F918.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.69
accessory axillary lymph node, adult.CNhs10475.1063-29H936.77
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I318.85
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H1105.99
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A616.12
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H767.70
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.61
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.06
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G429.67
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A214.75
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.49
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G111.00
heart, neonate N16.CNhs11209.782-15G110.70
heart, neonate N20.CNhs11127.821-26I69.65
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I3100.45
intestine, adult.CNhs10496.178-9A345.49
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H412.91
intestine, embryo E17.CNhs10582.482-18D313.57
intestine, embryo E18.CNhs10526.1289-20F711.60
intestine, neonate N00.CNhs11126.644-26D147.45
intestine, neonate N01.CNhs11192.1322-23E925.36
intestine, neonate N06.CNhs11102.688-20B820.11
intestine, neonate N07.CNhs11095.720-20F220.29
intestine, neonate N10.CNhs11098.755-23A516.96
intestine, neonate N20.CNhs11187.827-18D158.42
intestine, neonate N25.CNhs11121.1352-25E346.69
intestine, neonate N30.CNhs11131.1384-42G150.78
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F84.34
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D57.59
kidney, neonate N20.CNhs11113.832-19I111.37
kidney, neonate N25.CNhs11122.1353-25F317.74
kidney, neonate N30.CNhs11203.1385-42H116.41
liver, adult pregnant day01.CNhs10466.508-5B211.86
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F413.62
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B922.15
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H118.84
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B116.81
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A419.66
lung, neonate N25.CNhs11119.1359-25C717.27
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H210.76
medulla oblongata, adult.CNhs10477.17-12C219.43
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C257.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G912.15
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B611.38
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G323.94
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C313.03
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H36.57
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I142.85
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G218.11
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D111.87
spleen, neonate N20.CNhs11112.824-19H118.86
spleen, neonate N25.CNhs11099.1354-25G311.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D324.60
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G87.12
stomach, embryo E16.CNhs11022.459-17D49.40
stomach, embryo E17.CNhs11006.1035-18D512.55
stomach, embryo E18.CNhs10999.1286-20C617.03
stomach, neonate N03.CNhs11193.1340-24B819.42
stomach, neonate N07.CNhs11210.718-18A920.99
stomach, neonate N25.CNhs11104.1355-25E439.00
stomach, neonate N30.CNhs11134.1386-42I123.98
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B516.12
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I211.09
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C112.17
thymus, embryo E18.CNhs10595.1273-19G411.32
thymus, neonate N02.CNhs11181.1541-43F89.62
thymus, neonate N03.CNhs11137.2104-43C711.67
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D310.59
thymus, neonate N10.CNhs11194.748-24E49.78
thymus, neonate N20.CNhs11186.820-7A212.47
thymus, neonate N25.CNhs11125.1362-25G710.39
thymus, neonate N30.CNhs11132.1393-42G210.52
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F511.64
uterus, adult.CNhs10509.92-27E515.75
vagina, adult.CNhs10502.89-27D514.58
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C211.60
whole body, neonate N01.CNhs10576.659-23C611.86
whole body, neonate N06.CNhs10515.692-21D114.56
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure7.78e-16118
endoderm7.78e-16118
presumptive endoderm7.78e-16118
digestive system4.25e-15116
digestive tract4.25e-15116
primitive gut4.25e-15116
subdivision of digestive tract4.18e-14114
gastrointestinal system1.50e-1247
intestine1.15e-1131
mucosa1.16e-0815
organ component layer9.87e-0824
intestinal mucosa1.40e-0713
wall of intestine1.40e-0713
gastrointestinal system mucosa1.40e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:57090838..57090870,%2B&oldid=4269274"