FFCP PHASE1:Mm9::chr15:41662467..41662547,+: Difference between revisions
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{{FFCP|EntrezGene=170719|HGNC=|MCL_coexpression_id=1|UniProt=B1H3M0,Q4KMM3|association_with_transcript=0bp_to_ENSMUST00000166917,NM_001130164,uc011zso.1_5end|description=CAGE_peak_1_at_Oxr1_5end|id=chr15:41662467..41662547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.34e-14!94;UBERON:0007811!5.64e-14!86;UBERON:0000033!5.23e-13!63;UBERON:0002346!3.37e-11!71;UBERON:0003075!3.37e-11!71;UBERON:0007284!3.37e-11!71;UBERON:0000477!1.30e-10!154;UBERON:0000025!1.53e-10!114;UBERON:0000955!1.72e-10!50;UBERON:0006238!1.72e-10!50;UBERON:0003056!1.79e-10!49;UBERON:0002616!5.13e-10!49;UBERON:0004111!5.27e-10!122;UBERON:0001049!4.97e-09!52;UBERON:0005068!4.97e-09!52;UBERON:0006241!4.97e-09!52;UBERON:0007135!4.97e-09!52;UBERON:0001017!4.17e-08!73;UBERON:0005743!4.17e-08!73;UBERON:0003080!7.53e-08!40;UBERON:0000073!1.11e-07!75;UBERON:0001016!1.11e-07!75;UBERON:0004121!1.49e-07!102;UBERON:0000924!1.49e-07!102;UBERON:0006601!1.49e-07!102;UBERON:0000483!1.51e-07!181;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0002780!2.56e-07!39;UBERON:0001890!2.56e-07!39;UBERON:0006240!2.56e-07!39;UBERON:0000119!7.36e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.20e-15,92;UBERON:0002346,1.01e-11,64;UBERON:0003075,1.01e-11,64;UBERON:0007284,1.01e-11,64;UBERON:0000025,1.53e-10,114;UBERON:0003056,1.79e-10,49;UBERON:0000073,4.00e-10,54;UBERON:0004111,5.26e-10,122;UBERON:0010371,2.30e-09,73;UBERON:0001049,4.97e-09,52;UBERON:0005068,4.97e-09,52;UBERON:0006241,4.97e-09,52;UBERON:0007135,4.97e-09,52;UBERON:0000955,7.77e-09,47;UBERON:0006238,7.77e-09,47;UBERON:0002616,2.19e-08,46;UBERON:0001017,4.17e-08,73;UBERON:0003080,7.53e-08,40;UBERON:0001016,1.11e-07,75;UBERON:0004121,1.20e-07,95;UBERON:0000924,1.20e-07,95;UBERON:0006601,1.20e-07,95;UBERON:0000483,1.96e-07,174;UBERON:0002021,2.41e-07,10;UBERON:0000411,2.41e-07,10;UBERON:0001950,2.41e-07,10;UBERON:0002780,2.56e-07,39;UBERON:0001890,2.56e-07,39;UBERON:0006240,2.56e-07,39;UBERON:0000119,9.53e-07,176|phase1_expression=17.2960754873177,2.09385244583617,1.36499771816861,1.81478526784098,2.50447864973174,4.53274034162102,4.90586545250604,37.3166404746155,1.40788722151667,2.57470978954193,3.5955773327356,2.55270908785077,40.4033722637646,35.8423649917889,5.99597571268193,8.50396123037269,6.29605690315332,18.9277299214943,21.8011949433125,8.91218268775863,17.6890043514225,48.5532751372329,47.5383616232862,7.03966660290989,5.04700418347774,1.72269589234506,2.58457197695445,2.15471232685889,7.9809836171677,7.05684363327806,2.88249663851896,1.90509202037889,2.46025915033828,0,6.64358725427932,5.31950865147176,5.10423390655923,0.418531630736908,0,1.57057123192139,0,0,0.971020706062307,38.1467358465999,32.2378641278056,14.1330999164495,2.34717403304412,2.8343270329458,3.51497892375155,2.91644848611425,4.61955191363696,4.31257693094915,9.2280433331755,8.70434570413613,17.8129713545506,5.65970759279083,15.7593391966316,13.9231464914909,9.5088736604011,14.8117474196169,5.70448263155561,2.37191172448392,1.77858959222228,0.899899717281399,1.97773272513395,0,3.89480143673926,3.45796474789399,19.2862678893768,11.6105106965254,12.8298226424343,11.7116903605559,12.1477697523387,17.7611658861683,9.00947427571422,9.19218786610021,81.4857519395476,73.9309687513237,78.9537580937091,10