FFCP PHASE1:Mm9::chr4:154999306..154999325,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:154999306..154999325,+
|short_description=p5@Cdk11b
|description=CAGE_peak_5_at_Cdk11b_5end
|association_with_transcript=314bp_to_ENSMUST00000105600,uc008w...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12537 | |EntrezGene=12537 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P24788 | |UniProt=P24788 | ||
|association_with_transcript=314bp_to_ENSMUST00000105600,uc008wec.1_5end | |||
|cluster_id=chr4:154999306..154999325,+ | |||
|description=CAGE_peak_5_at_Cdk11b_5end | |||
|id=chr4:154999306..154999325,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.12e-13,3;CL:0000239,2.26e-11,6;CL:0000677,2.26e-11,6;CL:0000584,2.26e-11,6;CL:0000075,9.16e-10,7;CL:0000066,1.76e-09,25;CL:0002563,1.29e-07,9;CL:0002251,1.29e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.79e-10!15;UBERON:0004923!1.19e-08!24;UBERON:0001242!1.32e-08!13;UBERON:0000060!1.32e-08!13;UBERON:0001262!1.32e-08!13;UBERON:0004786!1.32e-08!13;UBERON:0000160!3.36e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.82e-21,15;UBERON:0000160,3.79e-17,31;UBERON:0001242,5.89e-15,13;UBERON:0001262,5.89e-15,13;UBERON:0004786,5.89e-15,13;UBERON:0004923,1.18e-12,24;UBERON:0005409,1.31e-10,47;UBERON:0002108,1.58e-09,4;UBERON:0001962,4.71e-09,2;UBERON:0001961,4.71e-09,2;UBERON:0001744,4.71e-09,2;UBERON:0003350,1.29e-07,9;UBERON:0004808,1.29e-07,9;UBERON:0001277,1.29e-07,9 | |||
|phase1_expression=0,5.58360652222978,3.18499467572675,3.62957053568196,1.00179145989269,0.33575854382378,0.233612640595526,0.129123323441576,0.703943610758334,0.936258105287974,0,0.0797721589953364,0.684802919724823,0.34968160967599,0,0,0.699561878128147,0,0.137114433605739,0.42438965179803,0,0,0.522399578277871,2.23989391910769,1.37645568640302,3.44539178469012,1.7230479846363,1.50829862880122,2.28028103347649,1.00812051903972,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.335565212115473,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0.289864488701678,0,0,1.07940638327563,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0.260240885925407,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0,0,7.59963200862735,3.70230793328962,0,0,0,0.201683524623343,0.667134131534611,0,0.949058123089023,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,1.72910439899755,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.590440591918409,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,5.75072826109418,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0,1.45740418314925,0.18542530201051,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0,0.509935289981566,0.279902904647316,1.10559979043539,0,0,0,0,0,0,0.269728692769641,0,0,0.388844919875379,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0.25984164595559,0,0,0,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0.538283139656854,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,3.18499467572675,3.62957053568196,1.00179145989269,0.33575854382378,0.233612640595526,0.129123323441576,0.703943610758334,0.936258105287974,0,0.0797721589953364,0.684802919724823,0.34968160967599,0,0,0.699561878128147,0,0.137114433605739,0.42438965179803,0,0,0.522399578277871,2.23989391910769,1.37645568640302,3.44539178469012,1.7230479846363,1.50829862880122,2.28028103347649,1.00812051903972,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.335565212115473,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0.289864488701678,0,0,1.07940638327563,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0.260240885925407,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0,0,7.59963200862735,3.70230793328962,0,0,0,0.201683524623343,0.667134131534611,0,0.949058123089023,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,1.72910439899755,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.590440591918409,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,5.75072826109418,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0,1.45740418314925,0.18542530201051,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0,0.509935289981566,0.279902904647316,1.10559979043539,0,0,0,0,0,0,0.269728692769641,0,0,0.388844919875379,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0.25984164595559,0,0,0,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0.538283139656854,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Cdk11b | |||
}} | }} |
Latest revision as of 20:05, 26 September 2015
Short description: | p5@Cdk11b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdk11b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 314bp_to_ENSMUST00000105600, uc008wec.1_5end |
EntrezGene: | Cdk11b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.12e-13 | 3 |
brush border epithelial cell | 2.26e-11 | 6 |
gut absorptive cell | 2.26e-11 | 6 |
enterocyte | 2.26e-11 | 6 |
columnar/cuboidal epithelial cell | 9.16e-10 | 7 |
epithelial cell | 1.76e-09 | 25 |
intestinal epithelial cell | 1.29e-07 | 9 |
epithelial cell of alimentary canal | 1.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.82e-21 | 15 |
intestine | 3.79e-17 | 31 |
intestinal mucosa | 5.89e-15 | 13 |
wall of intestine | 5.89e-15 | 13 |
gastrointestinal system mucosa | 5.89e-15 | 13 |
organ component layer | 1.18e-12 | 24 |
gastrointestinal system | 1.31e-10 | 47 |
small intestine | 1.58e-09 | 4 |
gut-associated lymphoid tissue | 4.71e-09 | 2 |
mucosa-associated lymphoid tissue | 4.71e-09 | 2 |
lymphoid tissue | 4.71e-09 | 2 |
epithelium of mucosa | 1.29e-07 | 9 |
gastrointestinal system epithelium | 1.29e-07 | 9 |
intestinal epithelium | 1.29e-07 | 9 |