FFCP PHASE1:Mm9::chr9:56842884..56842924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56294 | |EntrezGene=56294 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1016 | |||
|TSSclassifier=NA | |||
|UniProt=O35239,Q2M4G8 | |UniProt=O35239,Q2M4G8 | ||
|association_with_transcript=109bp_to_ENSMUST00000034832,NM_019651,uc009ptt.1_5end | |association_with_transcript=109bp_to_ENSMUST00000034832,NM_019651,uc009ptt.1_5end | ||
|cluster_id=chr9:56842884..56842924,+ | |||
|description=CAGE_peak_2_at_Ptpn9_5end | |description=CAGE_peak_2_at_Ptpn9_5end | ||
|id=chr9:56842884..56842924,+ | |id=chr9:56842884..56842924,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.75e-18!50;CL:0000221!3.10e-15!44;CL:0000133!3.10e-15!44;CL:0002319!8.99e-15!43;CL:0000393!5.10e-13!39;CL:0000211!5.10e-13!39;CL:0000540!4.83e-10!33;CL:0000047!4.83e-10!33;CL:0000031!4.83e-10!33;CL:0000404!4.83e-10!33;CL:0002321!6.61e-10!70;CL:0000220!6.61e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.05e-15,44;CL:0000133,3.05e-15,44;CL:0002319,8.86e-15,43;CL:0000393,5.03e-13,39;CL:0000211,5.03e-13,39;CL:0000540,4.78e-10,33;CL:0000047,4.78e-10,33;CL:0000031,4.78e-10,33;CL:0000404,4.78e-10,33;CL:0002321,5.91e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.57e-10!75;UBERON:0001016!1.57e-10!75;UBERON:0001017!3.08e-10!73;UBERON:0005743!3.08e-10!73;UBERON:0004121!4.00e-09!102;UBERON:0000924!4.00e-09!102;UBERON:0006601!4.00e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.55e-10,75;UBERON:0001017,3.05e-10,73;UBERON:0004121,6.72e-09,95;UBERON:0000924,6.72e-09,95;UBERON:0006601,6.72e-09,95;UBERON:0010314,9.94e-07,92 | |||
|phase1_expression=12.0111635328595,1.39590163055744,4.09499315450582,0.30246421130683,0.500895729946347,2.51818907867835,1.86890112476421,1.42035655785734,0.563154888606667,0.70219357896598,0.171217968225505,0.319088635981346,0.513602189793617,1.22388563386596,1.66554880907831,0.809901069559304,0,1.26184866143295,1.50825876966313,2.54633791078818,3.23164502574065,3.07801948722744,6.00759515019551,1.75991665072747,1.14704640533585,2.8711598205751,2.58457197695445,2.37018355954478,1.52018735565099,0.252030129759931,0.665191531965914,0,0.61506478758457,0,1.1554064790051,1.66234645358492,0.408338712524738,3.34825304589526,1.5626706890476,2.09409497589519,5.88231488031014,4.09827290975067,5.34061388334269,7.1761186246079,6.89363132292699,10.2786181210542,18.7773922643529,8.28495594245697,10.5449367712546,11.2769341463084,15.2585199571645,10.062679505548,0.838913030288682,3.62681071005672,1.68046899571232,14.1492689819771,8.88253663810146,10.8291139378263,8.49729135610311,10.0508286061686,8.87363964908651,10.8430250262122,8.00365316500025,4.49949858640699,7.9109309005358,4.2628806896766,10.4860038681442,8.4528027170742,7.46565208621039,7.42532660824299,6.30974884054146,6.85562362569129,9.05561017901615,4.16468717330844,5.07980996396653,9.19218786610021,4.40463523997555,3.06449611404451,2.91852413186863,10.6827893061457,8.59983849862651,9.89735404057844,3.90856198601933,3.93933827022176,4.73674568108111,7.07108605136802,7.11858403995515,7.08317894136142,4.99792875999015,5.7434385681157,7.53647670624362,8.60423876981386,2.03991400112325,1.61910957491345,3.24888208723835,1.34408066129201,0.983110940922263,9.03280709663706,5.19572009205738,8.83348936275851,8.45060518660083,10.2661181931454,33.1246811618639,56.8853362522665,1.94841936910093,0.506719730950197,0.505524445014783,2.51204535381932,1.55362730188303,4.89859058913922,4.68410382268567,3.34912026143355,3.68984795609694,4.6724018571313,5.52666923537813,3.89566433121994,2.96633961281249,2.74738778147832,1.76922110389975,4.52947179852746,1.54589062922275,2.90925151881133,0,2.04946557908083,2.30391377494801,1.53274233125155,2.51611761462433,2.99951365496704,3.30382590389968,3.89455662452539,4.11750542536764,6.28271760564322,2.25971616249959,2.04572365864264,4.36354893575076,4.05603157669394,12.0170449343373,3.11017426525233,1.26361379216837,0.841767423545896,4.81445638962004,6.43725892413724,6.48223667299257,6.32960234910003,5.10273743634959,5.50888997224854,6.65282244374075,1.81092359517311,3.66465587985832,3.78212160335639,7.38994721488585,7.89104636739269,8.61946472599353,6.61679116392116,5.55611768301447,5.57295947091781,0.702213187313235,1.28673953