FFCP PHASE1:Mm9::chr1:178927958..178928000,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:178927958..178928000,+ to FFCP PHASE1:Mm9::chr1:178927958..178928000,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76816 | |EntrezGene=76816 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=604 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-139bp_to_ENSMUST00000139589_5end | |||
|cluster_id=chr1:178927958..178928000,+ | |||
|description=CAGE_peak_2_at_Sdccag8_5end | |||
|id=chr1:178927958..178928000,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.29e-08!9;CL:0002251!1.29e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.48e-14,9;CL:0002251,1.48e-14,9;CL:0000239,1.28e-09,6;CL:0000677,1.28e-09,6;CL:0000584,1.28e-09,6;CL:0000075,4.02e-08,7;CL:0002076,6.36e-08,15;CL:0000066,2.36e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.67e-18!43;UBERON:0005409!9.60e-14!59;UBERON:0000344!2.29e-13!15;UBERON:0001242!6.16e-12!13;UBERON:0000060!6.16e-12!13;UBERON:0001262!6.16e-12!13;UBERON:0004786!6.16e-12!13;UBERON:0003350!1.29e-08!9;UBERON:0004808!1.29e-08!9;UBERON:0001277!1.29e-08!9;UBERON:0000485!1.28e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.06e-40,31;UBERON:0005409,1.39e-27,47;UBERON:0000344,2.58e-23,15;UBERON:0001242,1.13e-20,13;UBERON:0001262,1.13e-20,13;UBERON:0004786,1.13e-20,13;UBERON:0003350,1.48e-14,9;UBERON:0004808,1.48e-14,9;UBERON:0001277,1.48e-14,9;UBERON:0004923,5.24e-13,24;UBERON:0000485,1.56e-11,11;UBERON:0002108,3.85e-08,4;UBERON:0001007,1.16e-07,116;UBERON:0001555,1.16e-07,116;UBERON:0007026,1.16e-07,116;UBERON:0004119,2.14e-07,118;UBERON:0000925,2.14e-07,118;UBERON:0006595,2.14e-07,118 | |||
|phase1_expression=0,3.14077866875425,3.63999391511629,7.56160528267075,13.5241847085514,4.53274034162102,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,3.35984087866154,5.96464130774642,4.59385571292016,5.1691439539089,4.30942465371778,14.0617330397717,18.3981994724749,7.53883736228036,0,0,0,14.1537293678125,14.9611180822643,13.4751775133164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0.810035629990144,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.520481771850815,0.459804208866946,1.26043490863744,1.05493372485001,1.2246569847239,1.92170580427275,2.24884138943349,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,3.63460661282178,14.0158800331678,0,0,1.41754207454303,6.25218926332362,8.89512175379481,8.17970192284004,13.7613427847908,22.3990578424655,25.3848560888272,23.2779072288146,20.6661932346267,12.5834717211591,11.4553166433588,8.16479220342906,0.189667900953082,0.685491075658373,3.38123207019241,2.8511185898344,1.93952487167626,2.87556861550306,6.5133633237985,6.6424566590821,8.79192875911699,5.92306386824642,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,3.35956781118687,0.363533729477506,0.712994756769443,0,0,0,1.02131881726136,0,0.129358683782755,1.07168517515796,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0.164140899745061,22.1525435838687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,1.31017538247707,0,0.0826534557253359,0,4.01806417204558,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.735374033800057,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.576226371643824,0.516919220600519,0,1.0429589335037,0.964546102318525,0,0,0.342869252385415,1.24233064311536,0.476872379894642,1.16277133305863,0.752875043322645,0.25384382367503,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,0.830445126869219,0.29551344712669,0.818462086339379,0.464810523557898,0.192906610981141,0,0.467863216890817,1.07435527024149,0,0,0 | |phase1_expression=0,3.14077866875425,3.63999391511629,7.56160528267075,13.5241847085514,4.53274034162102,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,3.35984087866154,5.96464130774642,4.59385571292016,5.1691439539089,4.30942465371778,14.0617330397717,18.3981994724749,7.53883736228036,0,0,0,14.1537293678125,14.9611180822643,13.4751775133164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0.810035629990144,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.520481771850815,0.459804208866946,1.26043490863744,1.05493372485001,1.2246569847239,1.92170580427275,2.24884138943349,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,3.63460661282178,14.0158800331678,0,0,1.41754207454303,6.25218926332362,8.89512175379481,8.17970192284004,13.7613427847908,22.3990578424655,25.3848560888272,23.2779072288146,20.6661932346267,12.5834717211591,11.4553166433588,8.16479220342906,0.189667900953082,0.685491075658373,3.38123207019241,2.8511185898344,1.93952487167626,2.87556861550306,6.5133633237985,6.6424566590821,8.79192875911699,5.92306386824642,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,3.35956781118687,0.363533729477506,0.712994756769443,0,0,0,1.02131881726136,0,0.129358683782755,1.07168517515796,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0.164140899745061,22.1525435838687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,1.31017538247707,0,0.0826534557253359,0,4.01806417204558,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.735374033800057,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.576226371643824,0.516919220600519,0,1.0429589335037,0.964546102318525,0,0,0.342869252385415,1.24233064311536,0.476872379894642,1.16277133305863,0.752875043322645,0.25384382367503,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,0.830445126869219,0.29551344712669,0.818462086339379,0.464810523557898,0.192906610981141,0,0.467863216890817,1.07435527024149,0,0,0 | ||
|short_description=p2@Sdccag8 | |||
}} | }} |
Latest revision as of 21:17, 26 September 2015
Short description: | p2@Sdccag8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sdccag8_5end |
Coexpression cluster: | MCL_coexpression_mm9:604 |
Association with transcript: | -139bp_to_ENSMUST00000139589_5end |
EntrezGene: | Sdccag8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.48e-14 | 9 |
epithelial cell of alimentary canal | 1.48e-14 | 9 |
brush border epithelial cell | 1.28e-09 | 6 |
gut absorptive cell | 1.28e-09 | 6 |
enterocyte | 1.28e-09 | 6 |
columnar/cuboidal epithelial cell | 4.02e-08 | 7 |
endo-epithelial cell | 6.36e-08 | 15 |
epithelial cell | 2.36e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.06e-40 | 31 |
gastrointestinal system | 1.39e-27 | 47 |
mucosa | 2.58e-23 | 15 |
intestinal mucosa | 1.13e-20 | 13 |
wall of intestine | 1.13e-20 | 13 |
gastrointestinal system mucosa | 1.13e-20 | 13 |
epithelium of mucosa | 1.48e-14 | 9 |
gastrointestinal system epithelium | 1.48e-14 | 9 |
intestinal epithelium | 1.48e-14 | 9 |
organ component layer | 5.24e-13 | 24 |
simple columnar epithelium | 1.56e-11 | 11 |
small intestine | 3.85e-08 | 4 |
digestive system | 1.16e-07 | 116 |
digestive tract | 1.16e-07 | 116 |
primitive gut | 1.16e-07 | 116 |
endoderm-derived structure | 2.14e-07 | 118 |
endoderm | 2.14e-07 | 118 |
presumptive endoderm | 2.14e-07 | 118 |