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FFCP PHASE1:Mm9::chr9:56266431..56266488,+: Difference between revisions

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{{FFCP|EntrezGene=66867|HGNC=|MCL_coexpression_id=1|UniProt=Q9DC33|association_with_transcript=0bp_to_ENSMUST00000034879_5end|description=CAGE_peak_2_at_Hmg20a_5end|id=chr9:56266431..56266488,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.21e-14!94;UBERON:0000955!1.49e-12!50;UBERON:0006238!1.49e-12!50;UBERON:0007811!2.04e-12!86;UBERON:0002616!3.39e-12!49;UBERON:0000033!3.66e-12!63;UBERON:0001049!3.53e-10!52;UBERON:0005068!3.53e-10!52;UBERON:0006241!3.53e-10!52;UBERON:0007135!3.53e-10!52;UBERON:0003080!7.91e-10!40;UBERON:0003056!1.43e-09!49;UBERON:0002780!2.86e-09!39;UBERON:0001890!2.86e-09!39;UBERON:0006240!2.86e-09!39;UBERON:0002791!1.13e-08!29;UBERON:0003528!1.13e-08!29;UBERON:0001893!1.13e-08!29;UBERON:0002346!1.30e-08!71;UBERON:0003075!1.30e-08!71;UBERON:0007284!1.30e-08!71;UBERON:0000477!1.90e-08!154;UBERON:0004111!6.85e-08!122;UBERON:0000475!1.03e-07!200;UBERON:0000025!1.21e-07!114;UBERON:0002020!1.37e-07!34;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.13e-11,54;UBERON:0000955,5.82e-11,47;UBERON:0006238,5.82e-11,47;UBERON:0002616,1.29e-10,46;UBERON:0001049,3.53e-10,52;UBERON:0005068,3.53e-10,52;UBERON:0006241,3.53e-10,52;UBERON:0007135,3.53e-10,52;UBERON:0003080,7.91e-10,40;UBERON:0003056,1.43e-09,49;UBERON:0002780,2.86e-09,39;UBERON:0001890,2.86e-09,39;UBERON:0006240,2.86e-09,39;UBERON:0003528,1.13e-08,29;UBERON:0002791,1.13e-08,29;UBERON:0001893,1.13e-08,29;UBERON:0010314,1.21e-08,92;UBERON:0002346,2.38e-08,64;UBERON:0003075,2.38e-08,64;UBERON:0007284,2.38e-08,64;UBERON:0004111,6.85e-08,122;UBERON:0010371,7.02e-08,73;UBERON:0000025,1.21e-07,114;UBERON:0002020,1.37e-07,34;UBERON:0002021,2.02e-07,10;UBERON:0000411,2.02e-07,10;UBERON:0001950,2.02e-07,10|phase1_expression=9.12848428497326,6.63053274514786,4.54999239389536,7.25914107136392,11.520601788766,5.03637815735669,5.84031601488814,22.854828249159,3.94208422024667,2.34064526321993,3.76679530096111,4.06838010876216,25.1665072998872,28.8487327982691,3.66420737997229,8.30148596298286,1.39912375625629,12.4607555316504,13.9856722277854,14.429248161133,13.2667532635669,9.33334941288322,9.40319240900167,6.39969691173627,6.42345986988076,2.8711598205751,3.4460959692726,5.60225204983311,3.80046838912748,4.53654233567875,4.21287970245079,3.81018404075779,1.23012957516914,0,6.35473563452804,4.98703936075477,5.51257261908397,5.4409111995798,6.2506827561904,5.75876118371178,6.47054636834116,3.41522742479223,6.79714494243615,13.8486499773135,11.0500855029271,8.25960384727567,7.82391344348039,1.96222640742402,1.09843091367236,3.4997381833371,2.2397827460058,1.43752564364972,13.5903910906766,18.859415692295,14.452033363126,5.14518872071894,8.5960031981627,9.28209766099396,9.3065571995415,14.8117474196169,6.33831403506179,1.69422266034566,0.889294796111139,3.5995988691256,0,2.8419204597844,0.898800331555214,2.68952813725088,10.3689612308478,11.6105106965254,11.567872874326,5.99867067247988,4.8591079009355,9.92175473641128,10.2554653989513,6.43453150627015,19.82085857989,23.4944702076745,19.2008166570304,13.4524013484798,15.5528994124096,13.022834263919,13.1216009530649,7.31591393041184,15.279824777681,10.0173719061047,10.2507610175354,9.87917062874093,5.75519069332199,7.17929821014462,22.3195656300292,5.16254326188832,2.03991400112325,8.09554787456726,6.49776417447669,5.37632264516803,8.56710962803686,5.28333999991979,5.71529210126311,3.88673531961374,6.33795388995062,8.98285341900225,0,0,6.49473123033642,6.58735650235256,5.05524445014783,8.33542321949138