Personal tools

FFCP PHASE1:Mm9::chr12:82046510..82046528,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr12:82046510..82046528,+ |short_description=p1@Gm12966,p1@Srsf5 |description=CAGE_peak_1_at_Gm12966_5end,CAGE_peak_1_at_Srsf5_5end |association_with_transcrip...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr12:82046510..82046528,+
|DHSsupport=NA
|short_description=p1@Gm12966,p1@Srsf5
|DPIdataset=NA
|description=CAGE_peak_1_at_Gm12966_5end,CAGE_peak_1_at_Srsf5_5end
|association_with_transcript=0bp_to_ENSMUST00000021562,ENSMUST00000110351,ENSMUST00000110352,ENSMUST00000152662,ENSMUST00000153056_5end
|EntrezGene=20384,622469
|EntrezGene=20384,622469
|HGNC=
|HGNC=
|MCL_coexpression_id=298
|TSSclassifier=NA
|UniProt=E9QKW3,Q9D8S5,Q640L9
|UniProt=E9QKW3,Q9D8S5,Q640L9
|association_with_transcript=0bp_to_ENSMUST00000021562,ENSMUST00000110351,ENSMUST00000110352,ENSMUST00000152662,ENSMUST00000153056_5end
|cluster_id=chr12:82046510..82046528,+
|description=CAGE_peak_1_at_Gm12966_5end,CAGE_peak_1_at_Srsf5_5end
|id=chr12:82046510..82046528,+
|ontology_enrichment_celltype=CL:0000838!4.27e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000838,4.27e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!2.38e-13!128;UBERON:0001555!2.38e-13!128;UBERON:0007026!2.38e-13!128;UBERON:0004921!2.96e-13!126;UBERON:0004185!2.96e-13!126;UBERON:0004119!1.32e-12!130;UBERON:0000925!1.32e-12!130;UBERON:0006595!1.32e-12!130;UBERON:0005911!1.59e-11!69;UBERON:0000490!3.53e-10!66;UBERON:0003929!1.33e-09!55;UBERON:0003104!1.54e-09!131;UBERON:0009142!1.54e-09!131;UBERON:0001041!4.93e-09!92;UBERON:0000077!6.30e-09!97
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.54e-12,116;UBERON:0001555,1.54e-12,116;UBERON:0007026,1.54e-12,116;UBERON:0004921,1.84e-12,114;UBERON:0004119,8.62e-12,118;UBERON:0000925,8.62e-12,118;UBERON:0006595,8.62e-12,118;UBERON:0005911,1.59e-11,69;UBERON:0000490,3.53e-10,66;UBERON:0003929,1.33e-09,55;UBERON:0001041,1.75e-08,80
|phase1_expression=759.425832970933,749.948151016987,740.283762486775,1041.98920795203,1072.91865354508,569.614369597042,568.846779850105,779.259256969913,774.197183112015,668.020158122969,653.881420653204,542.689997645274,887.333383233439,822.625986762765,363.422750140888,586.773324895716,737.338219547067,648.747943059216,602.34370683001,569.106523061159,349.102706070141,518.695929073425,589.527924086577,488.136881942684,407.889701737428,543.797670016924,567.744310937661,522.302268030595,438.003981846942,414.337533325326,424.613927904909,210.830183588598,182.674241912617,206.02618532007,546.507264569412,386.495550458495,525.327753663076,857.152779749187,814.932764338324,971.66006881537,1097.05172517784,1047.79177392626,923.440691465254,398.463428892702,366.680360220984,345.802081072608,152.566312147868,74.5646034821127,101.934388788795,127.351583893656,135.086896868475,57.5010257459886,905.187159681488,903.801228946135,929.971542227198,358.105134962038,328.080788729876,390.879445946301,238.935740275185,247.038787320039,165.429996315113,115.545985435574,80.0365316500025,136.784757026773,149.318820747613,134.991221839759,120.439244428399,136.01328008383,296.863360039172,224.514875445602,265.430101225444,230.805995398273,235.887601736323,299.000040883703,255.619871205636,208.662664560475,307.223307988294,345.649624196603,340.392077695836,270.498776134628,231.463738314096,284.939613694548,264.386300054308,339.908616459135,332.794583657892,249.255783310723,284.316246555809,268.601601434258,371.209799719268,347.478033371,837.998236836551,502.48754415713,415.462484895436,356.743809672597,491.230971590438,708.778535387985,210.385741357364,316.148248382297,324.21293374438,289.738451098479,730.695661801418,540.254469914278,784.800138296469,383.976019702799,371.065644293221,384.6002757912,373.582564865925,448.285911777029,797.010805865994,398.270259110925,228.827146004533,251.488485085829,263.824128860931,367.311075026741,544.553302745449,289.912826197561,456.816300373123,410.662173652549,237.075627922566,383.225667525412,377.638996567273,446.085232884404,424.973215577319,447.369057833644,400.043210013699,356.362592015985,995.424054395186,744.479289162819,876.53042635,287.29844637845,298.747893640563,224.921290282027,367.812261526857,450.826351273373,287.786441714991,365.691806954726,506.345317063773,495.01533605756,578.987839571549,525.052430436753,342.477005877836,300.941854703416,292.060774544276,446.387670429388,461.763719740062,480.170223627617,321.959125587228,496.71047181891,212.981177017648,370.647917128926,375