.8146755938759,11.8933936683133,9.37644067002168,37.4105218661851,68.6570384238649,59.7441148807328,19.4454866412621,29.7556812870125,16.2167517868012,7.79979791331796,12.9983083383671,21.4499721639242,22.371020801516,1.3599426674155,5.39703191637817,16.2444104361917,17.0250217096988,20.0835520788405,29.3140154834259,24.4198844326697,19.0803370235584,17.7462708918617,5.13305909657271,10.1922095882658,0,0.432982082022428,0.760079596425296,1.01104889002957,11.7609396110632,31.0725460376606,24.3445108066313,10.9295755862666,9.13396434936424,15.4512383161559,13.7157602902887,15.0513545133702,14.2003248202533,4.94389935468748,33.6916501623394,5.30766331169925,22.8091258425847,17.0047969214503,18.9101348722737,7.45567044872489,48.3088315069053,37.281513812795,11.240110429178,11.2626217035565,4.79922184794726,7.11593271609162,87.4777334124165,42.0900554593136,23.2460551408799,52.842593338452,42.4487659168349,90.1800113388491,77.5513237463881,16.1924588522003,14.1823946495506,10.867078612648,14.7309299120532,21.7301139747715,25.749035696549,23.7682011343061,25.921228667743,27.4867456571365,37.2810926028913,31.0152708292702,31.3031078594209,8.62271971731369,15.695804653929,18.1229657888867,15.7820927347854,22.2437799380478,12.537077994798,19.3435208223467,14.927570011387,2.1066395619397,2.05878325691772,1.70498099637356,14.7059298500206,18.7620847984877,16.9258337773354,20.3600472603281,17.1184881620241,18.9748548851475,19.7653853037847,18.2425912951741,19.6165775176845,22.5446994381468,30.3709808546326,29.5901154842373,37.1347968060344,28.7610651031276,34.625256040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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170719 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1H3M0,Q4KMM3 | |||
|association_with_transcript=0bp_to_ENSMUST00000166917,NM_001130164,uc011zso.1_5end | |||
|cluster_id=chr15:41662467..41662547,+ | |||
|description=CAGE_peak_1_at_Oxr1_5end | |||
|id=chr15:41662467..41662547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.34e-14!94;UBERON:0007811!5.64e-14!86;UBERON:0000033!5.23e-13!63;UBERON:0002346!3.37e-11!71;UBERON:0003075!3.37e-11!71;UBERON:0007284!3.37e-11!71;UBERON:0000477!1.30e-10!154;UBERON:0000025!1.53e-10!114;UBERON:0000955!1.72e-10!50;UBERON:0006238!1.72e-10!50;UBERON:0003056!1.79e-10!49;UBERON:0002616!5.13e-10!49;UBERON:0004111!5.27e-10!122;UBERON:0001049!4.97e-09!52;UBERON:0005068!4.97e-09!52;UBERON:0006241!4.97e-09!52;UBERON:0007135!4.97e-09!52;UBERON:0001017!4.17e-08!73;UBERON:0005743!4.17e-08!73;UBERON:0003080!7.53e-08!40;UBERON:0000073!1.11e-07!75;UBERON:0001016!1.11e-07!75;UBERON:0004121!1.49e-07!102;UBERON:0000924!1.49e-07!102;UBERON:0006601!1.49e-07!102;UBERON:0000483!1.51e-07!181;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0002780!2.56e-07!39;UBERON:0001890!2.56e-07!39;UBERON:0006240!2.56e-07!39;UBERON:0000119!7.36e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.20e-15,92;UBERON:0002346,1.01e-11,64;UBERON:0003075,1.01e-11,64;UBERON:0007284,1.01e-11,64;UBERON:0000025,1.53e-10,114;UBERON:0003056,1.79e-10,49;UBERON:0000073,4.00e-10,54;UBERON:0004111,5.26e-10,122;UBERON:0010371,2.30e-09,73;UBERON:0001049,4.97e-09,52;UBERON:0005068,4.97e-09,52;UBERON:0006241,4.97e-09,52;UBERON:0007135,4.97e-09,52;UBERON:0000955,7.77e-09,47;UBERON:0006238,7.77e-09,47;UBERON:0002616,2.19e-08,46;UBERON:0001017,4.17e-08,73;UBERON:0003080,7.53e-08,40;UBERON:0001016,1.11e-07,75;UBERON:0004121,1.20e-07,95;UBERON:0000924,1.20e-07,95;UBERON:0006601,1.20e-07,95;UBERON:0000483,1.96e-07,174;UBERON:0002021,2.41e-07,10;UBERON:0000411,2.41e-07,10;UBERON:0001950,2.41e-07,10;UBERON:0002780,2.56e-07,39;UBERON:0001890,2.56e-07,39;UBERON:0006240,2.56e-07,39;UBERON:0000119,9.53e-07,176 | |||