,38.3228067797814,10.3909497345377,5.89850111004862,7.30717147949139,9.68585088475446,13.2635923686308,10.8181610564848,9.92766071504436,8.40462890296871,13.013942122792,6.19227386364912,5.3383060482645,5.52103796150984,7.75800405016355,5.59175283654366,14.6390398505774,16.9651832518899,5.8755122697976,5.15205035375457,1.79970819298022,3.68503658511888,25.314618059415,18.3000241127451,12.062817802835,26.2474723490337,28.8958466783273,22.4411088124325,22.3892943033506,4.9901288286655,9.33052279575698,9.35074206204597,12.416069497302,10.2795149940536,5.0578462975364,8.10279584124071,11.0014517020072,7.48401490664606,10.3772113430728,8.80796210861451,11.3829483125167,6.46703978798527,12.6701073712439,13.724187684788,9.42541649438572,11.3999372182495,10.7958171621872,14.8163138213719,9.35461054046918,0,3.60287069960601,1.98914449576915,9.52778553663309,9.61556845922494,10.8037236876609,10.180023630164,8.06733350164356,10.4901636763417,15.5797742982773,7.51165523918934,6.889155199663,7.40519324610662,9.02921052435024,10.5389452409612,10.2339991197733,8.34290438105992,9.26024289446565,28.1788531075931,13.5834088340655,9.25172592354634,6.08236303326152,12.5840067815788,8.12828351511535,10.6959992897337,7.46229041106367,5.33707305227689,5.89699440948933,7.59246498471219,4.6115707322723,5.52937459360593,4.575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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66867
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9DC33
|association_with_transcript=0bp_to_ENSMUST00000034879_5end
|cluster_id=chr9:56266431..56266488,+
|description=CAGE_peak_2_at_Hmg20a_5end
|id=chr9:56266431..56266488,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.21e-14!94;UBERON:0000955!1.49e-12!50;UBERON:0006238!1.49e-12!50;UBERON:0007811!2.04e-12!86;UBERON:0002616!3.39e-12!49;UBERON:0000033!3.66e-12!63;UBERON:0001049!3.53e-10!52;UBERON:0005068!3.53e-10!52;UBERON:0006241!3.53e-10!52;UBERON:0007135!3.53e-10!52;UBERON:0003080!7.91e-10!40;UBERON:0003056!1.43e-09!49;UBERON:0002780!2.86e-09!39;UBERON:0001890!2.86e-09!39;UBERON:0006240!2.86e-09!39;UBERON:0002791!1.13e-08!29;UBERON:0003528!1.13e-08!29;UBERON:0001893!1.13e-08!29;UBERON:0002346!1.30e-08!71;UBERON:0003075!1.30e-08!71;UBERON:0007284!1.30e-08!71;UBERON:0000477!1.90e-08!154;UBERON:0004111!6.85e-08!122;UBERON:0000475!1.03e-07!200;UBERON:0000025!1.21e-07!114;UBERON:0002020!1.37e-07!34;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.13e-11,54;UBERON:0000955,5.82e-11,47;UBERON:0006238,5.82e-11,47;UBERON:0002616,1.29e-10,46;UBERON:0001049,3.53e-10,52;UBERON:0005068,3.53e-10,52;UBERON:0006241,3.53e-10,52;UBERON:0007135,3.53e-10,52;UBERON:0003080,7.91e-10,40;UBERON:0003056,1.43e-09,49;UBERON:0002780,2.86e-09,39;UBERON:0001890,2.86e-09,39;UBERON:0006240,2.86e-09,39;UBERON:0003528,1.13e-08,29;UBERON:0002791,1.13e-08,29;UBERON:0001893,1.13e-08,29;UBERON:0010314,1.21e-08,92;UBERON:0002346,2.38e-08,64;UBERON:0003075,2.38e-08,64;UBERON:0007284,2.38e-08,64;UBERON:0004111,6.85e-08,122;UBERON:0010371,7.02e-08,73;UBERON:0000025,1.21e-07,114;UBERON:0002020,1.37e-07,34;UBERON:0002021,2.02e-07,10;UBERON:0000411,2.02e-07,10;UBERON:0001950,2.02e-07,10
