FFCP PHASE1:Mm9::chr17:75864618..75864629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240168 | |EntrezGene=240168 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NZH9,F6WF76 | |UniProt=Q6NZH9,F6WF76 | ||
|association_with_transcript=-248bp_to_ENSMUST00000095204,ENSMUST00000167341,NM_207246,uc008dop.2_5end | |association_with_transcript=-248bp_to_ENSMUST00000095204,ENSMUST00000167341,NM_207246,uc008dop.2_5end | ||
|cluster_id=chr17:75864618..75864629,+ | |||
|description=CAGE_peak_8_at_Rasgrp3_5end | |description=CAGE_peak_8_at_Rasgrp3_5end | ||
|id=chr17:75864618..75864629,+ | |id=chr17:75864618..75864629,+ | ||
|ontology_enrichment_celltype=CL:0000553!2.57e-09!6;CL:0000556!2.57e-09!6 | |ontology_enrichment_celltype=CL:0000553!2.57e-09!6;CL:0000556!2.57e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.27e-16,6;CL:0000556,3.27e-16,6;CL:0000050,6.81e-11,9;CL:0000682,4.94e-09,3;CL:0000839,1.34e-07,13;CL:0000945,2.79e-07,1;CL:0000236,2.79e-07,1;CL:0000826,2.79e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002529!1.89e-08!6;UBERON:0002193!1.75e-07!48;UBERON:0007823!3.42e-07!5;UBERON:0005418!5.20e-07!5;UBERON:0002472!5.20e-07!5;UBERON:0008784!5.20e-07!5;UBERON:0006058!5.20e-07!5;UBERON:0004709!5.20e-07!5;UBERON:0005420!5.20e-07!5;UBERON:0006057!5.20e-07!5;UBERON:0000978!5.20e-07!5;UBERON:0002103!5.20e-07!5;UBERON:0000376!5.20e-07!5;UBERON:0000154!5.20e-07!5;UBERON:0005730!5.20e-07!5 | |ontology_enrichment_uberon=UBERON:0002529!1.89e-08!6;UBERON:0002193!1.75e-07!48;UBERON:0007823!3.42e-07!5;UBERON:0005418!5.20e-07!5;UBERON:0002472!5.20e-07!5;UBERON:0008784!5.20e-07!5;UBERON:0006058!5.20e-07!5;UBERON:0004709!5.20e-07!5;UBERON:0005420!5.20e-07!5;UBERON:0006057!5.20e-07!5;UBERON:0000978!5.20e-07!5;UBERON:0002103!5.20e-07!5;UBERON:0000376!5.20e-07!5;UBERON:0000154!5.20e-07!5;UBERON:0005730!5.20e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.18e-19,3;UBERON:0001962,4.84e-13,2;UBERON:0001961,4.84e-13,2;UBERON:0001744,4.84e-13,2;UBERON:0002193,3.22e-11,48;UBERON:0002405,3.22e-11,48;UBERON:0002106,3.48e-09,6;UBERON:0004457,3.48e-09,6;UBERON:0000042,3.48e-09,6;UBERON:0004854,3.48e-09,6;UBERON:0009034,3.48e-09,6;UBERON:0002095,3.48e-09,6;UBERON:0004782,3.48e-09,6;UBERON:0003281,3.48e-09,6;UBERON:0009664,3.48e-09,6;UBERON:0002296,3.48e-09,6;UBERON:0005602,3.48e-09,6;UBERON:0001179,3.48e-09,6;UBERON:0006293,3.48e-09,6;UBERON:0004923,2.05e-08,24;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0003199,3.20e-07,1;UBERON:0001374,8.26e-07,1;UBERON:0004252,8.26e-07,1;UBERON:0003663,8.26e-07,1;UBERON:0005090,8.26e-07,1;UBERON:0001630,8.26e-07,1;UBERON:0003661,8.26e-07,1;UBERON:0010890,8.26e-07,1;UBERON:0001383,8.26e-07,1 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,4.88966356305268,4.79900517620086,1.27316895539409,0.0850432901510698,0,0,2.87986361028132,2.06468352960453,0.57423196411502,2.58457197695445,2.37018355954478,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,2.34895648480831,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.99132285847364,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,1.02522528478712,0,0.370389054739423,0,1.50363650493128,1.37266903923914,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.288635524920988,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,4.88966356305268,4.79900517620086,1.27316895539409,0.0850432901510698,0,0,2.87986361028132,2.06468352960453,0.57423196411502,2.58457197695445,2.37018355954478,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,2.34895648480831,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.99132285847364,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,1.02522528478712,0,0.370389054739423,0,1.50363650493128,1.37266903923914,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.288635524920988,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@Rasgrp3 | |short_description=p8@Rasgrp3 | ||
}} | }} |
Latest revision as of 21:28, 26 September 2015
Short description: | p8@Rasgrp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rasgrp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -248bp_to_ENSMUST00000095204, ENSMUST00000167341, NM_207246, uc008dop.2_5end |
EntrezGene: | Rasgrp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.27e-16 | 6 |
megakaryocyte | 3.27e-16 | 6 |
megakaryocyte-erythroid progenitor cell | 6.81e-11 | 9 |
M cell of gut | 4.94e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 13 |
lymphocyte of B lineage | 2.79e-07 | 1 |
B cell | 2.79e-07 | 1 |
pro-B cell | 2.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.18e-19 | 3 |
gut-associated lymphoid tissue | 4.84e-13 | 2 |
mucosa-associated lymphoid tissue | 4.84e-13 | 2 |
lymphoid tissue | 4.84e-13 | 2 |
hemolymphoid system | 3.22e-11 | 48 |
immune system | 3.22e-11 | 48 |
spleen | 3.48e-09 | 6 |
cavity lining | 3.48e-09 | 6 |
serous membrane | 3.48e-09 | 6 |
gastrointestinal system mesentery | 3.48e-09 | 6 |
stomach region | 3.48e-09 | 6 |
mesentery | 3.48e-09 | 6 |
gastrointestinal system serosa | 3.48e-09 | 6 |
mesentery of stomach | 3.48e-09 | 6 |
gut mesentery | 3.48e-09 | 6 |
dorsal mesentery | 3.48e-09 | 6 |
dorsal mesogastrium | 3.48e-09 | 6 |
peritoneal cavity | 3.48e-09 | 6 |
spleen primordium | 3.48e-09 | 6 |
organ component layer | 2.05e-08 | 24 |
lymph node | 1.20e-07 | 1 |
axillary lymph node | 1.20e-07 | 1 |
peripheral lymph node | 1.20e-07 | 1 |
shoulder | 1.20e-07 | 1 |
egg chamber | 3.20e-07 | 1 |
biceps femoris | 8.26e-07 | 1 |
hindlimb stylopod muscle | 8.26e-07 | 1 |
hindlimb muscle | 8.26e-07 | 1 |
muscle structure | 8.26e-07 | 1 |
muscle organ | 8.26e-07 | 1 |
limb muscle | 8.26e-07 | 1 |
pelvic complex muscle | 8.26e-07 | 1 |
muscle of leg | 8.26e-07 | 1 |