|phase1_expression=17.2960754873177,2.09385244583617,1.36499771816861,1.81478526784098,2.50447864973174,4.53274034162102,4.90586545250604,37.3166404746155,1.40788722151667,2.57470978954193,3.5955773327356,2.55270908785077,40.4033722637646,35.8423649917889,5.99597571268193,8.50396123037269,6.29605690315332,18.9277299214943,21.8011949433125,8.91218268775863,17.6890043514225,48.5532751372329,47.5383616232862,7.03966660290989,5.04700418347774,1.72269589234506,2.58457197695445,2.15471232685889,7.9809836171677,7.05684363327806,2.88249663851896,1.90509202037889,2.46025915033828,0,6.64358725427932,5.31950865147176,5.10423390655923,0.418531630736908,0,1.57057123192139,0,0,0.971020706062307,38.1467358465999,32.2378641278056,14.1330999164495,2.34717403304412,2.8343270329458,3.51497892375155,2.91644848611425,4.61955191363696,4.31257693094915,9.2280433331755,8.70434570413613,17.8129713545506,5.65970759279083,15.7593391966316,13.9231464914909,9.5088736604011,14.8117474196169,5.70448263155561,2.37191172448392,1.77858959222228,0.899899717281399,1.97773272513395,0,3.89480143673926,3.45796474789399,19.2862678893768,11.6105106965254,12.8298226424343,11.7116903605559,12.1477697523387,17.7611658861683,9.00947427571422,9.19218786610021,81.4857519395476,73.9309687513237,78.9537580937091,10.8146755938759,11.8933936683133,9.37644067002168,37.4105218661851,68.6570384238649,59.7441148807328,19.4454866412621,29.7556812870125,16.2167517868012,7.79979791331796,12.9983083383671,21.4499721639242,22.371020801516,1.3599426674155,5.39703191637817,16.2444104361917,17.0250217096988,20.0835520788405,29.3140154834259,24.4198844326697,19.0803370235584,17.7462708918617,5.13305909657271,10.1922095882658,0,0.432982082022428,0.760079596425296,1.01104889002957,11.7609396110632,31.0725460376606,24.3445108066313,10.9295755862666,9.13396434936424,15.4512383161559,13.7157602902887,15.0513545133702,14.2003248202533,4.94389935468748,33.6916501623394,5.30766331169925,22.8091258425847,17.0047969214503,18.9101348722737,7.45567044872489,48.3088315069053,37.281513812795,11.240110429178,11.2626217035565,4.79922184794726,7.11593271609162,87.4777334124165,42.0900554593136,23.2460551408799,52.842593338452,42.4487659168349,90.1800113388491,77.5513237463881,16.1924588522003,14.1823946495506,10.867078612648,14.7309299120532,21.7301139747715,25.749035696549,23.7682011343061,25.921228667743,27.4867456571365,37.2810926028913,31.0152708292702,31.3031078594209,8.62271971731369,15.695804653929,18.1229657888867,15.7820927347854,22.2437799380478,12.537077994798,19.3435208223467,14.927570011387,2.1066395619397,2.05878325691772,1.70498099637356,14.7059298500206,18.7620847984877,16.9258337773354,20.3600472603281,17.1184881620241,18.9748548851475,19.7653853037847,18.2425912951741,19.6165775176845,22.5446994381468,30.3709808546326,29.5901154842373,37.1347968060344,28.7610651031276,34.6252560401759,46.4740786326721,31.3859067756818,6.93879444265976,8.19796756656987,16.8497717922835,17.4177503895329,13.1444810548535,9.68080918192044,7.11609740303585,9.