|phase1_expression=9.12848428497326,6.63053274514786,4.54999239389536,7.25914107136392,11.520601788766,5.03637815735669,5.84031601488814,22.854828249159,3.94208422024667,2.34064526321993,3.76679530096111,4.06838010876216,25.1665072998872,28.8487327982691,3.66420737997229,8.30148596298286,1.39912375625629,12.4607555316504,13.9856722277854,14.429248161133,13.2667532635669,9.33334941288322,9.40319240900167,6.39969691173627,6.42345986988076,2.8711598205751,3.4460959692726,5.60225204983311,3.80046838912748,4.53654233567875,4.21287970245079,3.81018404075779,1.23012957516914,0,6.35473563452804,4.98703936075477,5.51257261908397,5.4409111995798,6.2506827561904,5.75876118371178,6.47054636834116,3.41522742479223,6.79714494243615,13.8486499773135,11.0500855029271,8.25960384727567,7.82391344348039,1.96222640742402,1.09843091367236,3.4997381833371,2.2397827460058,1.43752564364972,13.5903910906766,18.859415692295,14.452033363126,5.14518872071894,8.5960031981627,9.28209766099396,9.3065571995415,14.8117474196169,6.33831403506179,1.69422266034566,0.889294796111139,3.5995988691256,0,2.8419204597844,0.898800331555214,2.68952813725088,10.3689612308478,11.6105106965254,11.567872874326,5.99867067247988,4.8591079009355,9.92175473641128,10.2554653989513,6.43453150627015,19.82085857989,23.4944702076745,19.2008166570304,13.4524013484798,15.5528994124096,13.022834263919,13.1216009530649,7.31591393041184,15.279824777681,10.0173719061047,10.2507610175354,9.87917062874093,5.75519069332199,7.17929821014462,22.3195656300292,5.16254326188832,2.03991400112325,8.09554787456726,6.49776417447669,5.37632264516803,8.56710962803686,5.28333999991979,5.71529210126311,3.88673531961374,6.33795388995062,8.98285341900225,0,0,6.49473123033642,6.58735650235256,5.05524445014783,8.33542321949138,38.3228067797814,10.3909497345377,5.89850111004862,7.30717147949139,9.68585088475446,13.2635923686308,10.8181610564848,9.92766071504436,8.40462890296871,13.013942122792,6.19227386364912,5.3383060482645,5.52103796150984,7.75800405016355,5.59175283654366,14.6390398505774,16.9651832518899,5.8755122697976,5.15205035375457,1.79970819298022,3.68503658511888,25.314618059415,18.3000241127451,12.062817802835,26.2474723490337,28.8958466783273,22.4411088124325,22.3892943033506,4.9901288286655,9.33052279575698,9.35074206204597,12.416069497302,10.2795149940536,5.0578462975364,8.10279584124071,11.0014517020072,7.48401490664606,10.3772113430728,8.80796210861451,11.3829483125167,6.46703978798527,12.6701073712439,13.724187684788,9.42541649438572,11.3999372182495,10.7958171621872,14.8163138213719,9.35461054046918,0,3.60287069960601,1.98914449576915,9.52778553663309,9.61556845922494,10.8037236876609,10.180023630164,8.06733350164356,10.4901636763417,15.5797742982773,7.51165523918934,6.889155199663,7.40519324610662,9.02921052435024,10.5389452409612,10.2339991197733,8.34290438105992,9.26024289446565,28.1788531075931,13.5834088340655,9.25172592354634,6.08236303326152,12.5840067815788,8.12828351511535,10.6959992897337,7.46229041106367,5.33707305227689,5.89699440948933,7.59246498471219,4.6115707322723,5.52937459360593,4.57599885694647,8.18849165900304,8.98819408654222,7.3486936957396,8.16479220342906,7.77638393907635,8.79713547094912,12.3978509240388,9.9789150644204,8.33995694820791,5.54072977133517,9.73842671713562,7.67572769493931,9.89091985400661,8.63780147452604,8.30067355844017,6.34011401721157,6.2898878436225,6.2961391467759,5.27436315610108,5.788251834058,3.8193877767213,8.0554918486227,4.53978634970099,4.94210543738547,20.1275489138296,9.30352369171258,7.48890415474945,7.82994521636046,5.74071723270119,10.6137574699941,9.97667226899665,6.82169082373745,11.4075483509418,7.97801903143384,10.7957514212711,15.9130944569725,12.1402256851867,8.97614780145875,10.0886492227962,11.2946991720875,8.13219320153184,10.4872521418072,11.0518388394173,13.1630643309176,12.0633027151418,10.3342079925555,10.3270497333998,11.0374698521893,21.9954308283275,23.7939723782172,3.93443868904021,10.0988370881749,4.41711507182759,1.95219372148319,4.73931475012158,5.73525115086125,4.45597348164788,4.24614796183249,3.64329631507405,8.76767573733936,4.34816555741176,12.8528