.831601214195,329.451185838645,475.738843424998,463.871885807526,501.079502153342,395.680122435164,650.249411452055,609.399844047646,575.715249775471,298.675363996194,322.473332474007,301.784015008661,349.198484988185,330.760673567386,364.378920639987,361.822818031635,292.418007525585,523.108733804919,417.652899080413,535.021765433771,421.233534400266,367.985368349561,339.863578470546,461.9384933732,354.759143227683,270.227512108001,635.395319677844,345.636890629252,360.670431655081,372.739858336004,411.2160690788,476.578168684958,408.286088499182,384.826441625707,393.3845920204,356.079140113311,560.477515624601,579.759159527914,565.200888558329,436.826232605952,600.86377865165,620.922490007117,217.169746591279,403.868492075391,424.908163487513,409.339168969082,415.83413248739,570.484758987851,585.507097233498,546.600377968467,515.583822231075,457.556683822036,371.455141740198,379.906305715546,366.38596689101,412.397114113822,461.506776158844,453.413060334544,420.132655439343,519.003831961262,650.972935501767,493.112298085794,1145.83260602302,712.649914785184,581.014147339312,526.626960519728,459.257378616095,723.665282045051,505.48472829583,280.447289420317,408.553195940159,410.27387231863,458.584745155733,539.035136447763,417.290502473182,561.984905830461,555.190977542005,659.300381084403,585.517910510293,598.428825341875,565.370630628942,716.302138095645,687.608254763082,357.889939952711,456.849009634685,600.162423212793,261.05525932015,293.380851540285,251.640141153197,348.15740861483,314.561694758008,305.713536784268,398.533285805678,342.68125626396,382.322524725388,448.676301300299,339.636178705236,396.006687469828,428.887239071978,484.552545164085,435.188301248552,329.599432388089,406.565850546526,491.940906704101,625.229601581225,250.792397148096,335.881471787838,472.455724788525,328.375704883419,369.537047828601,509.8790224209,500.949479220003,519.416680306539,717.403440514302,611.427929734993,509.489583646043,403.420932818239,344.636933975928,241.512662622403,252.489027267216,370.818428545994,217.253219839322,310.668550896804,265.797900577045,308.827967811843,316.265281799684,572.271192952626,784.034132736738,646.665028917102,573.455290216906,463.045322388166,619.796037437351,541.862875294893,302.428667579141,318.845063568793,320.312419078921,477.061102504377,601.460483215978,506.862196389561,503.998315573969,1379.88489469012,1311.34510827268,1109.88398962333,520.295486818237,314.596145616439,412.738518267503,446.926100320614,462.085134191976,431.921151089939,454.223118624076,525.345364590235,390.016353556204,662.462128494353,630.038063470143,210.821159067887,353.756147940054,196.895603643946,282.148674287213,153.441870291545,307.669104518707,435.747427091684,481.626019537771,429.713593456563,442.098941111591,388.264448435603,479.704881113575,225.633164617953,366.986249949928,415.097029414055,388.1298762071,374.713035117466,434.506550014687,528.728507284986,631.646110875612,537.334193724404,579.85139072197,559.992982730617,540.806761860292,636.394732378643,426.933312347443,228.867517928661,370.428513940525,253.17000147703,502.67932367176,404.8310995482,473.813251979415,490.046114574745,602.889669050507,310.04876159677,304.274981331244,299.051458015365,290.260024978488,348.707002563257,382.984705976578,342.911430117757,366.561459424515,335.325382648311,312.727228298099,290.189423845358,302.460854037982,319.442576365985,348.858138993002,323.223496772349,284.222064063722,391.376487658644,407.537343218533,377.080071270383,414.423427292628,380.97938773503,447.987560791931,489.183235022666,424.550785596688,502.847530706394,416.756979872689,416.140614467976,400.672450903115,505.217314384854,461.174216781067,386.070778185978,449.013789583124,472.103656095695,482.114063969434,518.636795468887,489.918579692807,428.234384495161,466.159528667858,455.894410180558,305.822538053467,370.971701674293,403.572864292684,440.741833493755,447.767471027442,423.622917714586,197.849977726853,358.383224138366,429.097494934452,403.809668997328,304.195566965812,342.005057540122