557358,3.6941254921427,3.72826390563903,4.69052119962192,4.8616756594474,4.02466050494857,5.70616272067471,5.09081472528348,3.48800917125612,3.75582761959467,4.90414437942112,3.12663714835613,3.77585167381919,3.08061476274252,2.92399974850665,1.75640092232841,1.8788898626452,2.52347938276953,8.74689205223918,0.991256348951394,0.528901133327089,3.41261200856374,3.48355007790658,3.22168653305233,4.63872106633688,3.11329261382818,3.23383564391351,1.42358718463353,2.79988223030818,2.5133520880027,1.98956472041151,3.50935356814416,1.79763881730844,1.51296634912286,2.38969527905241,2.84501851429623,5.9409226557059,9.01661885384643,4.2766778847516,3.87904974335251,5.40045813155453,5.75452487830741,2.06654207171443,2.35498091762062,2.22114895059241,2.66807364378434,1.33476084572875,1.37591296579242,1.12431056192427,0.608580364165509,1.4470629585145,1.52775511068852,2.01387296215567,1.62135226775035,1.92192989231657,5.75072826109418,1.86070473834252,5.30464044294753,3.03094653536534,1.07638448113147,3.85954817090694,3.51031061316549,5.11626811780309,6.19266910479698,6.62005834523234,6.57132695207806,5.19269398069629,4.76087281772027,9.95181604074774,10.0886492227962,8.858587585951,11.0023790373666,4.09658286789345,3.10832967358612,3.7608755231193,1.50791283939272,3.26343410291226,1.47529281905711,2.20749397043786,1.60550589987792,3.7507739709505,5.40985319743029,0.504941854408746,9.4652465824877,6.63745865304285,7.97066571611356,8.84184552424442,9.80314165962534,7.35998980050964,6.47697122679831,9.9366991689846,5.92931666919785,3.85585579706168,2.98074178937364,10.5058706163681,10.750539317336,4.12425307431339,3.98235415019888,3.8844901784797,1.81394134178851,2.82907619633847,2.36241514304618,3.3817866273832,7.23599220871019,3.27180356529755,3.92147116223193,1.26414703174326,1.05418608574999,0,2.7235168460303,4.14140516272013,5.56242340265844,7.50179622610573,5.32020700926821,7.66985915688903,7.89835298890181,7.30715877875038,3.52007562095566,2.75381692122966,1.98475558249466,3.46261131177108,3.71368181400583,3.43783672090488,2.74556391207214,3.28281799490123,3.78925087618806,1.48340241608408,2.22132145037209,6.60437977482312,3.1483069652851,1.50694765603753,1.50363650493128,1.60144721244566,2.71965487990169,3.63873776041511,3.59319931891502,0.954670618015114,2.21435195506795,5.28630614529807,4.32021363287205,5.8544722884051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| |phase1_expression=12.0111635328595,1.39590163055744,4.09499315450582,0.30246421130683,0.500895729946347,2.51818907867835,1.86890112476421,1.42035655785734,0.563154888606667,0.70219357896598,0.171217968225505,0.319088635981346,0.513602189793617,1.22388563386596,1.66554880907831,0.809901069559304,0,1.26184866143295,1.50825876966313,2.54633791078818,3.23164502574065,3.07801948722744,6.00759515019551,1.75991665072747,1.14704640533585,2.8711598205751,2.58457197695445,2.37018355954478,1.52018735565099,0.252030129759931,0.665191531965914,0,0.61506478758457,0,1.1554064790051,1.66234645358492,0.408338712524738,3.34825304589526,1.5626706890476,2.09409497589519,5.88231488031014,4.09827290975067,5.34061388334269,7.1761186246079,6.89363132292699,10.2786181210542,18.7773922643529,8.28495594245697,10.5449367712546,11.2769341463084,15.2585199571645,10.062679505548,0.838913030288682,3.62681071005672,1.68046899571232,14.1492689819771,8.88253663810146,10.8291139378263,8.49729135610311,10.0508286061686,8.87363964908651,10.8430250262122,8.00365316500025,4.49949858640699,7.9109309005358,4.2628806896766,10.4860038681442,8.4528027170742,7.46565208621039,7.42532660824299,6.30974884054146,6.85562362569129,9.05561017901615,4.16468717330844,5.07980996396653,9.19218786610021,4.40463523997555,3.06449611404451,2.91852413186863,10.6827893061457,8.59983849862651,9.89735404057844,3.90856198601933,3.93933827022176,4.73674568108111,7.07108605136802,7.11858403995515,7.08317894136142,4.99792875999015,5.7434385681157,7.53647670624362,8.60423876981386,2.03991400112325,1.61910957491345,3.24888208723835,1.34408066129201,0.983110940922263,9.03280709663706,5.19572009205738,8.83348936275851,8.45060518660083,10.2661181931454,33.1246811618639,56.8853362522665,1.94841936910093,0.506719730950197,0.505524445014783,2.51204535381932,1.55362730188303,4.89859058913922,4.68