526568723,8.94222536812092,7.30068975035746,5.53815661802159,9.23832688646199,11.9470624505967,7.76898035695941,5.44182402536552,7.92141334974772,4.42952839321159,7.37844355065426,6.20227903603731,6.18007340111759,8.55593708123331,8.21695570633122,5.27093042874994,3.09406629744561,9.53230896110606,9.54323798365944,8.14959707831353,9.64516657642165,13.3005175231705,12.1290795969408,10.0374902567294,3.34911444026059,7.74416636610244,9.53244318887191,6.61585194164886,12.036696464728,9.04200789497071,7.90099316558842,5.96861720015682,6.56563598980245,8.74442509889552,17.6154036909984,8.88528580148834,9.70018279427146,10.3708935327039,4.33247451110789,5.33107488111998,3.88922894451088,6.62915876976036,6.71766971153558,4.56059913554598,5.72802370809068,9.80641580101519,10.9792512248498,6.91234181259528,6.48173717644853,9.17122767733946,6.33862428008657,5.95104881222419,4.97336289769656,8.68420321055012,9.94142900939081,5.6369293868419,13.1574560518701,6.45288112782681,9.13920585217024,7.23295011475294,10.8131920314098,7.74557775061976,7.16124116641726,8.59846624290829,6.03960302065015,8.64090018773596,18.9606672376907,5.47358081283443,7.18976700153791,9.74406172333463,12.1738153053887,16.6892338016263,10.2166132091974,13.7351260272357,14.6401352424814,10.135505285115,13.6115349934735,19.296660386471,18.6650972782239,19.9859502730483,11.789979947991,4.21773311410723,5.29311753995907,8.562115434568,9.27310051354514,7.88266396894964,9.34073283763052,9.64657705855796,10.5330141847426,15.8130515932779,27.1591889539234,22.9158205375759,26.2935368985842,22.6077231524312,26.4387864086395,22.9507650078814,19.3638117386415,23.1102628581944,18.1216109113137,9.44464863016008,9.97562183502578,6.14640980714883,10.6966955510049,8.38452650511929,6.98605332110054,8.00088220085815,10.9198580336614,11.5530915453053,11.8767689528985,11.4065684950608,8.86543804514558,12.2670374785546,10.8202507564229,13.3250287977023,11.4310485907938,9.03897742369873,9.06673336179414,7.00546031365621,10.009526569139,9.60033906679163,8.16388708332953,12.8755542571553,12.2090989971156,12.4224382148236,9.30760686808441,9.87811053512972,7.3659519202596,11.1359373353607,5.05028044491965,5.81311588808453,6.30428687203606,5.72923460437565,8.83139994760006,10.2240503820005,11.9909077410214,8.65546951248011,4.94203424311086,6.69509162240952,6.83833399270498,6.72416723299222
|short_description=p2@Hmg20a
}}

Latest revision as of 21:07, 26 September 2015

Short description:p2@Hmg20a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Hmg20a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000034879_5end
EntrezGene:Hmg20a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Hmg20a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E828.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.26
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D95.76
Mouse Schwann, donor2.CNhs12573.11746-123F97.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.34
accessory axillary lymph node, adult.CNhs10475.1063-29H938.32
adrenal gland, adult.CNhs10508.49-24D710.39
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I19.69
adrenal gland, embryo E18.CNhs11026.1262-18F513.26
adrenal gland, neonate N00.CNhs11191.1311-23C110.82
adrenal gland, neonate N25.CNhs11223.1377-27I39.93
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H113.01
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I216.97
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A425.31
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F112.06
cortex, adult.CNhs10473.12-14D526.25
cortex, neonate N30.CNhs11107.1392-42F228.90
diencephalon, adult.CNhs10482.20-12F222.44