|phase1_expression=759.425832970933,749.948151016987,740.283762486775,1041.98920795203,1072.91865354508,569.614369597042,568.846779850105,779.259256969913,774.197183112015,668.020158122969,653.881420653204,542.689997645274,887.333383233439,822.625986762765,363.422750140888,586.773324895716,737.338219547067,648.747943059216,602.34370683001,569.106523061159,349.102706070141,518.695929073425,589.527924086577,488.136881942684,407.889701737428,543.797670016924,567.744310937661,522.302268030595,438.003981846942,414.337533325326,424.613927904909,210.830183588598,182.674241912617,206.02618532007,546.507264569412,386.495550458495,525.327753663076,857.152779749187,814.932764338324,971.66006881537,1097.05172517784,1047.79177392626,923.440691465254,398.463428892702,366.680360220984,345.802081072608,152.566312147868,74.5646034821127,101.934388788795,127.351583893656,135.086896868475,57.5010257459886,905.187159681488,903.801228946135,929.971542227198,358.105134962038,328.080788729876,390.879445946301,238.935740275185,247.038787320039,165.429996315113,115.545985435574,80.0365316500025,136.784757026773,149.318820747613,134.991221839759,120.439244428399,136.01328008383,296.863360039172,224.514875445602,265.430101225444,230.805995398273,235.887601736323,299.000040883703,255.619871205636,208.662664560475,307.223307988294,345.649624196603,340.392077695836,270.498776134628,231.463738314096,284.939613694548,264.386300054308,339.908616459135,332.794583657892,249.255783310723,284.316246555809,268.601601434258,371.209799719268,347.478033371,837.998236836551,502.48754415713,415.462484895436,356.743809672597,491.230971590438,708.778535387985,210.385741357364,316.148248382297,324.21293374438,289.738451098479,730.695661801418,540.254469914278,784.800138296469,383.976019702799,371.065644293221,384.6002757912,373.582564865925,448.285911777029,797.010805865994,398.270259110925,228.827146004533,251.488485085829,263.824128860931,367.311075026741,544.553302745449,289.912826197561,456.816300373123,410.662173652549,237.075627922566,383.225667525412,377.638996567273,446.085232884404,424.973215577319,447.369057833644,400.043210013699,356.362592015985,995.424054395186,744.479289162819,876.53042635,287.29844637845,298.747893640563,224.921290282027,367.812261526857,450.826351273373,287.786441714991,365.691806954726,506.345317063773,495.01533605756,578.987839571549,525.052430436753,342.477005877836,300.941854703416,292.060774544276,446.387670429388,461.763719740062,480.170223627617,321.959125587228,496.71047181891,212.981177017648,370.647917128926,375.831601214195,329.451185838645,475.738843424998,463.871885807526,501.079502153342,395.680122435164,650.249411452055,609.399844047646,575.715249775471,298.675363996194,322.473332474007,301.784015008661,349.198484988185,330.760673567386,364.378920639987,361.822818031635,292.418007525585,523.108733804919,417.652899080413,535.021765433771,421.233534400266,367.985368349561,339.863578470546,461.9384933732,354.759143227683,270.227512108001,635.395319677844,345.636890629252,360.670431655081,372.739858336004,411.2160690788,476.578168684958,408.286088499182,384.826441625707,393.3845920204,356.079140113311,560.477515624601,579.759159527914,565.200888558329,436.826232605952,600.86377865165,620.922490007117,217.169746591279,403.868492075391,424.908163487513,409.339168969082,415.83413248739,570.484758987851,585.507097233498,546.600377968467,515.583822231075,457.556683822036,371.455141740198,379.906305715546,366.38596689101,412.397114113822,461.506776158844,453.413060334544,420.132655439343,519.003831961262,650.972935501767,493.112298085794,1145.83260602302,712.649914785184,581.014147339312,526.626960519728,459.257378616095,723.665282045051,505.48472829583,280.447289420317,408.553195940159,410.27387231863,458.584745155733,539.035136447763,417.290502473182,561.984905830461,555.190977542005,659.300381084403,585.517910510293,598.428825341875,565.370630628942,716.302138095645,687.608254763082,357.889939952711,456.849009634685,600.162423212793,261.05525932015,293.380851540285,251.640141153197,348.15740861483,314.561694758008,305.713536784268,398.533285805678,342.68125626396,382.322524725388,448.676301300299,339.636178705236,396.006687469828,428.887239071978,484.552545164085,435.188301248552,329.599432388089,406.565850546526,491.940906704101,625.229601581225,250.792397148096,335.881471787838,472.455724788525,328.375704883419,369.537047828601,509.8790224209,500.949479220003,519.416680306539,717.403440514302,611.427929734993,509.489583646043,403.420932818239,344.636933975928,241.512662622403,252.489027267216,370.818428545994,217.253219839322,310.668550896804,265.797900577045,308.827967811843,316.265281799684,572.271192952626,784.034132736738,646.665028917102,573.455290216906,463.045322388166,619.796037437351,541.862875294893,302.428667579141,318.845063568793,320.312419078921,477.061102504377,601.460483215978,506.862196389561,503.998315573969,1379.88489469012,1311.34510827268,1109.88398962333,520.295486818237,314.596145616439,412.738518