410382268567,3.34912026143355,3.68984795609694,4.6724018571313,5.52666923537813,3.89566433121994,2.96633961281249,2.74738778147832,1.76922110389975,4.52947179852746,1.54589062922275,2.90925151881133,0,2.04946557908083,2.30391377494801,1.53274233125155,2.51611761462433,2.99951365496704,3.30382590389968,3.89455662452539,4.11750542536764,6.28271760564322,2.25971616249959,2.04572365864264,4.36354893575076,4.05603157669394,12.0170449343373,3.11017426525233,1.26361379216837,0.841767423545896,4.81445638962004,6.43725892413724,6.48223667299257,6.32960234910003,5.10273743634959,5.50888997224854,6.65282244374075,1.81092359517311,3.66465587985832,3.78212160335639,7.38994721488585,7.89104636739269,8.61946472599353,6.61679116392116,5.55611768301447,5.57295947091781,0.702213187313235,1.28673953557358,3.6941254921427,3.72826390563903,4.69052119962192,4.8616756594474,4.02466050494857,5.70616272067471,5.09081472528348,3.48800917125612,3.75582761959467,4.90414437942112,3.12663714835613,3.77585167381919,3.08061476274252,2.92399974850665,1.75640092232841,1.8788898626452,2.52347938276953,8.74689205223918,0.991256348951394,0.528901133327089,3.41261200856374,3.48355007790658,3.22168653305233,4.63872106633688,3.11329261382818,3.23383564391351,1.42358718463353,2.79988223030818,2.5133520880027,1.98956472041151,3.50935356814416,1.79763881730844,1.51296634912286,2.38969527905241,2.84501851429623,5.9409226557059,9.01661885384643,4.2766778847516,3.87904974335251,5.40045813155453,5.75452487830741,2.06654207171443,2.35498091762062,2.22114895059241,2.66807364378434,1.33476084572875,1.37591296579242,1.12431056192427,0.608580364165509,1.4470629585145,1.52775511068852,2.01387296215567,1.62135226775035,1.92192989231657,5.75072826109418,1.86070473834252,5.30464044294753,3.03094653536534,1.07638448113147,3.85954817090694,3.51031061316549,5.11626811780309,6.19266910479698,6.62005834523234,6.57132695207806,5.19269398069629,4.76087281772027,9.95181604074774,10.0886492227962,8.858587585951,11.0023790373666,4.09658286789345,3.10832967358612,3.7608755231193,1.50791283939272,3.26343410291226,1.47529281905711,2.20749397043786,1.60550589987792,3.7507739709505,5.40985319743029,0.504941854408746,9.4652465824877,6.63745865304285,7.97066571611356,8.84184552424442,9.80314165962534,7.35998980050964,6.47697122679831,9.9366991689846,5.92931666919785,3.85585579706168,2.98074178937364,10.5058706163681,10.750539317336,4.12425307431339,3.98235415019888,3.8844901784797,1.81394134178851,2.82907619633847,2.36241514304618,3.3817866273832,7.23599220871019,3.27180356529755,3.92147116223193,1.26414703174326,1.05418608574999,0,2.7235168460303,4.14140516272013,5.56242340265844,7.50179622610573,5.32020700926821,7.66985915688903,7.89835298890181,7.30715877875038,3.52007562095566,2.75381692122966,1.98475558249466,3.46261131177108,3.71368181400583,3.43783672090488,2.74556391207214,3.28281799490123,3.78925087618806,1.48340241608408,2.22132145037209,6.60437977482312,3.1483069652851,1.50694765603753,1.50363650493128,1.60144721244566,2.71965487990169,3.63873776041511,3.59319931891502,0.954670618015114,2.21435195506795,5.28630614529807,4.32021363287205,5.8544722884051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| ||
|short_description=p2@Ptpn9 | |short_description=p2@Ptpn9 | ||
}} | }} |
Latest revision as of 21:20, 26 September 2015
Short description: | p2@Ptpn9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptpn9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1016 |
Association with transcript: | 109bp_to_ENSMUST00000034832, NM_019651, uc009ptt.1_5end |
EntrezGene: | Ptpn9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.05e-15 | 44 |
neurectodermal cell | 3.05e-15 | 44 |
neural cell | 8.86e-15 | 43 |
electrically responsive cell | 5.03e-13 | 39 |
electrically active cell | 5.03e-13 | 39 |
neuron | 4.78e-10 | 33 |
neuronal stem cell | 4.78e-10 | 33 |
neuroblast | 4.78e-10 | 33 |
electrically signaling cell | 4.78e-10 | 33 |
embryonic cell | 5.91e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.55e-10 | 75 |
central nervous system | 3.05e-10 | 73 |
ectoderm-derived structure | 6.72e-09 | 95 |
ectoderm | 6.72e-09 | 95 |
presumptive ectoderm | 6.72e-09 | 95 |
structure with developmental contribution from neural crest | 9.94e-07 | 92 |