diencephalon, neonate N30.CNhs11201.1388-42B222.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C610.28
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D411.00
eyeball, neonate N00.CNhs11207.633-15C67.48
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H212.67
forelimb, embryo E13.CNhs10589.384-1E213.72
forelimb, embryo E14.CNhs10577.413-26A89.43
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B514.82
gonad, embryo E13.CNhs11044.1564-45I69.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F59.62
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C88.07
heart, embryo E16.CNhs11021.457-17C610.49
heart, embryo E17.CNhs11025.479-18E515.58
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G19.03
heart, neonate N16.CNhs11209.782-15G110.54
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D29.26
hippocampus, adult.CNhs10478.13-16E828.18
hippocampus, neonate N00.CNhs11228.627-43G113.58
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I512.58
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A58.19
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I97.78
kidney, embryo E15.CNhs10997.434-16F88.80
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I29.98
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G75.54
kidney, neonate N10.CNhs11206.758-6D59.74
kidney, neonate N20.CNhs11113.832-19I17.68
kidney, neonate N25.CNhs11122.1353-25F39.89
kidney, neonate N30.CNhs11203.1385-42H18.64
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A37.83
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B19.98
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F811.41
lung, embryo E15.CNhs11020.432-17C57.98
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A615.91
lung, embryo E18.CNhs10583.1287-20I612.14
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A410.49
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H213.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C222.00
medulla oblongata, neonate N30.CNhs11200.1396-42A323.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I78.94
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E57.92
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A59.65
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F612.13
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C312.04
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H37.90
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C917.62
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B86.34
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I18.68
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F513.16
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G59.14
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G510.81
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D98.60
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B518.96
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I27.19
thymus, embryo E16.CNhs11002.456-26C59.74
thymus, embryo E17.CNhs10581.478-18C112.17
thymus, embryo E18.CNhs10595.1273-19G416.69
thymus, neonate N02.CNhs11181.1541-43F810.22
thymus, neonate N03.CNhs11137.2104-43C713.74
thymus, neonate N06.CNhs11197.681-26C414.64
thymus, neonate N07.CNhs11211.713-19D310.14
thymus, neonate N10.CNhs11194.748-24E413.61
thymus, neonate N20.CNhs11186.820-7A219.30
thymus, neonate N25.CNhs11125.1362-25G718.67
thymus, neonate N30.CNhs11132.1393-42G219.99
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.29
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I89.44
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B46.72





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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