267503,446.926100320614,462.085134191976,431.921151089939,454.223118624076,525.345364590235,390.016353556204,662.462128494353,630.038063470143,210.821159067887,353.756147940054,196.895603643946,282.148674287213,153.441870291545,307.669104518707,435.747427091684,481.626019537771,429.713593456563,442.098941111591,388.264448435603,479.704881113575,225.633164617953,366.986249949928,415.097029414055,388.1298762071,374.713035117466,434.506550014687,528.728507284986,631.646110875612,537.334193724404,579.85139072197,559.992982730617,540.806761860292,636.394732378643,426.933312347443,228.867517928661,370.428513940525,253.17000147703,502.67932367176,404.8310995482,473.813251979415,490.046114574745,602.889669050507,310.04876159677,304.274981331244,299.051458015365,290.260024978488,348.707002563257,382.984705976578,342.911430117757,366.561459424515,335.325382648311,312.727228298099,290.189423845358,302.460854037982,319.442576365985,348.858138993002,323.223496772349,284.222064063722,391.376487658644,407.537343218533,377.080071270383,414.423427292628,380.97938773503,447.987560791931,489.183235022666,424.550785596688,502.847530706394,416.756979872689,416.140614467976,400.672450903115,505.217314384854,461.174216781067,386.070778185978,449.013789583124,472.103656095695,482.114063969434,518.636795468887,489.918579692807,428.234384495161,466.159528667858,455.894410180558,305.822538053467,370.971701674293,403.572864292684,440.741833493755,447.767471027442,423.622917714586,197.849977726853,358.383224138366,429.097494934452,403.809668997328,304.195566965812,342.005057540122
|short_description=p1@Gm12966,p1@Srsf5
}}
}}

Latest revision as of 21:12, 26 September 2015

Short description:p1@Gm12966, p1@Srsf5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm12966_5end, CAGE_peak_1_at_Srsf5_5end
Coexpression cluster:MCL_coexpression_mm9:298
Association with transcript: 0bp_to_ENSMUST00000021562, ENSMUST00000110351, ENSMUST00000110352, ENSMUST00000152662, ENSMUST00000153056_5end
EntrezGene:20384,622469
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm12966p1@Srsf5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7759.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5749.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6740.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I31041.99
CD326+ enterocyte, pool2.CNhs13197.11849-124I41072.92
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7569.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8568.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9779.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7774.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2668.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6653.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1542.69
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4887.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8822.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1363.42
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3586.77
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5737.34
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2648.75
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4602.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6569.11
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3349.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2518.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9589.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1488.14
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2407.89
GP2+ M cell, pool1.CNhs13228.11845-124H9543.80
GP2+ M cell, pool2.CNhs13231.11846-124I1567.74
GP2+ M cell, pool3.CNhs13240.11847-124I2522.30
Ileum epithelium, pool1.CNhs13199.10252-104B9438.00
Ileum epithelium, pool2.CNhs13232.10253-104C1414.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8424.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3210.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6182.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9206.03
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5546.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6386.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7525.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8857.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1814.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3971.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91097.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21047.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4923.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8398.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9366.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3345.80
