FFCP PHASE1:Mm9::chr9:56842884..56842924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56294 | |EntrezGene=56294 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1016 | |||
|TSSclassifier=NA | |||
|UniProt=O35239,Q2M4G8 | |UniProt=O35239,Q2M4G8 | ||
|association_with_transcript=109bp_to_ENSMUST00000034832,NM_019651,uc009ptt.1_5end | |association_with_transcript=109bp_to_ENSMUST00000034832,NM_019651,uc009ptt.1_5end | ||
|cluster_id=chr9:56842884..56842924,+ | |||
|description=CAGE_peak_2_at_Ptpn9_5end | |description=CAGE_peak_2_at_Ptpn9_5end | ||
|id=chr9:56842884..56842924,+ | |id=chr9:56842884..56842924,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.75e-18!50;CL:0000221!3.10e-15!44;CL:0000133!3.10e-15!44;CL:0002319!8.99e-15!43;CL:0000393!5.10e-13!39;CL:0000211!5.10e-13!39;CL:0000540!4.83e-10!33;CL:0000047!4.83e-10!33;CL:0000031!4.83e-10!33;CL:0000404!4.83e-10!33;CL:0002321!6.61e-10!70;CL:0000220!6.61e-10!70 | |ontology_enrichment_celltype=CL:0000055!1.75e-18!50;CL:0000221!3.10e-15!44;CL:0000133!3.10e-15!44;CL:0002319!8.99e-15!43;CL:0000393!5.10e-13!39;CL:0000211!5.10e-13!39;CL:0000540!4.83e-10!33;CL:0000047!4.83e-10!33;CL:0000031!4.83e-10!33;CL:0000404!4.83e-10!33;CL:0002321!6.61e-10!70;CL:0000220!6.61e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.05e-15,44;CL:0000133,3.05e-15,44;CL:0002319,8.86e-15,43;CL:0000393,5.03e-13,39;CL:0000211,5.03e-13,39;CL:0000540,4.78e-10,33;CL:0000047,4.78e-10,33;CL:0000031,4.78e-10,33;CL:0000404,4.78e-10,33;CL:0002321,5.91e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.57e-10!75;UBERON:0001016!1.57e-10!75;UBERON:0001017!3.08e-10!73;UBERON:0005743!3.08e-10!73;UBERON:0004121!4.00e-09!102;UBERON:0000924!4.00e-09!102;UBERON:0006601!4.00e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.55e-10,75;UBERON:0001017,3.05e-10,73;UBERON:0004121,6.72e-09,95;UBERON:0000924,6.72e-09,95;UBERON:0006601,6.72e-09,95;UBERON:0010314,9.94e-07,92 | |||
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| ||
|short_description=p2@Ptpn9 | |short_description=p2@Ptpn9 | ||
}} | }} |
Latest revision as of 21:20, 26 September 2015
Short description: | p2@Ptpn9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptpn9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1016 |
Association with transcript: | 109bp_to_ENSMUST00000034832, NM_019651, uc009ptt.1_5end |
EntrezGene: | Ptpn9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.05e-15 | 44 |
neurectodermal cell | 3.05e-15 | 44 |
neural cell | 8.86e-15 | 43 |
electrically responsive cell | 5.03e-13 | 39 |
electrically active cell | 5.03e-13 | 39 |
neuron | 4.78e-10 | 33 |
neuronal stem cell | 4.78e-10 | 33 |
neuroblast | 4.78e-10 | 33 |
electrically signaling cell | 4.78e-10 | 33 |
embryonic cell | 5.91e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.55e-10 | 75 |
central nervous system | 3.05e-10 | 73 |
ectoderm-derived structure | 6.72e-09 | 95 |
ectoderm | 6.72e-09 | 95 |
presumptive ectoderm | 6.72e-09 | 95 |
structure with developmental contribution from neural crest | 9.94e-07 | 92 |