89173255785308,10.4396393539793,6.91735609840846,10.304743560811,11.5394753783867,11.307917052909,4.49409704327111,9.29393614461185,9.95706366271836,7.2073802362171,10.1681176222659,12.3978509240388,11.8117770150282,10.2794818198842,7.64480436804472,11.3825766823663,9.44704947069454,11.1469096767376,7.52722699922983,12.7474629647474,7.34118465150814,7.86235980452812,7.42044970870017,8.11440485554012,10.8529721888588,12.2220408855082,8.0554918486227,7.29608520487659,5.21666685057355,10.0637744569148,13.0249331683976,12.4815069245824,14.1444171650383,22.0658818631952,7.71909634181387,28.6367444758237,15.9172785887207,14.5038829033403,16.1257831486429,11.7345124144251,15.410575684647,15.7108802984769,8.19561321002755,27.7437853626896,25.6899039992579,25.9911272911704,25.0710871515079,32.1194066270566,25.7475324275091,13.5712155545345,5.98296252200581,6.39293554924747,8.00216564283724,62.1330783252755,63.8803691927507,17.5410391553043,30.2965112645248,13.2513452154828,14.4462335389756,20.6806461823487,12.9043150894378,20.0518806674155,13.8707500086528,14.1683745586213,14.9050487534769,15.8115111178609,43.6996990333658,21.0071326108238,8.01295216502649,17.9175655288934,15.1772513134733,2.65490276679926,12.867373716214,5.44182402536552,8.48722858901541,2.36241514304618,7.68587869859819,5.94385074286909,12.7236805317127,14.6163925137736,6.95280867458795,11.5960469432499,3.09406629744561,41.8740715077159,21.4272701897259,5.56242340265844,15.2179294872431,23.0542303734956,17.658512942605,20.7331765958672,8.82948352432338,5.63212099352905,5.08396970073168,7.93902232997863,6.43056386471772,13.0786185623683,11.4594557363496,9.31104283224465,6.89391778929257,7.28702091574627,68.2365111398676,10.2522528478712,10.7321171340876,15.3711457716861,8.85331747922048,6.97140561377228,10.066239621087,21.4172821792258,22.2522809194616,18.5187964897928,9.54670618015114,13.6024477239888,11.3858901591035,13.2846569210816,13.1725626489115,12.2283035697859,9.979961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| |||
|short_description=p1@Oxr1 | |||
}} |
Latest revision as of 19:06, 26 September 2015
Short description: | p1@Oxr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Oxr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000166917, NM_001130164, uc011zso.1_5end |
EntrezGene: | Oxr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.20e-15 | 92 |
neurectoderm | 1.01e-11 | 64 |
neural plate | 1.01e-11 | 64 |
presumptive neural plate | 1.01e-11 | 64 |
tube | 1.53e-10 | 114 |
pre-chordal neural plate | 1.79e-10 | 49 |
regional part of nervous system | 4.00e-10 | 54 |
anatomical conduit | 5.26e-10 | 122 |
ecto-epithelium | 2.30e-09 | 73 |
neural tube | 4.97e-09 | 52 |
neural rod | 4.97e-09 | 52 |
future spinal cord | 4.97e-09 | 52 |
neural keel | 4.97e-09 | 52 |
brain | 7.77e-09 | 47 |
future brain | 7.77e-09 | 47 |
regional part of brain | 2.19e-08 | 46 |
central nervous system | 4.17e-08 | 73 |
anterior neural tube | 7.53e-08 | 40 |
nervous system | 1.11e-07 | 75 |
ectoderm-derived structure | 1.20e-07 | 95 |
ectoderm | 1.20e-07 | 95 |
presumptive ectoderm | 1.20e-07 | 95 |
epithelium | 1.96e-07 | 174 |
occipital lobe | 2.41e-07 | 10 |
visual cortex | 2.41e-07 | 10 |
neocortex | 2.41e-07 | 10 |
regional part of forebrain | 2.56e-07 | 39 |
forebrain | 2.56e-07 | 39 |
future forebrain | 2.56e-07 | 39 |
cell layer | 9.53e-07 | 176 |