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7152.57
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C274.56
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8101.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3127.35
Mouse Astrocytes, donor2.CNhs12078.11552-120C4135.09
Mouse Astrocytes, donor3.CNhs12107.11633-122C457.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2905.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9903.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1929.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1358.11
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1328.08
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5390.88
Mouse Granule cells, donor1.CNhs12131.11713-123C3238.94
Mouse Granule cells, donor2.CNhs12357.11731-123E3247.04
Mouse Granule cells, donor3.CNhs12108.11636-122C7165.43
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6115.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D180.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7136.78
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7149.32
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2134.99
Mouse Microglia, donor1.CNhs12629.11718-123C8120.44
Mouse Microglia, donor2.CNhs12634.11736-123E8136.01
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5296.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5224.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9265.43
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1230.81
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5235.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2299.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2255.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6208.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3307.22
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3345.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7340.39
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4270.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4231.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8284.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4264.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5339.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6332.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6249.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6284.32
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1268.60
Mouse Schwann, donor1.CNhs12507.11728-123D9371.21
Mouse Schwann, donor2.CNhs12573.11746-123F9347.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3838.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7502.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C4415.46
Mouse hepatocyte, donor3.CNhs12615.11637-122C8356.74
Mouse hepatocyte, donor6.CNhs13090.11822-124F4491.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F6708.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7210.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7316.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3324.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8289.74
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6730.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1540.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8784.80
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6383.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1371.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2384.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3373.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6448.29
accessory axillary lymph node, adult.CNhs10475.1063-29H9797.01
adrenal gland, adult.CNhs10508.49-24D7398.27
adrenal gland, embryo E14.CNhs11038.406-44C5228.83
adrenal gland, embryo E16.CNhs11004.1254-43D6251.49
adrenal gland, embryo E17.CNhs11043.1263-45I1263.82
adrenal gland, embryo E18.CNhs11026.1262-18F5367.31
adrenal gland, neonate N00.CNhs11191.1311-23C1544.55
adrenal gland, neonate N25.CNhs11223.1377-27I3289.91
amnion, adult pregnant day17.5.CNhs10488.583-22A8456.82
aorta, adult.CNhs10498.46-23H1410.66
bone (os femoris), adult.CNhs10483.56-12G2237.08
bone (os femoris), neonate N02.CNhs11227.1985-43F5383.23
bone (os femoris), neonate N16.CNhs11225.1525-43A6377.64
bone (os femoris), neonate N20.CNhs11195.1350-25C3446.09
