FFCP PHASE1:Mm9::chr15:63891889..63891997,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:63891889..63891997,-
|short_description=p2@Fam49b
|description=CAGE_peak_2_at_Fam49b_5end
|association_with_transcript=12bp_to_ENSMUST00000063838,NM_14484...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223601 | |EntrezGene=223601 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q921M7 | |UniProt=Q921M7 | ||
|association_with_transcript=12bp_to_ENSMUST00000063838,NM_144846,uc007vzf.2,uc007vzg.2_5end | |||
|cluster_id=chr15:63891889..63891997,- | |||
|description=CAGE_peak_2_at_Fam49b_5end | |||
|id=chr15:63891889..63891997,- | |||
|ontology_enrichment_celltype=CL:0000988!7.50e-10!32;CL:0002032!7.50e-10!32;CL:0000037!7.50e-10!32;CL:0000566!7.50e-10!32;CL:0000837!7.50e-10!32;CL:0000738!1.52e-07!17;CL:0002087!1.52e-07!17;CL:0000838!3.01e-07!12;CL:0002031!4.56e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.05e-10,32;CL:0002032,7.05e-10,32;CL:0000037,7.05e-10,32;CL:0000837,7.05e-10,32;CL:0000738,1.52e-07,17;CL:0002087,1.52e-07,17;CL:0000838,3.01e-07,12;CL:0002031,4.31e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.82e-19,48;UBERON:0002405,6.82e-19,48;UBERON:0002390,1.85e-17,45;UBERON:0003061,1.85e-17,45;UBERON:0004177,1.92e-10,29;UBERON:0005057,1.92e-10,29;UBERON:0000077,6.23e-10,35;UBERON:0001004,2.59e-08,42;UBERON:0003408,3.58e-08,24;UBERON:0000065,4.75e-08,41;UBERON:0002371,6.37e-08,16;UBERON:0002370,6.54e-08,23;UBERON:0000974,6.54e-08,23;UBERON:0004807,6.54e-08,23;UBERON:0005058,6.54e-08,23;UBERON:0003351,6.54e-08,23;UBERON:0009113,6.54e-08,23;UBERON:0003295,6.54e-08,23;UBERON:0009722,6.54e-08,23;UBERON:0005562,6.54e-08,23;UBERON:0007690,6.54e-08,23;UBERON:0001474,1.39e-07,22;UBERON:0004765,1.39e-07,22;UBERON:0001434,1.39e-07,22;UBERON:0003081,1.59e-07,87;UBERON:0006562,2.41e-07,24;UBERON:0001557,2.41e-07,24;UBERON:0001042,2.41e-07,24;UBERON:0008814,2.41e-07,24;UBERON:0009145,2.41e-07,24;UBERON:0000072,9.96e-07,27 | |||
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| ||
|short_description=p2@Fam49b | |||
}} | }} |
Latest revision as of 21:31, 26 September 2015
Short description: | p2@Fam49b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam49b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 12bp_to_ENSMUST00000063838, NM_144846, uc007vzf.2, uc007vzg.2_5end |
EntrezGene: | Fam49b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.05e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.05e-10 | 32 |
hematopoietic stem cell | 7.05e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.05e-10 | 32 |
leukocyte | 1.52e-07 | 17 |
nongranular leukocyte | 1.52e-07 | 17 |
lymphoid lineage restricted progenitor cell | 3.01e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 4.31e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.82e-19 | 48 |
immune system | 6.82e-19 | 48 |
hematopoietic system | 1.85e-17 | 45 |
blood island | 1.85e-17 | 45 |
hemopoietic organ | 1.92e-10 | 29 |
immune organ | 1.92e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 6.23e-10 | 35 |
respiratory system | 2.59e-08 | 42 |
gland of gut | 3.58e-08 | 24 |
respiratory tract | 4.75e-08 | 41 |
bone marrow | 6.37e-08 | 16 |
thymus | 6.54e-08 | 23 |
neck | 6.54e-08 | 23 |
respiratory system epithelium | 6.54e-08 | 23 |
hemolymphoid system gland | 6.54e-08 | 23 |
pharyngeal epithelium | 6.54e-08 | 23 |
thymic region | 6.54e-08 | 23 |
pharyngeal gland | 6.54e-08 | 23 |
entire pharyngeal arch endoderm | 6.54e-08 | 23 |
thymus primordium | 6.54e-08 | 23 |
early pharyngeal endoderm | 6.54e-08 | 23 |
bone element | 1.39e-07 | 22 |
skeletal element | 1.39e-07 | 22 |
skeletal system | 1.39e-07 | 22 |
lateral plate mesoderm | 1.59e-07 | 87 |
pharynx | 2.41e-07 | 24 |
upper respiratory tract | 2.41e-07 | 24 |
chordate pharynx | 2.41e-07 | 24 |
pharyngeal arch system | 2.41e-07 | 24 |
pharyngeal region of foregut | 2.41e-07 | 24 |
segment of respiratory tract | 9.96e-07 | 27 |