cecum, adult.CNhs10467.37-13H4424.97
cerebellum, adult.CNhs10494.15-8B2447.37
cerebellum, neonate N30.CNhs11135.1395-42I2400.04
colon, adult.CNhs10468.36-18H7356.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7995.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1744.48
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4876.53
corpora quadrigemina, adult.CNhs10501.16-22A4287.30
corpus striatum, adult.CNhs10487.19-21D8298.75
corpus striatum, neonate N00.CNhs11226.630-43F1224.92
cortex, adult.CNhs10473.12-14D5367.81
cortex, neonate N30.CNhs11107.1392-42F2450.83
diencephalon, adult.CNhs10482.20-12F2287.79
diencephalon, neonate N30.CNhs11201.1388-42B2365.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1506.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2495.02
epididymis, adult.CNhs10490.58-23B2578.99
eyeball, adult.CNhs10484.31-12G4525.05
eyeball, embryo E12.CNhs11016.345-16C6342.48
eyeball, embryo E14.CNhs10521.399-16E2300.94
eyeball, embryo E15.CNhs10593.426-16C9292.06
eyeball, embryo E17.CNhs11023.1261-18D4446.39
eyeball, neonate N00.CNhs11207.633-15C6461.76
eyeball, neonate N01.CNhs11140.1532-43E7480.17
eyeball, neonate N02.CNhs11205.1551-44G8321.96
eyeball, neonate N16.CNhs11188.777-19A2496.71
forelimb, embryo E11.CNhs10596.335-25E2212.98
forelimb, embryo E12.CNhs10600.359-14H2370.65
forelimb, embryo E13.CNhs10589.384-1E2375.83
forelimb, embryo E14.CNhs10577.413-26A8329.45
forelimb, embryo E15.CNhs11007.437-20E7475.74
forelimb, embryo E17.CNhs10598.1517-43C4463.87
forelimb, embryo E18.CNhs11008.1520-43B5501.08
gonad, embryo E13.CNhs11044.1564-45I6395.68
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8650.25
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2609.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5575.72
heart, embryo E11.CNhs10586.331-24E9298.68
heart, embryo E12.CNhs11015.353-12F5322.47
heart, embryo E13.CNhs11013.376-3I9301.78
heart, embryo E14.CNhs10597.403-26D4349.20
heart, embryo E15.CNhs11017.431-16C8330.76
heart, embryo E16.CNhs11021.457-17C6364.38
heart, embryo E17.CNhs11025.479-18E5361.82
heart, embryo E18.CNhs11030.1283-20G3292.42
heart, neonate N00.CNhs11213.639-21E3523.11
heart, neonate N03.CNhs11221.1349-25I2417.65
heart, neonate N10.CNhs11118.749-24G1535.02
heart, neonate N16.CNhs11209.782-15G1421.23
heart, neonate N20.CNhs11127.821-26I6367.99
heart, neonate N25.CNhs11196.1351-25D3339.86
heart, neonate N30.CNhs11202.1390-42D2461.94
hippocampus, adult.CNhs10478.13-16E8354.76
hippocampus, neonate N00.CNhs11228.627-43G1270.23
intestinal mucosa, adult.CNhs10506.860-29I3635.40
intestine, adult.CNhs10496.178-9A3345.64
intestine, embryo E12.CNhs11019.1251-16I5360.67
intestine, embryo E13.CNhs11010.381-16D5372.74
intestine, embryo E15.CNhs10602.976-16D8411.22
intestine, embryo E16.CNhs10585.463-22H4476.58
intestine, embryo E17.CNhs10582.482-18D3408.29
intestine, embryo E18.CNhs10526.1289-20F7384.83
intestine, neonate N00.CNhs11126.644-26D1393.38
intestine, neonate N01.CNhs11192.1322-23E9356.08
intestine, neonate N06.CNhs11102.688-20B8560.48
intestine, neonate N07.CNhs11095.720-20F2579.76
intestine, neonate N10.CNhs11098.755-23A5565.20
intestine, neonate N20.CNhs11187.827-18D1436.83
intestine, neonate N25.CNhs11121.1352-25E3600.86
intestine, neonate N30.CNhs11131.1384-42G1620.92
kidney, embryo E14.CNhs10606.411-4I9217.17
kidney, embryo E15.CNhs10997.434-16F8403.87
kidney, embryo E16.CNhs10584.464-22A5424.91
kidney, embryo E17.CNhs11028.483-18I2409.34
kidney, embryo E18.CNhs11001.1288-20C7415.83
kidney, neonate N00.CNhs11214.646-21G7570.48
kidney, neonate N10.CNhs11206.758-6D5585.51
kidney, neonate N20.CNhs11113.832-19I1546.60
kidney, neonate N25.CNhs11122.1353-25F3515.58
kidney, neonate N30.CNhs11203.1385-42H1457.56
liver, adult pregnant day01.CNhs10466.508-5B2371.46
liver, embryo E12.CNhs10601.355-15F8379.91
liver, embryo E13.CNhs10524.378-3H6366.39
liver, embryo E14.CNhs10594.409-16E1412.40
liver, embryo E15.CNhs10520.433-16D7461.51
liver, embryo E16.CNhs10523.462-17F5453.41
liver, embryo E17.CNhs10510.481-18A3420.13
liver, embryo E18.CNhs10579.499-43G4519.00
liver, neonate N00.CNhs11117.641-24F4650.97
liver, neonate N03.CNhs11123.1345-25G2493.11
liver, neonate N06.CNhs11101.684-20A81145.83
liver, neonate N07.CNhs11103.716-20H2712.65
liver, neonate N10.CNhs11115.751-24B9581.01
liver, neonate N20.CNhs11220.823-25A3526.63
liver, neonate N25.CNhs11198.1368-26H1459.26
liver, neonate N30.CNhs11106.1382-42D1723.67
lung, adult.CNhs10474.28-22B1505.48
lung, embryo E12.CNhs10522.354-16G2280.45
lung, embryo E14.CNhs10604.404-26F8408.55
lung, embryo E15.CNhs11020.432-17C5410.27
lung, embryo E16.CNhs10998.458-17B6458.58
lung, embryo E17.CNhs10605.480-44A6539.04
lung, embryo E18.CNhs10583.1287-20I6417.29
lung, neonate N00.CNhs11224.640-42C6561.98
lung, neonate N06.CNhs11212.683-20E5555.19
lung, neonate N07.CNhs11111.715-19A3659.30
lung, neonate N10.CNhs11219.750-23E6585.52
lung, neonate N20.CNhs11109.822-18A4598.43
lung, neonate N25.CNhs11119.1359-25C7565.37
lung, neonate N30.CNhs11133.1394-42H2716.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1687.61
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1357.89
mammary gland, adult lactating day02.CNhs10480.595-22B6456.85
mammary gland, adult pregnant day19.CNhs10476.588-5H2600.16
medulla oblongata, adult.CNhs10477.17-12C2261.06
medulla oblongata, neonate N30.CNhs11200.1396-42A3293.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7251.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2348.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1314.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2305.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3398.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7342.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8382.32
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9448.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4339.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5396.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6428.89
olfactory brain, adult.CNhs10489.18-22I9484.55
ovary, adult.CNhs10507.91-2I7435.19
ovary, embryo E18.CNhs11040.505-44H7329.60
ovary, neonate N00.CNhs11217.1299-22I4406.57
oviduct, adult pregnant day01.CNhs10500.988-6G6491.94
pancreas, adult.CNhs10486.34-16E4625.23
pancreas, embryo E14.CNhs11012.405-44F4250.79
pancreas, embryo E15.CNhs11042.1556-45F2335.88
pancreas, embryo E16.CNhs11003.460-26E5472.46
pancreas, embryo E17.CNhs10599.1558-45G3328.38
pancreas, embryo E18.CNhs10580.1535-43I7369.54
pancreas, neonate N00.CNhs11105.645-26G9509.88
pancreas, neonate N01.CNhs11138.1531-43D7500.95
pancreas, neonate N02.CNhs11139.1539-43D8519.42
pancreas, neonate N16.CNhs11136.787-43B6717.40
pancreas, neonate N25.CNhs11094.1555-45E2611.43
pancreas, neonate N30.CNhs11182.1548-44H5509.49
pituitary gland, adult.CNhs10493.21-1G8403.42
pituitary gland, embryo E12.CNhs11018.346-16E6344.64
pituitary gland, embryo E13.CNhs11009.370-44C7241.51
pituitary gland, embryo E14.CNhs11037.398-44A5252.49
pituitary gland, embryo E15.CNhs10592.427-16B9370.82
pituitary gland, embryo E16.CNhs11036.449-43F6217.25
pituitary gland, embryo E17.CNhs11039.1265-44F5310.67
pituitary gland, neonate N00.CNhs11190.1308-22E9265.80
placenta, adult pregnant day10.CNhs10472.539-13I7308.83
placenta, adult pregnant day17.CNhs10464.577-18G3316.27
prostate, adult.CNhs10470.859-1F8572.27
skin, adult.CNhs10492.30-1C3784.03
skin, neonate N00.CNhs11124.650-25G4646.67
skin, neonate N03.CNhs11215.662-22H3573.46
skin, neonate N06.CNhs11097.693-20I5463.05
skin, neonate N10.CNhs11108.762-6C4619.80
small intestine, neonate N16.CNhs11114.790-21I1541.86
spinal cord, adult.CNhs10505.24-13C9302.43
spleen, adult.CNhs10465.25-2G2318.85
spleen, embryo E16.CNhs11035.461-43C1320.31
spleen, embryo E18.CNhs11011.1271-21F2477.06
spleen, neonate N10.CNhs11116.752-24D1601.46
spleen, neonate N20.CNhs11112.824-19H1506.86
spleen, neonate N25.CNhs11099.1354-25G3504.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61379.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91311.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31109.88
stomach, adult.CNhs10503.33-1H6520.30
stomach, embryo E12.CNhs10588.356-43E3314.60
stomach, embryo E15.CNhs10603.1252-16G8412.74
stomach, embryo E16.CNhs11022.459-17D4446.93
stomach, embryo E17.CNhs11006.1035-18D5462.09
stomach, embryo E18.CNhs10999.1286-20C6431.92
stomach, neonate N03.CNhs11193.1340-24B8454.22
stomach, neonate N07.CNhs11210.718-18A9525.35
stomach, neonate N25.CNhs11104.1355-25E4390.02
stomach, neonate N30.CNhs11134.1386-42I1662.46
submandibular gland, adult.CNhs10469.59-29C1630.04
testis, adult.CNhs10504.57-7G5210.82
testis, embryo E13.CNhs11031.389-23F5353.76
testis, embryo E15.CNhs11034.443-27C5196.90
testis, embryo E16.CNhs11033.470-26G5282.15
testis, embryo E17.CNhs11029.486-18I5153.44
testis, embryo E18.CNhs11027.503-18G5307.67
testis, neonate N00.CNhs11189.1300-22B7435.75
testis, neonate N07.CNhs11222.726-26I4481.63
testis, neonate N10.CNhs11204.763-44D9429.71
testis, neonate N20.CNhs11110.839-18H3442.10
testis, neonate N30.CNhs11130.1391-42E2388.26
thymus, adult.CNhs10471.38-12B5479.70
thymus, embryo E14.CNhs11041.402-44I4225.63
thymus, embryo E15.CNhs11005.430-45I2366.99
thymus, embryo E16.CNhs11002.456-26C5415.10
thymus, embryo E17.CNhs10581.478-18C1388.13
thymus, embryo E18.CNhs10595.1273-19G4374.71
thymus, neonate N02.CNhs11181.1541-43F8434.51
thymus, neonate N03.CNhs11137.2104-43C7528.73
thymus, neonate N06.CNhs11197.681-26C4631.65
thymus, neonate N07.CNhs11211.713-19D3537.33
thymus, neonate N10.CNhs11194.748-24E4579.85
thymus, neonate N20.CNhs11186.820-7A2559.99
thymus, neonate N25.CNhs11125.1362-25G7540.81
thymus, neonate N30.CNhs11132.1393-42G2636.39
tongue, adult.CNhs10499.32-1B4426.93
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3228.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7370.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5253.17
urinary bladder, adult.CNhs10481.879-12E4502.68
uterus, adult pregnant day19.CNhs10497.590-15F5404.83
uterus, adult.CNhs10509.92-27E5473.81
vagina, adult.CNhs10502.89-27D5490.05
vesicular gland, adult.CNhs10491.51-27F8602.89
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1310.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2304.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3299.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7290.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4348.71
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5382.98
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6342.91
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7366.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8335.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9312.73
whole body, embryo E11.CNhs11014.324-5I8290.19
whole body, embryo E12.CNhs10587.857-27C9302.46
whole body, embryo E13.CNhs10512.372-23H2319.44
whole body, embryo E14.5.CNhs10578.420-27D2348.86
whole body, embryo E14.CNhs10519.395-14B1323.22
whole body, embryo E16.CNhs10514.453-14F2284.22
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5391.38
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5407.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5377.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5414.42
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5380.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5447.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5489.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5424.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5502.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5416.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5416.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5400.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5505.22
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5461.17
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5386.07
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5449.01
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5472.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5482.11
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5518.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5489.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5428.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5466.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5455.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5305.82
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5370.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5403.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5440.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5447.77
whole body, embryo E17.5.CNhs10513.490-9F9423.62
whole body, embryo E17.CNhs10517.475-3I5197.85
whole body, embryo E18.CNhs10516.493-3B3358.38
whole body, neonate N00.CNhs10525.657-19C2429.10
whole body, neonate N01.CNhs10576.659-23C6403.81
whole body, neonate N06.CNhs10515.692-21D1304.20
whole body, neonate N10.CNhs10518.761-6B4342.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell4.27e-0712

Uber anatomy
Ontology termp-valuen
digestive system1.54e-12116
digestive tract1.54e-12116
primitive gut1.54e-12116
subdivision of digestive tract1.84e-12114
endoderm-derived structure8.62e-12118
endoderm8.62e-12118
presumptive endoderm8.62e-12118
endo-epithelium1.59e-1169
unilaminar epithelium3.53e-1066
gut epithelium1.33e-0955
foregut1.75e-0880
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:82046510..82046528,%2B&oldid=4274546"